Britta Velten
| Snapshot Date: 2025-12-19 13:40 -0500 (Fri, 19 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-12-20 11:34 -0500 (Sat, 20 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4875 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4593 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2332 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-12-19 23:48:02 -0500 (Fri, 19 Dec 2025) |
| EndedAt: 2025-12-19 23:49:34 -0500 (Fri, 19 Dec 2025) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-10-20 r88955)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.92
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.547
ELB improved by 311.373
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.793
ELB improved by 58.7537
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.162
ELB improved by 37.6314
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.556
ELB improved by 15.6063
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.49
ELB improved by 6.06521
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.916
ELB improved by 3.57485
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.064
ELB improved by 2.85179
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.494
ELB improved by 2.56992
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.062
ELB improved by 2.43201
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.726
ELB improved by 2.33602
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.491
ELB improved by 2.23519
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.389
ELB improved by 2.10145
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.477
ELB improved by 1.91201
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.823
ELB improved by 1.65406
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.483
ELB improved by 1.34056
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.468
ELB improved by 1.01501
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.739
ELB improved by 0.728541
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.229
ELB improved by 0.510009
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.87
ELB improved by 0.35907
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.61
ELB improved by 0.259945
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.414
ELB improved by 0.195488
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.262
ELB improved by 0.152906
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.138
ELB improved by 0.123972
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.034
ELB improved by 0.103658
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.945
ELB improved by 0.0889056
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.867
ELB improved by 0.0778248
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.798
ELB improved by 0.0692304
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.736
ELB improved by 0.062368
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.679
ELB improved by 0.0567514
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.627
ELB improved by 0.0520617
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.579
ELB improved by 0.0480849
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.534
ELB improved by 0.0446734
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.492
ELB improved by 0.041722
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.0391535
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.416
ELB improved by 0.036909
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.381
ELB improved by 0.0349426
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.348
ELB improved by 0.0332178
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.316
ELB improved by 0.0317049
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.286
ELB improved by 0.0303795
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.257
ELB improved by 0.0292211
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.229
ELB improved by 0.0282128
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.201
ELB improved by 0.0273403
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.175
ELB improved by 0.0265915
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.149
ELB improved by 0.0259564
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.123
ELB improved by 0.0254265
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.098
ELB improved by 0.0249947
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.074
ELB improved by 0.0246555
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.049
ELB improved by 0.0244042
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.025
ELB improved by 0.0242375
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.001
ELB improved by 0.0241529
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.977
ELB improved by 0.0241491
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.952
ELB improved by 0.0242256
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.928
ELB improved by 0.024383
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.903
ELB improved by 0.0246228
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.878
ELB improved by 0.0249476
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.853
ELB improved by 0.0253611
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.827
ELB improved by 0.0258682
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.801
ELB improved by 0.0264747
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.774
ELB improved by 0.027188
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.746
ELB improved by 0.0280164
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.717
ELB improved by 0.0289695
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.687
ELB improved by 0.0300579
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.655
ELB improved by 0.031293
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.623
ELB improved by 0.0326866
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.588
ELB improved by 0.0342504
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.552
ELB improved by 0.0359952
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.514
ELB improved by 0.03793
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.474
ELB improved by 0.0400612
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.432
ELB improved by 0.0423909
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.387
ELB improved by 0.0449162
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.339
ELB improved by 0.0476278
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.289
ELB improved by 0.0505092
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.235
ELB improved by 0.0535362
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.179
ELB improved by 0.056677
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.119
ELB improved by 0.0598941
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.056
ELB improved by 0.0631474
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.989
ELB improved by 0.0664013
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.92
ELB improved by 0.0696326
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.847
ELB improved by 0.0728415
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.771
ELB improved by 0.0760599
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.691
ELB improved by 0.0793566
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.609
ELB improved by 0.082835
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.522
ELB improved by 0.0866258
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.431
ELB improved by 0.0908755
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.335
ELB improved by 0.0957351
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.234
ELB improved by 0.101358
