Britta Velten
| Snapshot Date: 2026-04-13 13:40 -0400 (Mon, 13 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-14 11:35 -0400 (Tue, 14 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4924 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4655 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 936/2394 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-04-14 01:22:28 -0400 (Tue, 14 Apr 2026) |
| EndedAt: 2026-04-14 01:24:00 -0400 (Tue, 14 Apr 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-04-05 r89794)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-14 05:22:29 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-04-05 r89794)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.686
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.494
ELB improved by 317.192
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.158
ELB improved by 55.3355
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.041
ELB improved by 32.1166
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.974
ELB improved by 13.0672
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.183
ELB improved by 5.79077
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.359
ELB improved by 3.82407
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.945
ELB improved by 3.41474
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.531
ELB improved by 3.41384
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.009
ELB improved by 3.52225
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.41
ELB improved by 3.59889
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.888
ELB improved by 3.5221
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.716
ELB improved by 3.17186
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.186
ELB improved by 2.52921
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.399
ELB improved by 1.78726
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.217
ELB improved by 1.1822
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.424
ELB improved by 0.792828
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.85
ELB improved by 0.573697
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.392
ELB improved by 0.458798
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.99
ELB improved by 0.402011
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.613
ELB improved by 0.377066
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.243
ELB improved by 0.370036
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.869
ELB improved by 0.373617
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.485
ELB improved by 0.38382
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.087
ELB improved by 0.398318
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.671
ELB improved by 0.415733
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.236
ELB improved by 0.435458
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.778
ELB improved by 0.457801
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.293
ELB improved by 0.484391
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.774
ELB improved by 0.518954
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.205
ELB improved by 0.568978
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.556
ELB improved by 0.649478
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.765
ELB improved by 0.790554
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.723
ELB improved by 1.04202
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.303
ELB improved by 1.42058
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.558
ELB improved by 1.74471
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.715
ELB improved by 1.84286
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.82
ELB improved by 1.89538
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.999
ELB improved by 1.82072
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.485
ELB improved by 1.51462
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.33
ELB improved by 1.1548
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.439
ELB improved by 0.890522
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.658
ELB improved by 0.780991
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.863
ELB improved by 0.795493
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.139
ELB improved by 0.723861
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.64
ELB improved by 0.49907
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.326
ELB improved by 0.31372
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.109
ELB improved by 0.216923
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.933
ELB improved by 0.176
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.776
ELB improved by 0.157302
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.641
ELB improved by 0.134804
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.539
ELB improved by 0.102503
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.467
ELB improved by 0.071733
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.417
ELB improved by 0.0502244
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.38
ELB improved by 0.0371187
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.35
ELB improved by 0.0292259
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.326
ELB improved by 0.0242048
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.305
ELB improved by 0.0207545
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.287
ELB improved by 0.0182031
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.271
ELB improved by 0.0162029
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.256
ELB improved by 0.0145676
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.243
ELB improved by 0.0131925
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.231
ELB improved by 0.0120143
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.22
ELB improved by 0.0109924
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.21
ELB improved by 0.0100983
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.201
ELB improved by 0.00931134
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.42
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.452
ELB improved by 296.968
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.068
ELB improved by 58.3838
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.475
ELB improved by 36.5926
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.527
ELB improved by 15.9488
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.895
ELB improved by 6.63132
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.909
ELB improved by 3.98603
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.653
ELB improved by 3.25664
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.565
ELB improved by 3.08788
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.395
ELB improved by 3.16987
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.983
ELB improved by 3.41215
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.231
ELB improved by 3.7519
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.165
ELB improved by 4.06603
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.036
ELB improved by 4.12899
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.318
ELB improved by 3.7182
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.435
ELB improved by 2.88237
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.461
ELB improved by 1.97414
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.173
ELB improved by 1.28761
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.316
ELB improved by 0.857921
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.719
ELB improved by 0.596773
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.287
ELB improved by 0.431378
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.962
ELB improved by 0.324911
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.706
ELB improved by 0.256182
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.496
ELB improved by 0.210546
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.317
ELB improved by 0.178666
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.162
ELB improved by 0.155176
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.025
ELB improved by 0.13709
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.902
ELB improved by 0.122697
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.791
ELB improved by 0.110966
