Britta Velten
| Snapshot Date: 2025-09-01 13:45 -0400 (Mon, 01 Sep 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-09-02 12:02 -0400 (Tue, 02 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4824 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4615 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4562 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4541 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 907/2320 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | NA | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-09-01 21:15:02 -0400 (Mon, 01 Sep 2025) |
| EndedAt: 2025-09-01 21:16:13 -0400 (Mon, 01 Sep 2025) |
| EllapsedTime: 71.0 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-856.591
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.071
ELB improved by 301.52
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.681
ELB improved by 57.3897
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.228
ELB improved by 34.4534
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.61
ELB improved by 13.6179
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.581
ELB improved by 5.02841
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.858
ELB improved by 2.72348
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.831
ELB improved by 2.02669
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.028
ELB improved by 1.80309
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.25
ELB improved by 1.77793
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.389
ELB improved by 1.86093
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.368
ELB improved by 2.02117
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.119
ELB improved by 2.24869
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.591
ELB improved by 2.5288
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.773
ELB improved by 2.81785
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.749
ELB improved by 3.02342
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.749
ELB improved by 3.00035
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.118
ELB improved by 2.63106
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.089
ELB improved by 2.02937
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.606
ELB improved by 1.48227
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.478
ELB improved by 1.12847
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.546
ELB improved by 0.932131
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.723
ELB improved by 0.823112
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.967
ELB improved by 0.75602
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.258
ELB improved by 0.70898
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.585
ELB improved by 0.672667
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.942
ELB improved by 0.643057
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.324
ELB improved by 0.617846
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.729
ELB improved by 0.594972
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.157
ELB improved by 0.572167
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.61
ELB improved by 0.547042
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.092
ELB improved by 0.517495
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.61
ELB improved by 0.482282
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.169
ELB improved by 0.441557
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.771
ELB improved by 0.397099
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.419
ELB improved by 0.352102
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.109
ELB improved by 0.310663
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.831
ELB improved by 0.277418
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.573
ELB improved by 0.257784
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.315
ELB improved by 0.258902
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.025
ELB improved by 0.289233
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.675
ELB improved by 0.350341
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.252
ELB improved by 0.423459
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.772
ELB improved by 0.479489
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.287
ELB improved by 0.485216
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.861
ELB improved by 0.425439
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.528
ELB improved by 0.333834
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.287
ELB improved by 0.240869
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.121
ELB improved by 0.166153
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.004
ELB improved by 0.1164
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.917
ELB improved by 0.0870815
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.845
ELB improved by 0.0721396
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.776
ELB improved by 0.0687637
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.697
ELB improved by 0.079448
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.581
ELB improved by 0.115698
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.382
ELB improved by 0.199467
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.064
ELB improved by 0.31773
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.721
ELB improved by 0.342848
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.465
ELB improved by 0.256089
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.266
ELB improved by 0.198584
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.059
ELB improved by 0.207524
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.786
ELB improved by 0.272422
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.432
ELB improved by 0.354693
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.061
ELB improved by 0.370343
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.746
ELB improved by 0.314969
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.504
ELB improved by 0.241877
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.326
ELB improved by 0.178706
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.185
ELB improved by 0.140408
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.061
ELB improved by 0.124167
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.947
ELB improved by 0.114461
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.848
ELB improved by 0.0991725
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.769
ELB improved by 0.0788211
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.709
ELB improved by 0.0601537
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.662
ELB improved by 0.0466909
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.624
ELB improved by 0.0379788
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.591
ELB improved by 0.0323962
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.563
ELB improved by 0.0286316
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.537
ELB improved by 0.0258976
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.513
ELB improved by 0.0237704
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.491
ELB improved by 0.0220267
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.471
ELB improved by 0.0205441
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.451
ELB improved by 0.0192495
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.433
ELB improved by 0.018094
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.416
ELB improved by 0.0170419
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.4
ELB improved by 0.0160649
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.385
ELB improved by 0.0151399
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.371
ELB improved by 0.0142483
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.357
ELB improved by 0.0133758
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.345
ELB improved by 0.0125122
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.333
ELB improved by 0.0116522
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.322
ELB improved by 0.0107957
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.312
ELB improved by 0.00994764
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.442
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.699
ELB improved by 265.743
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.81
ELB improved by 58.8881
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.891
ELB improved by 38.9195
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.243
ELB improved by 19.6485
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.239
ELB improved by 11.0035
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.599
ELB improved by 9.63966
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.501
ELB improved by 11.0988
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.91
ELB improved by 11.5901
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.831
ELB improved by 9.07907
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.261
ELB improved by 5.57015
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.046
ELB improved by 3.21569
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.062
ELB improved by 1.9834
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.733
ELB improved by 1.32904
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.761
ELB improved by 0.971824
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.978
ELB improved by 0.782808