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.126
ELB improved by 0.107916
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.01
ELB improved by 0.115646
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.885
ELB improved by 0.124927
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.749
ELB improved by 0.136389
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.598
ELB improved by 0.151057
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.427
ELB improved by 0.170543
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.23
ELB improved by 0.197272
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.996
ELB improved by 0.234527
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.71
ELB improved by 0.285399
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 0.348993
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.946
ELB improved by 0.4154
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.476
ELB improved by 0.470097
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.967
ELB improved by 0.508447
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.432
ELB improved by 0.535001
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.883
ELB improved by 0.549752
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.336
ELB improved by 0.546898
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.811
ELB improved by 0.52487
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.322
ELB improved by 0.488689
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.879
ELB improved by 0.4426
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.491
ELB improved by 0.388954
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.157
ELB improved by 0.333595
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.872
ELB improved by 0.284739
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.626
ELB improved by 0.245958
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.413
ELB improved by 0.213607
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.232
ELB improved by 0.181129
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.085
ELB improved by 0.1461
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.973
ELB improved by 0.11237
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.888
ELB improved by 0.0848669
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.823
ELB improved by 0.0651956
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.771
ELB improved by 0.052219
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.727
ELB improved by 0.0440788
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.687
ELB improved by 0.0391862
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.651
ELB improved by 0.0363665
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.616
ELB improved by 0.0347558
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.583
ELB improved by 0.0337216
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.55
ELB improved by 0.0328608
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.518
ELB improved by 0.0320346
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.486
ELB improved by 0.0313822
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.455
ELB improved by 0.0312909
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.423
ELB improved by 0.0323938
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.387
ELB improved by 0.0357319
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.344
ELB improved by 0.0433159
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.284
ELB improved by 0.0595955
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.189
ELB improved by 0.0947483
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.022
ELB improved by 0.167187
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.749
ELB improved by 0.272996
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.447
ELB improved by 0.302223
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.236
ELB improved by 0.21077
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.11
ELB improved by 0.126044
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.036
ELB improved by 0.0740197
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.993
ELB improved by 0.0428327
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.967
ELB improved by 0.026041
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.95
ELB improved by 0.0174815
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.937
ELB improved by 0.0129778
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.926
ELB improved by 0.0103974
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.918
ELB improved by 0.00876209
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.052
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.396
ELB improved by 307.656
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.457
ELB improved by 63.9391
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.814
ELB improved by 41.643
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.91
ELB improved by 18.904
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.756
ELB improved by 8.15404
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.967
ELB improved by 4.78926
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.526
ELB improved by 3.44021
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.686
ELB improved by 2.84092
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.109
ELB improved by 2.57655
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.665
ELB improved by 2.44444
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.304
ELB improved by 2.36066
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.013
ELB improved by 2.29105
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.795
ELB improved by 2.21742
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.672
ELB improved by 2.12387
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.679
ELB improved by 1.99298
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.868
ELB improved by 1.81053
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.292
ELB improved by 1.57578
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.985
ELB improved by 1.30764
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.946
ELB improved by 1.03841
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.147
ELB improved by 0.798746
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.541
ELB improved by 0.606215
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.078
ELB improved by 0.463479
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.715
ELB improved by 0.363003
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.421
ELB improved by 0.293567
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.176
ELB improved by 0.245043
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.966
ELB improved by 0.210156
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.782
ELB improved by 0.184255
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.617
ELB improved by 0.164499
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.468
ELB improved by 0.149151
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.331
ELB improved by 0.137123
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.203
ELB improved by 0.127708
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.083
ELB improved by 0.120432
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.968
ELB improved by 0.114973
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.857
ELB improved by 0.111107
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.748
ELB improved by 0.108689
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.64
ELB improved by 0.107631
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.533
ELB improved by 0.107895