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.69
ELB improved by 0.101237
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.597
ELB improved by 0.0930633
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.511
ELB improved by 0.0861286
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.43
ELB improved by 0.0802001
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.355
ELB improved by 0.0751004
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.285
ELB improved by 0.0706911
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.218
ELB improved by 0.066862
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.154
ELB improved by 0.0635237
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.094
ELB improved by 0.0606028
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.036
ELB improved by 0.0580384
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.98
ELB improved by 0.0557796
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.926
ELB improved by 0.0537834
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.874
ELB improved by 0.0520132
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.824
ELB improved by 0.050438
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.775
ELB improved by 0.0490311
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.727
ELB improved by 0.0477694
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.68
ELB improved by 0.0466332
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.635
ELB improved by 0.0456055
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.59
ELB improved by 0.0446715
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.546
ELB improved by 0.0438185
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.503
ELB improved by 0.0430355
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.461
ELB improved by 0.0423132
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.419
ELB improved by 0.0416435
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.378
ELB improved by 0.0410197
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.338
ELB improved by 0.0404359
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.298
ELB improved by 0.0398872
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.258
ELB improved by 0.0393698
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.22
ELB improved by 0.0388802
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.181
ELB improved by 0.038416
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.143
ELB improved by 0.037975
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.106
ELB improved by 0.0375557
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.068
ELB improved by 0.0371571
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.032
ELB improved by 0.0367785
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.995
ELB improved by 0.0364194
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.959
ELB improved by 0.03608
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.923
ELB improved by 0.0357603
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.888
ELB improved by 0.0354606
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.853
ELB improved by 0.0351814
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.818
ELB improved by 0.0349233
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.783
ELB improved by 0.0346865
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.749
ELB improved by 0.0344715
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.714
ELB improved by 0.0342783
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.68
ELB improved by 0.0341067
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.646
ELB improved by 0.0339563
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.613
ELB improved by 0.0338261
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.579
ELB improved by 0.0337145
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.545
ELB improved by 0.0336198
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.512
ELB improved by 0.0335392
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.478
ELB improved by 0.0334698
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.445
ELB improved by 0.0334078
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.411
ELB improved by 0.0333492
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.378
ELB improved by 0.0332894
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.345
ELB improved by 0.0332235
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.312
ELB improved by 0.0331465
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.279
ELB improved by 0.0330531
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.246
ELB improved by 0.0329385
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.213
ELB improved by 0.032798
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.18
ELB improved by 0.0326277
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.148
ELB improved by 0.0324242
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.116
ELB improved by 0.0321857
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.084
ELB improved by 0.0319115
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.052
ELB improved by 0.0316027
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.021
ELB improved by 0.0312622
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.99
ELB improved by 0.0308954
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.96
ELB improved by 0.03051
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.929
ELB improved by 0.0301165
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.9
ELB improved by 0.0297282
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.87
ELB improved by 0.0293617
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.841
ELB improved by 0.0290369
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.813
ELB improved by 0.0287774
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.784
ELB improved by 0.0286107
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.755
ELB improved by 0.0285691
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.727
ELB improved by 0.02869
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.698
ELB improved by 0.0290177
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.668
ELB improved by 0.0296057
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.638
ELB improved by 0.0305205
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.606
ELB improved by 0.0318502
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.572
ELB improved by 0.0337199
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.536
ELB improved by 0.0363212
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.496
ELB improved by 0.0399712
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.45
ELB improved by 0.0452285
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.397
ELB improved by 0.0531291
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.332
ELB improved by 0.0656659
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.245
ELB improved by 0.0867097
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.122
ELB improved by 0.123262
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.937
ELB improved by 0.184148
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.672
ELB improved by 0.26536
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.344
ELB improved by 0.328256
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.003
ELB improved by 0.341312
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.684
ELB improved by 0.318397
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.412
ELB improved by 0.272062
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.196
ELB improved by 0.216323
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.031
ELB improved by 0.164554
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.909
ELB improved by 0.12221
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.819
ELB improved by 0.0898359
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.753
ELB improved by 0.065973
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.705
ELB improved by 0.0487096
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.668
ELB improved by 0.0363504
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.641
ELB improved by 0.0275851
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.619
ELB improved by 0.0214687
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.602
ELB improved by 0.0173651
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.587