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.289
ELB improved by 0.689727
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.636
ELB improved by 0.652717
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.985
ELB improved by 0.65104
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.311
ELB improved by 0.673896
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.596
ELB improved by 0.715542
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.823
ELB improved by 0.772945
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.978
ELB improved by 0.844474
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.05
ELB improved by 0.928623
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.027
ELB improved by 1.02212
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.91
ELB improved by 1.11746
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.709
ELB improved by 1.20118
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.453
ELB improved by 1.25558
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.188
ELB improved by 1.26495
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.965
ELB improved by 1.22329
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.827
ELB improved by 1.13797
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.795
ELB improved by 1.03184
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.85
ELB improved by 0.944778
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.998
ELB improved by 0.852519
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.362
ELB improved by 0.635843
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.948
ELB improved by 0.414158
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.654
ELB improved by 0.294232
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.418
ELB improved by 0.235794
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.215
ELB improved by 0.202309
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.037
ELB improved by 0.178845
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.876
ELB improved by 0.160169
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.732
ELB improved by 0.144623
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.6
ELB improved by 0.131689
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.479
ELB improved by 0.121118
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.366
ELB improved by 0.112573
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.261
ELB improved by 0.105434
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.162
ELB improved by 0.0988121
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.07
ELB improved by 0.0918831
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.986
ELB improved by 0.0843262
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.91
ELB improved by 0.0763962
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.841
ELB improved by 0.068547
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.78
ELB improved by 0.0610263
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.726
ELB improved by 0.0538044
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.679
ELB improved by 0.046776
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.639
ELB improved by 0.0399727
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.606
ELB improved by 0.0336052
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.578
ELB improved by 0.0279413
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.555
ELB improved by 0.0231576
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.536
ELB improved by 0.019278
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.519
ELB improved by 0.0162077
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.506
ELB improved by 0.0137995
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.494
ELB improved by 0.0119051
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.483
ELB improved by 0.0104
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.474
ELB improved by 0.00918841
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.236
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.213
ELB improved by 310.022
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.167
ELB improved by 60.0463
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.141
ELB improved by 39.0257
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.891
ELB improved by 16.2505
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.739
ELB improved by 6.15138
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.445
ELB improved by 3.29451
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.079
ELB improved by 2.36641
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.114
ELB improved by 1.96435
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.378
ELB improved by 1.73638
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.821
ELB improved by 1.55708
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.432
ELB improved by 1.38856
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.209
ELB improved by 1.22291
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.147
ELB improved by 1.06262
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.234
ELB improved by 0.913085
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.455
ELB improved by 0.779004
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.792
ELB improved by 0.66288
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.227
ELB improved by 0.564936
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.743
ELB improved by 0.483745
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.326
ELB improved by 0.417059
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.963
ELB improved by 0.362438
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.646
ELB improved by 0.317571
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.365
ELB improved by 0.280408
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.116
ELB improved by 0.249271
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.893
ELB improved by 0.222939
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.693
ELB improved by 0.20066
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.511
ELB improved by 0.182018
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.344
ELB improved by 0.166752
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.189
ELB improved by 0.154616
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.044
ELB improved by 0.145339
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.905
ELB improved by 0.138651
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.771
ELB improved by 0.13432
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.639
ELB improved by 0.132184
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.507
ELB improved by 0.13217
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.372
ELB improved by 0.134297
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.234
ELB improved by 0.13868
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.088
ELB improved by 0.145538
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.933
ELB improved by 0.155201
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.765
ELB improved by 0.16813
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.58
ELB improved by 0.184933
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.373
ELB improved by 0.206403
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.14
ELB improved by 0.233554
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.872
ELB improved by 0.267669
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.562
ELB improved by 0.310361
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.198
ELB improved by 0.363627
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.768
ELB improved by 0.429862
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.257
ELB improved by 0.511683
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.645
ELB improved by 0.611244
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.917
ELB improved by 0.728755
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.056
ELB improved by 0.860899
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.054
ELB improved by 1.00133
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.911
ELB improved by 1.1438
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.627
ELB improved by 1.28374
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.211
ELB improved by 1.41582
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.682
ELB improved by 1.52913
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.08
ELB improved by 1.60154
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.481
ELB improved by 1.59938
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.98
ELB improved by 1.50088
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.658
ELB improved by 1.3217
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.567
ELB improved by 1.09189
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.717
ELB improved by 0.84999
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.069
ELB improved by 0.64772
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.56
ELB improved by 0.508798
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.138
ELB improved by 0.422044
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.778
ELB improved by 0.359888
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.482
ELB improved by 0.296163
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.256
ELB improved by 0.225662
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.095
ELB improved by 0.160966
