Multiple platform build/check report for BioC 3.21 - CHECK results for graper on palomino7

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences"	4752
palomino7	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences"	4466
lconway	macOS 12.7.1 Monterey	x86_64	R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences"	4420
kjohnson3	macOS 13.7.1 Ventura	arm64	R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences"	4375
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on palomino7

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.23.0

Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings graper_1.23.0.tar.gz

StartedAt: 2024-12-17 01:24:26 -0500 (Tue, 17 Dec 2024)

EndedAt: 2024-12-17 01:25:55 -0500 (Tue, 17 Dec 2024)

EllapsedTime: 88.8 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings graper_1.23.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck'
* using R Under development (unstable) (2024-10-26 r87273 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'graper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graper' version '1.23.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graper' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 13.3.0'
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'E:/biocbuild/bbs-3.21-bioc/R/library/graper/libs/x64/graper.dll':
  Found '_exit', possibly from '_exit' (C)
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'E:/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log'
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library'
* installing *source* package 'graper' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.3.0'
using C++11
g++  -std=gnu++11 -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppArmadillo/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign   -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppArmadillo/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign   -c fit_graper.cpp -o fit_graper.o
In file included from E:/biocbuild/bbs-3.21-bioc/R/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from E:/biocbuild/bbs-3.21-bioc/R/library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from E:/biocbuild/bbs-3.21-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
E:/biocbuild/bbs-3.21-bioc/R/library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lRlapack -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR
installing to E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-graper/00new/graper/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.715
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-553.503
ELB improved by 317.212

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.683
ELB improved by 56.8193

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.037
ELB improved by 30.6459

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.676
ELB improved by 11.3618

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.396
ELB improved by 5.27929

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.46
ELB improved by 3.93606

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.002
ELB improved by 3.45831

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.76
ELB improved by 3.24199

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.652
ELB improved by 3.10825

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.657
ELB improved by 2.99496

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.784
ELB improved by 2.87252

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.081
ELB improved by 2.70339

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.641
ELB improved by 2.43931

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.581
ELB improved by 2.06087

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.959
ELB improved by 1.62145

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.745
ELB improved by 1.21435

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.853
ELB improved by 0.891728

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.201
ELB improved by 0.652087

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.721
ELB improved by 0.479985

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.359
ELB improved by 0.361945

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.076
ELB improved by 0.283547

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.844
ELB improved by 0.231096

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.65
ELB improved by 0.194654

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.482
ELB improved by 0.168109

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.334
ELB improved by 0.147906

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.202
ELB improved by 0.131959

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.083
ELB improved by 0.119009

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.975
ELB improved by 0.108266

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.875
ELB improved by 0.0992168

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.784
ELB improved by 0.0915097

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.699
ELB improved by 0.0848953

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.62
ELB improved by 0.0791882

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.545
ELB improved by 0.0742457

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.476
ELB improved by 0.0699551

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.409
ELB improved by 0.0662253

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.346
ELB improved by 0.0629815

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.286
ELB improved by 0.0601619

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.228
ELB improved by 0.0577146

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.173
ELB improved by 0.0555958

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.119
ELB improved by 0.0537686

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.067
ELB improved by 0.0522016

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.016
ELB improved by 0.0508682

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.966
ELB improved by 0.0497457

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.917
ELB improved by 0.0488152

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.869
ELB improved by 0.0480613

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.822
ELB improved by 0.0474715

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.775
ELB improved by 0.0470364

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.728
ELB improved by 0.0467498

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.682
ELB improved by 0.0466084

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.635
ELB improved by 0.0466125

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.588
ELB improved by 0.0467657

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.541
ELB improved by 0.0470755

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.494
ELB improved by 0.0475534

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.445
ELB improved by 0.0482157

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.396
ELB improved by 0.0490838

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.346
ELB improved by 0.0501849

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.294
ELB improved by 0.051553

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.241
ELB improved by 0.0532305

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.186
ELB improved by 0.0552691

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.128
ELB improved by 0.0577329

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.068
ELB improved by 0.0607008

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.003
ELB improved by 0.0642703

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.935
ELB improved by 0.0685639

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.861
ELB improved by 0.0737353

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.781
ELB improved by 0.0799804

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.693
ELB improved by 0.0875502

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.597
ELB improved by 0.0967686

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.489
ELB improved by 0.108053

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.367
ELB improved by 0.121937

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.228
ELB improved by 0.139073

