Britta Velten
| Snapshot Date: 2025-10-17 13:45 -0400 (Fri, 17 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-18 12:06 -0400 (Sat, 18 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4887 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4677 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4622 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4632 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 918/2353 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-10-17 20:09:53 -0400 (Fri, 17 Oct 2025) |
| EndedAt: 2025-10-17 20:10:22 -0400 (Fri, 17 Oct 2025) |
| EllapsedTime: 29.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-09-10 r88807)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.606
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.96
ELB improved by 315.646
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.421
ELB improved by 58.5384
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.017
ELB improved by 33.4045
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.818
ELB improved by 14.1985
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.763
ELB improved by 6.0549
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.321
ELB improved by 3.44231
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.531
ELB improved by 2.79059
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.851
ELB improved by 2.67995
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.072
ELB improved by 2.77905
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.107
ELB improved by 2.96476
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.982
ELB improved by 3.12446
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.85
ELB improved by 3.13269
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.953
ELB improved by 2.89638
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.546
ELB improved by 2.40753
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.773
ELB improved by 1.77306
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.584
ELB improved by 1.18832
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.805
ELB improved by 0.778999
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.272
ELB improved by 0.533295
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.882
ELB improved by 0.390118
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.58
ELB improved by 0.301669
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.338
ELB improved by 0.24199
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.139
ELB improved by 0.199386
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.97
ELB improved by 0.16861
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.824
ELB improved by 0.1464
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.694
ELB improved by 0.130166
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.576
ELB improved by 0.117946
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.467
ELB improved by 0.108407
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.367
ELB improved by 0.1007
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.272
ELB improved by 0.0942922
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.184
ELB improved by 0.0888419
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.099
ELB improved by 0.0841192
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.019
ELB improved by 0.0799634
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.943
ELB improved by 0.0762573
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.87
ELB improved by 0.0729128
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.8
ELB improved by 0.0698626
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.733
ELB improved by 0.0670546
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.669
ELB improved by 0.0644484
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.607
ELB improved by 0.0620127
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.547
ELB improved by 0.0597234
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.49
ELB improved by 0.0575625
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.434
ELB improved by 0.0555161
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.381
ELB improved by 0.0535742
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.329
ELB improved by 0.0517294
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.279
ELB improved by 0.0499762
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.231
ELB improved by 0.0483108
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.184
ELB improved by 0.04673
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.139
ELB improved by 0.0452313
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.095
ELB improved by 0.0438126
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.052
ELB improved by 0.0424717
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.011
ELB improved by 0.0412064
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.971
ELB improved by 0.0400144
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.932
ELB improved by 0.0388931
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.894
ELB improved by 0.0378399
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.857
ELB improved by 0.0368519
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.822
ELB improved by 0.0359259
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.787
ELB improved by 0.0350588
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.752
ELB improved by 0.0342473
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.719
ELB improved by 0.0334883
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.686
ELB improved by 0.0327782
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.654
ELB improved by 0.032114
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.622
ELB improved by 0.0314924
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.591
ELB improved by 0.0309102
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.561
ELB improved by 0.0303645
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.531
ELB improved by 0.0298523
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.502
ELB improved by 0.0293709
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.473
ELB improved by 0.0289176
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.444
ELB improved by 0.0284901
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.416
ELB improved by 0.0280859
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.389
ELB improved by 0.027703
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.361
ELB improved by 0.0273395
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.334
ELB improved by 0.0269935
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.308
ELB improved by 0.0266637
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.281
ELB improved by 0.0263486
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.255
ELB improved by 0.0260471
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.23
ELB improved by 0.0257585
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.204
ELB improved by 0.0254822
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.179
ELB improved by 0.0252178
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.154
ELB improved by 0.0249655
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.129
ELB improved by 0.0247257
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.105
ELB improved by 0.0244993
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.08
ELB improved by 0.0242875
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.056
ELB improved by 0.0240924
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.032
ELB improved by 0.0239167
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.009
ELB improved by 0.0237641
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.985
ELB improved by 0.0236393
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.961
ELB improved by 0.0235486
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.938
ELB improved by 0.0235005
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.914
ELB improved by 0.0235062
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.891
ELB improved by 0.0235806
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.867
ELB improved by 0.0237441
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.843
ELB improved by 0.0240252
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.819
ELB improved by 0.0244638
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.793
ELB improved by 0.0251176
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.767
ELB improved by 0.0260718
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.74
ELB improved by 0.0274547
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.71
ELB improved by 0.0294641
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.678
ELB improved by 0.0324098
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.641
ELB improved by 0.0367811
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.598
ELB improved by 0.0433395
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.545
ELB improved by 0.0532047
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.477
ELB improved by 0.0677808
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.389
ELB improved by 0.0881245
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.276
ELB improved by 0.113289
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.137
ELB improved by 0.138573
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.979
ELB improved by 0.157647
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.809
ELB improved by 0.170054