ELB improved by 0.0149116
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.573
ELB improved by 0.014029
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.558
ELB improved by 0.0150055
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.539
ELB improved by 0.0186965
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.512
ELB improved by 0.0268828
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.47
ELB improved by 0.0427001
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.399
ELB improved by 0.0705248
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.285
ELB improved by 0.113971
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.111
ELB improved by 0.173843
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.851
ELB improved by 0.260604
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.432
ELB improved by 0.418847
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.829
ELB improved by 0.602791
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.28
ELB improved by 0.54873
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.883
ELB improved by 0.397216
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.544
ELB improved by 0.338565
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.236
ELB improved by 0.308148
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.989
ELB improved by 0.24757
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.807
ELB improved by 0.181905
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.673
ELB improved by 0.133623
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.572
ELB improved by 0.10164
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.491
ELB improved by 0.0801555
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.427
ELB improved by 0.0644689
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.375
ELB improved by 0.0518847
iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.334
ELB improved by 0.0413811
iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.301
ELB improved by 0.0327576
iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.275
ELB improved by 0.025944
iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.254
ELB improved by 0.0207388
iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.237
ELB improved by 0.0168345
iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.223
ELB improved by 0.0139129
iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.212
ELB improved by 0.0117045
iteration 161
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.202
ELB improved by 0.010005
iteration 162
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.193
ELB improved by 0.0086676
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.984
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.772
ELB improved by 296.212
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.933
ELB improved by 63.8387
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.313
ELB improved by 41.6207
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.186
ELB improved by 18.1271
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.572
ELB improved by 8.61333
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.429
ELB improved by 7.14345
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.923
ELB improved by 7.50543
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.045
ELB improved by 7.87826
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.16
ELB improved by 6.88481
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.403
ELB improved by 4.7572
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.516
ELB improved by 2.88686
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.682
ELB improved by 1.83467
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.343
ELB improved by 1.33835
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.229
ELB improved by 1.11392
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.206
ELB improved by 1.02307
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.193
ELB improved by 1.01332
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.109
ELB improved by 1.08361
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.886
ELB improved by 1.22307
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.567
ELB improved by 1.31891
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.268
ELB improved by 1.29942
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.032
ELB improved by 1.23607
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.862
ELB improved by 1.16983
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.756
ELB improved by 1.10618
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.713
ELB improved by 1.04268
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.739
ELB improved by 0.973882
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.844
ELB improved by 0.895365
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.037
ELB improved by 0.806847
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.324
ELB improved by 0.712907
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.703
ELB improved by 0.620919
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.165
ELB improved by 0.53825
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.693
ELB improved by 0.471579
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.264
ELB improved by 0.429167
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.839
ELB improved by 0.425396
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.354
ELB improved by 0.484607
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.739
ELB improved by 0.614703
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.042
ELB improved by 0.697486
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.488
ELB improved by 0.554272
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.165
ELB improved by 0.322546
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.984
ELB improved by 0.18075
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.871
ELB improved by 0.113747
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.79
ELB improved by 0.0804093
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.729
ELB improved by 0.0615159
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.679
ELB improved by 0.0494583
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.638
ELB improved by 0.0410548
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.603
ELB improved by 0.0348269
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.573
ELB improved by 0.030009
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.547
ELB improved by 0.0261641
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.524
ELB improved by 0.0230232
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.504
ELB improved by 0.0204106
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.486
ELB improved by 0.0182064
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.469
ELB improved by 0.0163256
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.455
ELB improved by 0.0147065
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.441
ELB improved by 0.0133025
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.429
ELB improved by 0.0120779
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.418
ELB improved by 0.0110048
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.408
ELB improved by 0.0100606
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.399
ELB improved by 0.00922697
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.31
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.993
ELB improved by 298.317
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.984
ELB improved by 66.009
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.98
ELB improved by 45.0043
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.402
ELB improved by 18.5771
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.499
ELB improved by 6.90304
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.622
ELB improved by 3.87743
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.943
ELB improved by 2.67861
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.863
ELB improved by 2.08026
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.101
ELB improved by 1.76213
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.524
ELB improved by 1.57738
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.07
ELB improved by 1.45403
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.713
ELB improved by 1.35687