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.067
ELB improved by 0.160193

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.881
ELB improved by 0.185935

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.665
ELB improved by 0.216458

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.414
ELB improved by 0.250806

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.128
ELB improved by 0.286417

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.808
ELB improved by 0.319465

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.462
ELB improved by 0.346249

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.098
ELB improved by 0.364402

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.725
ELB improved by 0.373011

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.352
ELB improved by 0.372256

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.989
ELB improved by 0.363315

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.641
ELB improved by 0.34828

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.311
ELB improved by 0.3298

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.001
ELB improved by 0.310467

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.708
ELB improved by 0.292108

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.433
ELB improved by 0.275026

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.176
ELB improved by 0.257153

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.942
ELB improved by 0.233967

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.74
ELB improved by 0.20184

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.577
ELB improved by 0.163442

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.45
ELB improved by 0.126518

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.354
ELB improved by 0.0968779

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.278
ELB improved by 0.0760104

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.214
ELB improved by 0.0635113

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.155
ELB improved by 0.0595004

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.089
ELB improved by 0.0658824

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.002
ELB improved by 0.0865653

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.878
ELB improved by 0.12447

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.707
ELB improved by 0.1702

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.517
ELB improved by 0.189991

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.358
ELB improved by 0.159158

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.246
ELB improved by 0.111874

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.162
ELB improved by 0.0840578

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.088
ELB improved by 0.0745707

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.012
ELB improved by 0.0762023

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.927
ELB improved by 0.0843205

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.836
ELB improved by 0.0917243

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.746
ELB improved by 0.089124

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.672
ELB improved by 0.0741995

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.618
ELB improved by 0.0544825

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.58
ELB improved by 0.0376858

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.554
ELB improved by 0.0260602

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.535
ELB improved by 0.0186231

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.522
ELB improved by 0.0138786

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.511
ELB improved by 0.0107438

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.502
ELB improved by 0.00857401

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.858
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.907
ELB improved by 291.95

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.128
ELB improved by 58.7789

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.476
ELB improved by 43.6523

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.599
ELB improved by 20.8768

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.652
ELB improved by 7.94774

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.525
ELB improved by 4.1262

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.384
ELB improved by 3.14191

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.355
ELB improved by 3.02847

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.114
ELB improved by 3.24065

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.507
ELB improved by 3.60737

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.482
ELB improved by 4.02497

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.144
ELB improved by 4.33781

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.826
ELB improved by 4.31875

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.997
ELB improved by 3.82878

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.969
ELB improved by 3.0275

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.719
ELB improved by 2.25039

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.054
ELB improved by 1.66475

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.831
ELB improved by 1.22326

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.944
ELB improved by 0.88703

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.283
ELB improved by 0.66064

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.763
ELB improved by 0.520332

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.33
ELB improved by 0.43311

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.954
ELB improved by 0.376225

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.617
ELB improved by 0.336627

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.31
ELB improved by 0.307116

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.026
ELB improved by 0.283686

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.762
ELB improved by 0.26405

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.515
ELB improved by 0.246843

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.284
ELB improved by 0.231185

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.068
ELB improved by 0.21646

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.865
ELB improved by 0.202221

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.677
ELB improved by 0.188194

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.503
ELB improved by 0.174297

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.342
ELB improved by 0.160618

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.195
ELB improved by 0.147343

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.06
ELB improved by 0.134671

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.937
ELB improved by 0.122764

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.826
ELB improved by 0.111724

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.724
ELB improved by 0.101606

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.632
ELB improved by 0.0924239

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.548
ELB improved by 0.0841744

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.471
ELB improved by 0.0768448

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.4
ELB improved by 0.0704275

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.335
ELB improved by 0.0649352

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.275
ELB improved by 0.0604219

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.218
ELB improved by 0.0570175

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.163
ELB improved by 0.054986

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.108
ELB improved by 0.0548181

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.051
ELB improved by 0.0573567

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.987
ELB improved by 0.0638472

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.911
ELB improved by 0.0754776

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.82
ELB improved by 0.0914952

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.714
ELB improved by 0.106219

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.603
ELB improved by 0.110721

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.5
ELB improved by 0.102774

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.41
ELB improved by 0.0899005

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.331
ELB improved by 0.0796666

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.256
ELB improved by 0.0746889

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.181
ELB improved by 0.0751693

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.099
ELB improved by 0.0816079

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.003
ELB improved by 0.0958048

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.883
ELB improved by 0.120156