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.624
ELB improved by 0.185211
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.406
ELB improved by 0.217678
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.125
ELB improved by 0.281195
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.749
ELB improved by 0.375701
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.29
ELB improved by 0.459009
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.81
ELB improved by 0.480661
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.336
ELB improved by 0.473742
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.821
ELB improved by 0.514858
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.18
ELB improved by 0.641295
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.409
ELB improved by 0.770691
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.63
ELB improved by 0.779486
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.946
ELB improved by 0.683835
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.381
ELB improved by 0.565312
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.911
ELB improved by 0.469278
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.529
ELB improved by 0.38229
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.24
ELB improved by 0.288956
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.036
ELB improved by 0.204407
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.892
ELB improved by 0.143528
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.786
ELB improved by 0.105662
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.702
ELB improved by 0.0842564
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.629
ELB improved by 0.0729508
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.563
ELB improved by 0.0663489
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.503
ELB improved by 0.0599762
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.452
ELB improved by 0.0512975
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.411
ELB improved by 0.0407161
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.38
ELB improved by 0.0304611
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.358
ELB improved by 0.0222955
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.342
ELB improved by 0.0165893
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.329
ELB improved by 0.0128554
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.318
ELB improved by 0.0104451
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.309
ELB improved by 0.00885297
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.106
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.612
ELB improved by 281.494
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.209
ELB improved by 67.4031
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.162
ELB improved by 52.0471
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.259
ELB improved by 23.903
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.16
ELB improved by 9.09866
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.754
ELB improved by 5.40684
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.624
ELB improved by 4.12959
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.943
ELB improved by 3.6813
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.31
ELB improved by 3.63307
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.482
ELB improved by 3.82733
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.299
ELB improved by 4.18346
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.715
ELB improved by 4.58364
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.907
ELB improved by 4.80788
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.305
ELB improved by 4.60244
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.43
ELB improved by 3.8748
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.58
ELB improved by 2.84984
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.656
ELB improved by 1.92434
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.386
ELB improved by 1.27033
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.53
ELB improved by 0.855406
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.921
ELB improved by 0.60954
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.451
ELB improved by 0.470096
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.059
ELB improved by 0.391544
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.712
ELB improved by 0.346557
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.392
ELB improved by 0.320415
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.087
ELB improved by 0.305423
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.789
ELB improved by 0.297475
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.495
ELB improved by 0.294232
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.201
ELB improved by 0.29415
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.905
ELB improved by 0.295942
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.606
ELB improved by 0.298351
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.306
ELB improved by 0.300273
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.005
ELB improved by 0.301149
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.704
ELB improved by 0.301215
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.403
ELB improved by 0.301255
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.1
ELB improved by 0.302125
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.796
ELB improved by 0.3046
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.486
ELB improved by 0.309765
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.166
ELB improved by 0.319844
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.827
ELB improved by 0.339609
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.447
ELB improved by 0.379298
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.987
ELB improved by 0.460589
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.368
ELB improved by 0.619027
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.518
ELB improved by 0.849656
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.494
ELB improved by 1.02385
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.386
ELB improved by 1.10784
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.238
ELB improved by 1.14873
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.165
ELB improved by 1.07234
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.272
ELB improved by 0.893328
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.541
ELB improved by 0.731007
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.89
ELB improved by 0.650665
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.254
ELB improved by 0.636102
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.648
ELB improved by 0.60569
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.149
ELB improved by 0.499913
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.799
ELB improved by 0.349255
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.582
ELB improved by 0.217351
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.45
ELB improved by 0.132056
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.367
ELB improved by 0.0831808
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.311
ELB improved by 0.0557265
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.271
ELB improved by 0.0403991
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.238
ELB improved by 0.0320872
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.211
ELB improved by 0.0279771
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.184
ELB improved by 0.0264926
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.157
ELB improved by 0.0266948
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.129
ELB improved by 0.027932
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.1
ELB improved by 0.0296441
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.068
ELB improved by 0.0312738
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.036
ELB improved by 0.0322553
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.004
ELB improved by 0.0320611
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.974
ELB improved by 0.0303292
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.947
ELB improved by 0.0270528
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.924
ELB improved by 0.0226827
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.906
ELB improved by 0.0179713
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.892
ELB improved by 0.0136342
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.882
ELB improved by 0.0100956
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.875
ELB improved by 0.00745619
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-908.134
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.529
ELB improved by 320.605
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.208
ELB improved by 55.3214
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.442
ELB improved by 35.7657
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.659
ELB improved by 16.783
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.604
ELB improved by 8.05545
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.925
ELB improved by 5.67826
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.372
ELB improved by 5.55356
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.278
ELB improved by 6.09397
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.588
