BiocParallel
This is the development version of BiocParallel; for the stable release version, see BiocParallel.
Bioconductor facilities for parallel evaluation
Bioconductor version: Development (3.23)
This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.
Author: Jiefei Wang [aut, cre], Martin Morgan [aut], Valerie Obenchain [aut], Michel Lang [aut], Ryan Thompson [aut], Nitesh Turaga [aut], Aaron Lun [ctb], Henrik Bengtsson [ctb], Madelyn Carlson [ctb] (Translated 'Random Numbers' vignette from Sweave to RMarkdown / HTML.), Phylis Atieno [ctb] (Translated 'Introduction to BiocParallel' vignette from Sweave to Rmarkdown / HTML.), Sergio Oller [ctb] (Improved bpmapply() efficiency., ORCID:
)
Maintainer: Jiefei Wang <jiefei0804 at gmail.com>
citation("BiocParallel")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("BiocParallel")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Infrastructure, Software |
| Version | 1.43.4 |
| In Bioconductor since | BioC 2.13 (R-3.0) (12 years) |
| License | GPL-2 | GPL-3 | BSL-1.0 |
| Depends | methods, R (>= 4.1.0) |
| Imports | stats, utils, futile.logger, parallel, snow, codetools |
| System Requirements | C++11 |
| URL | https://github.com/Bioconductor/BiocParallel |
| Bug Reports | https://github.com/Bioconductor/BiocParallel/issues |
See More
| Suggests | BiocGenerics, tools, foreach, BBmisc, doParallel, GenomicRanges, RNAseqData.HNRNPC.bam.chr14, TxDb.Hsapiens.UCSC.hg19.knownGene, VariantAnnotation, Rsamtools, GenomicAlignments, ShortRead, RUnit, BiocStyle, knitr, batchtools, data.table |
| Linking To | BH (>= 1.87.0), cpp11 |
| Enhances | Rmpi |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocParallel |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocParallel |
| Package Short Url | https://bioconductor.org/packages/BiocParallel/ |
| Package Downloads Report | Download Stats |