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.442
ELB improved by 1.27092
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.25
ELB improved by 1.19197
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.129
ELB improved by 1.12052
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.071
ELB improved by 1.05846
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.063
ELB improved by 1.00744
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.095
ELB improved by 0.968352
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.154
ELB improved by 0.94092
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.231
ELB improved by 0.923249
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.32
ELB improved by 0.910871
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.424
ELB improved by 0.895667
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.558
ELB improved by 0.86582
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.749
ELB improved by 0.809223
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.027
ELB improved by 0.721932
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.412
ELB improved by 0.615074
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.903
ELB improved by 0.509436
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.48
ELB improved by 0.422451
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.119
ELB improved by 0.361549
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.793
ELB improved by 0.326159
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.48
ELB improved by 0.312205
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.165
ELB improved by 0.315063
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.835
ELB improved by 0.330618
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.479
ELB improved by 0.355247
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.094
ELB improved by 0.38553
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.676
ELB improved by 0.418156
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.226
ELB improved by 0.450198
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.746
ELB improved by 0.47957
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.241
ELB improved by 0.505377
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.713
ELB improved by 0.528001
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.164
ELB improved by 0.54887
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.594
ELB improved by 0.569915
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.001
ELB improved by 0.592679
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.384
ELB improved by 0.616822
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.746
ELB improved by 0.637916
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.1
ELB improved by 0.646892
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.463
ELB improved by 0.636359
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.854
ELB improved by 0.609409
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.277
ELB improved by 0.576467
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.732
ELB improved by 0.545624
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.213
ELB improved by 0.519098
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.72
ELB improved by 0.492757
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.261
ELB improved by 0.458832
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.846
ELB improved by 0.414819
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.481
ELB improved by 0.365393
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.164
ELB improved by 0.316314
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.891
ELB improved by 0.273626
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.648
ELB improved by 0.242576
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.423
ELB improved by 0.225304
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.201
ELB improved by 0.221577
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.972
ELB improved by 0.229396
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.729
ELB improved by 0.243172
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.476
ELB improved by 0.253117
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.227
ELB improved by 0.248893
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.001
ELB improved by 0.225431
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.812
ELB improved by 0.189201
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.657
ELB improved by 0.155427
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.522
ELB improved by 0.134841
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.393
ELB improved by 0.128743
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.26
ELB improved by 0.132921
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.12
ELB improved by 0.139964
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.98
ELB improved by 0.140277
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.853
ELB improved by 0.127107
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.75
ELB improved by 0.103086
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.672
ELB improved by 0.0776722
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.614
ELB improved by 0.0577606
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.57
ELB improved by 0.0445276
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.533
ELB improved by 0.0364118
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.502
ELB improved by 0.0317091
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.472
ELB improved by 0.029353
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.443
ELB improved by 0.0289224
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.413
ELB improved by 0.0305817
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.378
ELB improved by 0.0352153
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.333
ELB improved by 0.0449612
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.268
ELB improved by 0.0646387
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.163
ELB improved by 0.10543
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.969
ELB improved by 0.194015
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.581
ELB improved by 0.387694
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.851
ELB improved by 0.729905
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.873
ELB improved by 0.9782
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.987
ELB improved by 0.885381
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.315
ELB improved by 0.672689
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.817
ELB improved by 0.497892
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.429
ELB improved by 0.387863
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.12
ELB improved by 0.308589
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.884
ELB improved by 0.236244
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.701
ELB improved by 0.183593
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.546
ELB improved by 0.154688
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.415
ELB improved by 0.130852
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.317
ELB improved by 0.0983863
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.252
ELB improved by 0.0642561
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.212
ELB improved by 0.0399613
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.186
ELB improved by 0.0265223
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.166
ELB improved by 0.01959
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.151
ELB improved by 0.0156604
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.138
ELB improved by 0.0129816
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.127
ELB improved by 0.0108436
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.118
ELB improved by 0.00901606
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.457 0.183 2.627
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.057 | 0.022 | 0.079 | |
| getPIPs | 0.080 | 0.027 | 0.107 | |
| graper | 0.078 | 0.023 | 0.100 | |
| makeExampleData | 0.009 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.001 | 0.011 | |
| plotELBO | 0.303 | 0.025 | 0.327 | |
| plotGroupPenalties | 0.951 | 0.015 | 0.967 | |
| plotPosterior | 0.658 | 0.010 | 0.668 | |
| predict.graper | 2.075 | 0.062 | 2.136 | |
| print.graper | 0.053 | 0.011 | 0.064 | |