ELB improved by 6.69009
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.842
ELB improved by 6.74566
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.892
ELB improved by 5.95022
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.268
ELB improved by 4.62368
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.981
ELB improved by 3.28757
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.691
ELB improved by 2.28943
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.029
ELB improved by 1.6617
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.763
ELB improved by 1.26607
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.789
ELB improved by 0.974008
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.05
ELB improved by 0.739392
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.486
ELB improved by 0.564317
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.044
ELB improved by 0.442024
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.687
ELB improved by 0.356263
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.394
ELB improved by 0.293666
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.148
ELB improved by 0.246052
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.939
ELB improved by 0.2087
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.76
ELB improved by 0.178759
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.606
ELB improved by 0.154372
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.472
ELB improved by 0.134259
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.354
ELB improved by 0.117496
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.251
ELB improved by 0.103398
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.159
ELB improved by 0.0914463
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.078
ELB improved by 0.0812417
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.006
ELB improved by 0.0724732
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.941
ELB improved by 0.0648953
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.882
ELB improved by 0.058312
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.83
ELB improved by 0.0525655
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.782
ELB improved by 0.0475274
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.739
ELB improved by 0.0430925
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.7
ELB improved by 0.0391742
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.664
ELB improved by 0.0357002
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.632
ELB improved by 0.0326103
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.602
ELB improved by 0.0298538
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.574
ELB improved by 0.0273878
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.549
ELB improved by 0.0251759
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.526
ELB improved by 0.0231871
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.505
ELB improved by 0.0213948
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.485
ELB improved by 0.0197759
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.467
ELB improved by 0.0183108
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.45
ELB improved by 0.0169822
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.434
ELB improved by 0.0157752
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.419
ELB improved by 0.0146769
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.405
ELB improved by 0.0136757
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.393
ELB improved by 0.0127616
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.381
ELB improved by 0.0119258
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.37
ELB improved by 0.0111605
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.359
ELB improved by 0.0104588
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.349
ELB improved by 0.00981449
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.54
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-594.808
ELB improved by 278.732
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-535.068
ELB improved by 59.7393
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.243
ELB improved by 42.8249
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.246
ELB improved by 21.9978
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.911
ELB improved by 10.3342
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.94
ELB improved by 6.97108
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.05
ELB improved by 6.89008
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.865
ELB improved by 7.18503
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.164
ELB improved by 6.70152
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.828
ELB improved by 5.33569
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.828
ELB improved by 4.0005
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.659
ELB improved by 3.1689
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.214
ELB improved by 2.44448
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.383
ELB improved by 1.83141
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.946
ELB improved by 1.43697
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.787
ELB improved by 1.15838
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.818
ELB improved by 0.969598
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.973
ELB improved by 0.844994
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.221
ELB improved by 0.752303
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.545
ELB improved by 0.675481
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.937
ELB improved by 0.608431
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.388
ELB improved by 0.5486
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.893
ELB improved by 0.494961
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.446
ELB improved by 0.447295
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.04
ELB improved by 0.405659
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.67
ELB improved by 0.370097
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.329
ELB improved by 0.340577
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.012
ELB improved by 0.317128
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.712
ELB improved by 0.300139
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.421
ELB improved by 0.290997
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.127
ELB improved by 0.2938
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.806
ELB improved by 0.320938
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.392
ELB improved by 0.414413
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.676
ELB improved by 0.715659
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.293
ELB improved by 1.38375
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.41
ELB improved by 1.88283
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.44
ELB improved by 1.9703
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.301
ELB improved by 2.13863
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.163
ELB improved by 2.13741
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.674
ELB improved by 1.48923
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.714
ELB improved by 0.960551
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.044
ELB improved by 0.669949
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.458
ELB improved by 0.585785
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.829
ELB improved by 0.628721
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.312
ELB improved by 0.516861
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.021
ELB improved by 0.291239
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.864
ELB improved by 0.157532
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.768
ELB improved by 0.095215
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.704
ELB improved by 0.0645084
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.656
ELB improved by 0.0476962
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.619
ELB improved by 0.0373507
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.588
ELB improved by 0.0303568
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.563
ELB improved by 0.0253225
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.542
ELB improved by 0.0215445
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.523
ELB improved by 0.0186221
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.507
ELB improved by 0.0163065
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.492
ELB improved by 0.014435
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.479
ELB improved by 0.0128968
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.468
ELB improved by 0.0116144
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.457
ELB improved by 0.0105322
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.448
ELB improved by 0.00960937
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.006 0.073 1.076
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.029 | 0.005 | 0.033 | |
| getPIPs | 0.027 | 0.004 | 0.031 | |
| graper | 0.052 | 0.006 | 0.058 | |
| makeExampleData | 0.004 | 0.001 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.005 | 0.000 | 0.005 | |
| plotELBO | 0.131 | 0.008 | 0.142 | |
| plotGroupPenalties | 0.444 | 0.010 | 0.457 | |
| plotPosterior | 0.219 | 0.008 | 0.228 | |
| predict.graper | 1.037 | 0.026 | 1.064 | |
| print.graper | 0.027 | 0.003 | 0.031 | |