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.984
ELB improved by 0.111103
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.908
ELB improved by 0.0763032
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.855
ELB improved by 0.0532128
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.816
ELB improved by 0.0381928
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.788
ELB improved by 0.0284006
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.766
ELB improved by 0.021912
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.749
ELB improved by 0.0175103
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.734
ELB improved by 0.0144441
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.722
ELB improved by 0.0122485
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.711
ELB improved by 0.0106326
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.702
ELB improved by 0.00941075
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-897.373
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.801
ELB improved by 316.572
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.447
ELB improved by 59.3536
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.792
ELB improved by 38.6546
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.211
ELB improved by 17.5816
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.679
ELB improved by 6.53155
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.803
ELB improved by 3.8765
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.579
ELB improved by 3.22406
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.547
ELB improved by 3.03208
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.538
ELB improved by 3.00887
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.489
ELB improved by 3.04851
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.39
ELB improved by 3.09949
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.293
ELB improved by 3.09637
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.352
ELB improved by 2.94169
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.775
ELB improved by 2.57661
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.718
ELB improved by 2.05698
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.204
ELB improved by 1.5146
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.141
ELB improved by 1.06221
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.402
ELB improved by 0.739798
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.872
ELB improved by 0.529192
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.478
ELB improved by 0.394724
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.17
ELB improved by 0.307325
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.921
ELB improved by 0.24937
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.71
ELB improved by 0.211127
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.523
ELB improved by 0.186524
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.352
ELB improved by 0.171141
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.19
ELB improved by 0.161771
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.034
ELB improved by 0.156271
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.881
ELB improved by 0.153298
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.729
ELB improved by 0.152021
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.577
ELB improved by 0.151903
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.424
ELB improved by 0.152572
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.271
ELB improved by 0.153747
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.115
ELB improved by 0.155198
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.959
ELB improved by 0.156733
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.8
ELB improved by 0.158187
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.641
ELB improved by 0.159424
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.481
ELB improved by 0.160337
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.32
ELB improved by 0.160847
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.159
ELB improved by 0.160908
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.998
ELB improved by 0.160502
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.839
ELB improved by 0.159644
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.68
ELB improved by 0.158385
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.524
ELB improved by 0.156834
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.368
ELB improved by 0.155197
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.214
ELB improved by 0.153889
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.061
ELB improved by 0.153755
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.904
ELB improved by 0.15657
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.738
ELB improved by 0.165968
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.55
ELB improved by 0.188389
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.319
ELB improved by 0.230636
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.033
ELB improved by 0.286536
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.711
ELB improved by 0.321792
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.407
ELB improved by 0.303486
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.155
ELB improved by 0.252683
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.946
ELB improved by 0.208747
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.763
ELB improved by 0.182578
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.594
ELB improved by 0.169446
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.43
ELB improved by 0.164062
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.266
ELB improved by 0.163395
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.1
ELB improved by 0.166077
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.929
ELB improved by 0.171694
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.749
ELB improved by 0.180124
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.558
ELB improved by 0.190712
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.356
ELB improved by 0.201572
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.146
ELB improved by 0.209765
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.934
ELB improved by 0.212604
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.725
ELB improved by 0.209056
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.525
ELB improved by 0.199942
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.338
ELB improved by 0.187078
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.165
ELB improved by 0.172386
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.008
ELB improved by 0.157593
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.863
ELB improved by 0.144381
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.729
ELB improved by 0.134675
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.598
ELB improved by 0.130854
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.462
ELB improved by 0.135809
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.31
ELB improved by 0.152539
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.127
ELB improved by 0.182442
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.905
ELB improved by 0.221698
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.649
ELB improved by 0.256879
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.381
ELB improved by 0.267251
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.135
ELB improved by 0.246416
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.921
ELB improved by 0.213478
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.734
ELB improved by 0.187688
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.56
ELB improved by 0.173365
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.397
ELB improved by 0.163065
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.251
ELB improved by 0.146469
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.13
ELB improved by 0.121162
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.036
ELB improved by 0.0933446
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.967
ELB improved by 0.0690563
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.917
ELB improved by 0.0502183
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.881
ELB improved by 0.0364443
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.854
ELB improved by 0.026773
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.834
ELB improved by 0.0202001
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.818
ELB improved by 0.0158213
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.805
ELB improved by 0.0129102
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.794
ELB improved by 0.0109415
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.784
ELB improved by 0.00956557
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.545 0.251 2.805
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.019 | 0.071 | |
| getPIPs | 0.047 | 0.014 | 0.061 | |
| graper | 0.074 | 0.019 | 0.095 | |
| makeExampleData | 0.011 | 0.001 | 0.012 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.002 | 0.013 | |
| plotELBO | 0.244 | 0.022 | 0.266 | |
| plotGroupPenalties | 0.774 | 0.015 | 0.793 | |
| plotPosterior | 0.566 | 0.022 | 0.593 | |
| predict.graper | 1.894 | 0.088 | 1.992 | |
| print.graper | 0.047 | 0.012 | 0.060 | |