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.73
ELB improved by 0.153188

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.548
ELB improved by 0.181884

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.36
ELB improved by 0.188143

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.187
ELB improved by 0.173023

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.034
ELB improved by 0.153006

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.896
ELB improved by 0.137698

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.768
ELB improved by 0.127876

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.647
ELB improved by 0.121762

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.529
ELB improved by 0.117738

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.414
ELB improved by 0.114702

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.302
ELB improved by 0.111905

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.193
ELB improved by 0.108809

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.088
ELB improved by 0.105023

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.988
ELB improved by 0.100298

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.894
ELB improved by 0.0945344

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.806
ELB improved by 0.0877864

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.726
ELB improved by 0.0802432

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.653
ELB improved by 0.0721893

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.589
ELB improved by 0.0639523

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.534
ELB improved by 0.0558503

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.485
ELB improved by 0.0481524

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.444
ELB improved by 0.0410573

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.41
ELB improved by 0.0346883

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.381
ELB improved by 0.0291009

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.356
ELB improved by 0.0242957

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.336
ELB improved by 0.0202338

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.319
ELB improved by 0.0168505

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.305
ELB improved by 0.0140674

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.293
ELB improved by 0.0118014

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.283
ELB improved by 0.00997097

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.786
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-603.209
ELB improved by 281.577

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-546.366
ELB improved by 56.843

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.392
ELB improved by 43.9734

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.766
ELB improved by 23.6267

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.485
ELB improved by 10.2805

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.604
ELB improved by 5.88143

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.855
ELB improved by 4.74858

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.295
ELB improved by 4.56072

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.613
ELB improved by 4.68141

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.79
ELB improved by 4.82291

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.991
ELB improved by 4.79891

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.576
ELB improved by 4.41493

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.963
ELB improved by 3.6135

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.256
ELB improved by 2.70672

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.214
ELB improved by 2.04261

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.459
ELB improved by 1.75468

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.868
ELB improved by 1.59097

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.664
ELB improved by 1.20371

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.842
ELB improved by 0.822214

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.248
ELB improved by 0.59424

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.781
ELB improved by 0.466805

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.39
ELB improved by 0.39136

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.046
ELB improved by 0.343644

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.734
ELB improved by 0.311962

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.444
ELB improved by 0.290319

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.168
ELB improved by 0.275374

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.903
ELB improved by 0.265134

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.645
ELB improved by 0.25836

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.39
ELB improved by 0.254286

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.138
ELB improved by 0.252464

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.885
ELB improved by 0.252671

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.631
ELB improved by 0.254843

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.371
ELB improved by 0.259021

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.106
ELB improved by 0.26529

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.832
ELB improved by 0.273731

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.548
ELB improved by 0.284354

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.251
ELB improved by 0.297042

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.94
ELB improved by 0.311485

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.612
ELB improved by 0.327138

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.269
ELB improved by 0.343194

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.911
ELB improved by 0.358613

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.538
ELB improved by 0.372216

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.156
ELB improved by 0.382837

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.766
ELB improved by 0.389522

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.374
ELB improved by 0.391701

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.985
ELB improved by 0.389295

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.602
ELB improved by 0.382685

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.23
ELB improved by 0.372547

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.87
ELB improved by 0.359578

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.526
ELB improved by 0.344216

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.2
ELB improved by 0.326533

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.893
ELB improved by 0.306418

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.609
ELB improved by 0.283979

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.349
ELB improved by 0.259868

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.114
ELB improved by 0.235277

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.902
ELB improved by 0.211613

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.712
ELB improved by 0.190152

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.54
ELB improved by 0.171836

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.383
ELB improved by 0.157271

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.236
ELB improved by 0.1468

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.096
ELB improved by 0.140588

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.957
ELB improved by 0.138826

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.815
ELB improved by 0.142322

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.662
ELB improved by 0.153037

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.49
ELB improved by 0.171031

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.307
ELB improved by 0.183004

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.143
ELB improved by 0.164747

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.014
ELB improved by 0.128465

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.896
ELB improved by 0.11817

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.742
ELB improved by 0.154209

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.508
ELB improved by 0.234397

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.195
ELB improved by 0.312701

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.888
ELB improved by 0.306676

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.218504

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.543
ELB improved by 0.126482

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.474
ELB improved by 0.0689548

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.435
ELB improved by 0.0393481

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.41
ELB improved by 0.0247523

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.393
ELB improved by 0.0172935

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.38
ELB improved by 0.0131624