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.423
ELB improved by 0.109492
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.311
ELB improved by 0.112482
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.194
ELB improved by 0.116981
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.07
ELB improved by 0.123173
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.939
ELB improved by 0.131327
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.797
ELB improved by 0.141819
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.642
ELB improved by 0.155167
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.47
ELB improved by 0.17204
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.277
ELB improved by 0.193247
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.057
ELB improved by 0.21964
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.805
ELB improved by 0.251889
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.515
ELB improved by 0.290146
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.181
ELB improved by 0.333777
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.8
ELB improved by 0.381354
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.369
ELB improved by 0.430801
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.89
ELB improved by 0.479297
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.367
ELB improved by 0.523038
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.809
ELB improved by 0.557502
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.231
ELB improved by 0.578494
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.648
ELB improved by 0.583301
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.077
ELB improved by 0.570944
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.535
ELB improved by 0.541333
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.041
ELB improved by 0.494739
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.607
ELB improved by 0.433216
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.245
ELB improved by 0.362727
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.952
ELB improved by 0.292158
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.723
ELB improved by 0.22918
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.546
ELB improved by 0.17745
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.409
ELB improved by 0.137047
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.303
ELB improved by 0.10627
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.22
ELB improved by 0.0830187
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.154
ELB improved by 0.0654307
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.102
ELB improved by 0.0520475
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.06
ELB improved by 0.0417846
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.026
ELB improved by 0.0338502
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.999
ELB improved by 0.0276675
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.976
ELB improved by 0.0228139
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.957
ELB improved by 0.0189772
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.941
ELB improved by 0.0159245
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.928
ELB improved by 0.0134806
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.916
ELB improved by 0.0115126
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.906
ELB improved by 0.00991872
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.701
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-598.171
ELB improved by 270.531
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-537.763
ELB improved by 60.408
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.388
ELB improved by 48.3741
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.31
ELB improved by 27.078
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.625
ELB improved by 12.6854
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.876
ELB improved by 6.74854
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.044
ELB improved by 4.8329
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.75
ELB improved by 4.29325
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.546
ELB improved by 4.20426
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.34
ELB improved by 4.20564
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.269
ELB improved by 4.07103
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.623
ELB improved by 3.64683
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.664
ELB improved by 2.9586
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.46
ELB improved by 2.20368
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.896
ELB improved by 1.56387
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.79
ELB improved by 1.10678
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.969
ELB improved by 0.821031
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.31
ELB improved by 0.658521
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.743
ELB improved by 0.5671
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.231
ELB improved by 0.511657
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.756
ELB improved by 0.475454
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.303
ELB improved by 0.452621
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.862
ELB improved by 0.441234
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.422
ELB improved by 0.440024
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.974
ELB improved by 0.447737
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.511
ELB improved by 0.463235
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.026
ELB improved by 0.485427
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.513
ELB improved by 0.51295
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.969
ELB improved by 0.543778
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.394
ELB improved by 0.575009
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.791
ELB improved by 0.602952
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.168
ELB improved by 0.623374
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.536
ELB improved by 0.6314
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.915
ELB improved by 0.620659
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.332
ELB improved by 0.583556
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.814
ELB improved by 0.517815
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.38
ELB improved by 0.434186
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.03
ELB improved by 0.349648
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.755
ELB improved by 0.2751
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.541
ELB improved by 0.213838
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.376
ELB improved by 0.1654
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.248
ELB improved by 0.128036
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.148
ELB improved by 0.0996751
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.07
ELB improved by 0.0783443
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.008
ELB improved by 0.0623492
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.957
ELB improved by 0.0503314
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.916
ELB improved by 0.0412489
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.882
ELB improved by 0.0343251
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.853
ELB improved by 0.0289909
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.828
ELB improved by 0.0248323
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.806
ELB improved by 0.0215489