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.369
ELB improved by 0.010637

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.36
ELB improved by 0.0089413

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.255
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.722
ELB improved by 278.533

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.018
ELB improved by 59.7033

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.151
ELB improved by 40.867

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.937
ELB improved by 17.2144

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.751
ELB improved by 6.18561

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.505
ELB improved by 3.24628

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.132
ELB improved by 2.37289

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.087
ELB improved by 2.04556

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.21
ELB improved by 1.87648

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.454
ELB improved by 1.75575

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.801
ELB improved by 1.65367

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.238
ELB improved by 1.56256

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.758
ELB improved by 1.47975

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.357
ELB improved by 1.4015

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.037
ELB improved by 1.31984

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.814
ELB improved by 1.2234

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.71
ELB improved by 1.10408

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.746
ELB improved by 0.96409

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.93
ELB improved by 0.815392

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.257
ELB improved by 0.672808

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.71
ELB improved by 0.547187

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.267
ELB improved by 0.443003

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.907
ELB improved by 0.360214

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.61
ELB improved by 0.296867

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.36
ELB improved by 0.250206

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.143
ELB improved by 0.21697

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.949
ELB improved by 0.193879

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.771
ELB improved by 0.178146

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.603
ELB improved by 0.167689

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.442
ELB improved by 0.161078

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.285
ELB improved by 0.157369

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.129
ELB improved by 0.155953

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.972
ELB improved by 0.156431

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.814
ELB improved by 0.15855

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.652
ELB improved by 0.162155

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.485
ELB improved by 0.16718

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.311
ELB improved by 0.173658

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.129
ELB improved by 0.18177

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.937
ELB improved by 0.191941

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.732
ELB improved by 0.205035

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.509
ELB improved by 0.222691

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.262
ELB improved by 0.247885

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.976
ELB improved by 0.285474

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.635
ELB improved by 0.341213

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.22
ELB improved by 0.414441

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.737
ELB improved by 0.483178

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.226
ELB improved by 0.5111

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.731
ELB improved by 0.494807

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.267
ELB improved by 0.464454

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.829
ELB improved by 0.43825

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.41
ELB improved by 0.418295

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.008
ELB improved by 0.40251

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.62
ELB improved by 0.387581

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.25
ELB improved by 0.369975

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.902
ELB improved by 0.348433

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.577
ELB improved by 0.324521

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.277
ELB improved by 0.300474

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.999
ELB improved by 0.277683

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.742
ELB improved by 0.256687

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.505
ELB improved by 0.237541

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.285
ELB improved by 0.22009

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.081
ELB improved by 0.204146

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 0.189592

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.715
ELB improved by 0.176384

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.55
ELB improved by 0.164492

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.396
ELB improved by 0.153791

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.252
ELB improved by 0.144009

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.118
ELB improved by 0.134758

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.992
ELB improved by 0.125666

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.875
ELB improved by 0.116536

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.768
ELB improved by 0.107447

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.669
ELB improved by 0.0987433

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.578
ELB improved by 0.0909228

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.494
ELB improved by 0.0845025

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.414
ELB improved by 0.0799451

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.336
ELB improved by 0.0776989

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.258
ELB improved by 0.0783769

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.175
ELB improved by 0.0830567

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.081
ELB improved by 0.0935117

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.97
ELB improved by 0.111338

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.837
ELB improved by 0.133398

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.691
ELB improved by 0.145442

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.559
ELB improved by 0.132524

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.456
ELB improved by 0.10207

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.384
ELB improved by 0.0727643

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.331
ELB improved by 0.0524133

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.292
ELB improved by 0.0397062

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.26
ELB improved by 0.0316037

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.234
ELB improved by 0.0259526

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.212
ELB improved by 0.0216001

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.194
ELB improved by 0.0180189

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.179
ELB improved by 0.0150009

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.167
ELB improved by 0.0124738

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.157
ELB improved by 0.0104048

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.148
ELB improved by 0.00875682

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
   2.29    0.25    2.53

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.07	0.02	0.08
getPIPs	0.07	0.01	0.08
graper	0.11	0.00	0.11
makeExampleData	0	0	0
makeExampleDataWithUnequalGroups	0.02	0.02	0.03
plotELBO	0.25	0.03	0.29
plotGroupPenalties	0.90	0.03	0.93
plotPosterior	0.60	0.02	0.61
predict.graper	2.03	0.01	2.06
print.graper	0.05	0.02	0.07