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.787
ELB improved by 0.0189223
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.771
ELB improved by 0.0167932
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.755
ELB improved by 0.0150446
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.742
ELB improved by 0.0135902
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.73
ELB improved by 0.0123656
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.718
ELB improved by 0.0113227
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.708
ELB improved by 0.0104249
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.698
ELB improved by 0.0096444
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-896.562
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.045
ELB improved by 308.517
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.973
ELB improved by 60.0727
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.403
ELB improved by 43.5699
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.365
ELB improved by 21.0379
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.52
ELB improved by 7.84501
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.374
ELB improved by 4.14588
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.091
ELB improved by 3.28331
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.931
ELB improved by 3.15988
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.533
ELB improved by 3.39764
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.673
ELB improved by 3.86021
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.268
ELB improved by 4.40484
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.473
ELB improved by 4.79488
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.741
ELB improved by 4.73202
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.653
ELB improved by 4.08803
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.576
ELB improved by 3.07708
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.503
ELB improved by 2.07375
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.164
ELB improved by 1.33851
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.271
ELB improved by 0.893173
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.63
ELB improved by 0.641255
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.133
ELB improved by 0.496097
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.726
ELB improved by 0.40739
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.377
ELB improved by 0.349468
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.067
ELB improved by 0.309336
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.787
ELB improved by 0.280126
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.529
ELB improved by 0.258011
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.288
ELB improved by 0.240778
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.061
ELB improved by 0.22715
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.845
ELB improved by 0.21646
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.636
ELB improved by 0.208492
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.433
ELB improved by 0.203417
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.231
ELB improved by 0.201732
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.027
ELB improved by 0.204114
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.816
ELB improved by 0.211025
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.594
ELB improved by 0.221978
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.359
ELB improved by 0.234805
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.114
ELB improved by 0.245667
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.864
ELB improved by 0.250031
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.619
ELB improved by 0.244565
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.389
ELB improved by 0.229637
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.18
ELB improved by 0.209394
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.992
ELB improved by 0.188381
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.822
ELB improved by 0.169161
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.152577
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.531
ELB improved by 0.138657
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.404
ELB improved by 0.12713
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.286
ELB improved by 0.117632
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.177
ELB improved by 0.109795
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.073
ELB improved by 0.103296
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.975
ELB improved by 0.0978657
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.882
ELB improved by 0.0932896
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.793
ELB improved by 0.0894041
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.707
ELB improved by 0.0860869
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.623
ELB improved by 0.0832515
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.543
ELB improved by 0.0808442
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.464
ELB improved by 0.0788443
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.386
ELB improved by 0.077266
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.31
ELB improved by 0.0761593
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.235
ELB improved by 0.0756011
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.159
ELB improved by 0.0756581
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.083
ELB improved by 0.0762932
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.006
ELB improved by 0.0771942
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.928
ELB improved by 0.0775869
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.852
ELB improved by 0.0762723
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.779
ELB improved by 0.0721717
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.714
ELB improved by 0.065162
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.658
ELB improved by 0.0563348
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.611
ELB improved by 0.0472835
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.572
ELB improved by 0.0391975
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.539
ELB improved by 0.0325496
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.512
ELB improved by 0.0273006
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.488
ELB improved by 0.0231998
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.468
ELB improved by 0.0199719
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.451
ELB improved by 0.0173898
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.436
ELB improved by 0.0152859
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.422
ELB improved by 0.0135421
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.41
ELB improved by 0.0120762
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.399
ELB improved by 0.0108302
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.39
ELB improved by 0.00976211
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.271 0.199 2.462
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.056 | 0.014 | 0.071 | |
| getPIPs | 0.049 | 0.013 | 0.062 | |
| graper | 0.079 | 0.021 | 0.099 | |
| makeExampleData | 0.010 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.009 | 0.004 | 0.013 | |
| plotELBO | 0.317 | 0.024 | 0.342 | |
| plotGroupPenalties | 1.054 | 0.059 | 1.113 | |
| plotPosterior | 0.617 | 0.024 | 0.641 | |
| predict.graper | 2.043 | 0.077 | 2.120 | |
| print.graper | 0.049 | 0.014 | 0.062 | |