Multiple platform build/check report for BioC 3.22 - CHECK results for graper on merida1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4882
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4673
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4607
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4671
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on merida1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.26.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz

StartedAt: 2025-12-16 05:11:57 -0500 (Tue, 16 Dec 2025)

EndedAt: 2025-12-16 05:14:09 -0500 (Tue, 16 Dec 2025)

EllapsedTime: 132.8 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.361
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.18
ELB improved by 305.181

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.274
ELB improved by 58.9062

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.565
ELB improved by 37.7091

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.138
ELB improved by 15.4267

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.765
ELB improved by 6.37306

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.754
ELB improved by 4.011

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.524
ELB improved by 3.23055

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.609
ELB improved by 2.91416

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.889
ELB improved by 2.72064

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.371
ELB improved by 2.51746

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.121
ELB improved by 2.25012

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.208
ELB improved by 1.913

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.666
ELB improved by 1.54166

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.476
ELB improved by 1.19054

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.575
ELB improved by 0.901151

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.888
ELB improved by 0.686309

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.351
ELB improved by 0.537306

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.913
ELB improved by 0.438087

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.539
ELB improved by 0.373894

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.205
ELB improved by 0.333867

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.895
ELB improved by 0.310489

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.597
ELB improved by 0.297788

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.307
ELB improved by 0.289587

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.028
ELB improved by 0.279286

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.767
ELB improved by 0.261684

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.531
ELB improved by 0.235069

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.33
ELB improved by 0.20165

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.163
ELB improved by 0.166294

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.029
ELB improved by 0.134091

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.921
ELB improved by 0.108055

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.833
ELB improved by 0.08862

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.758
ELB improved by 0.0746701

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.693
ELB improved by 0.0647014

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.636
ELB improved by 0.0574283

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.584
ELB improved by 0.0519336

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.536
ELB improved by 0.0476182

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.492
ELB improved by 0.0441058

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.451
ELB improved by 0.0411631

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.412
ELB improved by 0.0386433

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.376
ELB improved by 0.0364519

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.341
ELB improved by 0.0345252

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.309
ELB improved by 0.0328182

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.277
ELB improved by 0.0312976

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.247
ELB improved by 0.0299375

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.219
ELB improved by 0.0287169

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.191
ELB improved by 0.0276186

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.164
ELB improved by 0.026628

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.139
ELB improved by 0.0257325

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.114
ELB improved by 0.0249211

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.09
ELB improved by 0.0241841

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.066
ELB improved by 0.0235133

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.043
ELB improved by 0.0229011

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.021
ELB improved by 0.0223409

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.999
ELB improved by 0.0218268

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.978
ELB improved by 0.0213537

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.957
ELB improved by 0.020917

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.936
ELB improved by 0.0205124

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.916
ELB improved by 0.0201366

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.896
ELB improved by 0.0197863

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.877
ELB improved by 0.0194587

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.858
ELB improved by 0.0191517

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.839
ELB improved by 0.0188631

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.82
ELB improved by 0.0185913

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.802
ELB improved by 0.018335

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.784
ELB improved by 0.0180933

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.766
ELB improved by 0.0178652

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.748
ELB improved by 0.0176505

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.731
ELB improved by 0.0174489

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.714
ELB improved by 0.0172606

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.697
ELB improved by 0.0170858

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.68
ELB improved by 0.0169252

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.663
ELB improved by 0.0167796

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.646
ELB improved by 0.0166502

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.63
ELB improved by 0.0165384

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.613
ELB improved by 0.0164457

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.597
ELB improved by 0.0163742

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.581
ELB improved by 0.0163262

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.564
ELB improved by 0.0163042

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.548
ELB improved by 0.0163113

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.532
ELB improved by 0.0163507

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.515
ELB improved by 0.0164264

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.499
ELB improved by 0.0165425

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.482
ELB improved by 0.0167038

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.465
ELB improved by 0.0169156

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.448
ELB improved by 0.0171835

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.43
ELB improved by 0.0175135

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.412
ELB improved by 0.0179118

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.394
ELB improved by 0.0183844

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.375
ELB improved by 0.0189365

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.355
ELB improved by 0.0195721

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.335
ELB improved by 0.0202927

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.314
ELB improved by 0.0210964

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.292
ELB improved by 0.0219761

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.269
ELB improved by 0.0229191

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.245
ELB improved by 0.0239057

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.22
ELB improved by 0.0249098

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.194
ELB improved by 0.0259005

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.168
ELB improved by 0.026845

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.14
ELB improved by 0.027713

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.111
ELB improved by 0.0284806

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.082
ELB improved by 0.0291332

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.053
ELB improved by 0.0296674

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.023
ELB improved by 0.0300891

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.992
ELB improved by 0.030412

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.961
ELB improved by 0.0306543

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.931
ELB improved by 0.0308361

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.9
ELB improved by 0.0309785

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.869
ELB improved by 0.0311018

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.837
ELB improved by 0.0312262

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.806
ELB improved by 0.031371

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.774
ELB improved by 0.0315554

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.743
ELB improved by 0.0317987

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.71
ELB improved by 0.0321207

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.678
ELB improved by 0.0325422

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.645
ELB improved by 0.0330853

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.611
ELB improved by 0.033774

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.576
ELB improved by 0.0346343

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.541
ELB improved by 0.0356931

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.504
ELB improved by 0.0369771

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.465
ELB improved by 0.0385087

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.425
ELB improved by 0.0402994

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.383
ELB improved by 0.0423404

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.338
ELB improved by 0.0445907

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.291
ELB improved by 0.0469664

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.242
ELB improved by 0.0493387

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.19
ELB improved by 0.0515484

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.137
ELB improved by 0.0534381

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.082
ELB improved by 0.0548931

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.026
ELB improved by 0.0558682

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.97
ELB improved by 0.0563837

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.913
ELB improved by 0.0564963

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.857
ELB improved by 0.0562621

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.801
ELB improved by 0.0557146

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.746
ELB improved by 0.054861

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.693
ELB improved by 0.0536924

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.64
ELB improved by 0.0521987

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.59
ELB improved by 0.0503815

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.542
ELB improved by 0.0482612

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.496
ELB improved by 0.045878

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.0432879

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.412
ELB improved by 0.040556

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.374
ELB improved by 0.0377496

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.339
ELB improved by 0.0349324

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.307
ELB improved by 0.0321603

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.278
ELB improved by 0.0294796

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.251
ELB improved by 0.0269265

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.226
ELB improved by 0.024528

iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.204
ELB improved by 0.0223027

iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.184
ELB improved by 0.0202621

iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.165
ELB improved by 0.0184125

iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.148
ELB improved by 0.0167558

iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.133
ELB improved by 0.0152908

iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.119
ELB improved by 0.0140138

iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.106
ELB improved by 0.0129199

iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.094
ELB improved by 0.012003

iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.083
ELB improved by 0.0112564

iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.072
ELB improved by 0.010673

iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.062
ELB improved by 0.0102449

iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.052
ELB improved by 0.00996346

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-826.137
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.95
ELB improved by 253.187

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.799
ELB improved by 63.1512

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.671
ELB improved by 48.1272

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.595
ELB improved by 22.0763

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.957
ELB improved by 8.63774

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.202
ELB improved by 4.75533

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.485
ELB improved by 3.71714

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.115
ELB improved by 3.37009

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.818
ELB improved by 3.29694

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.443
ELB improved by 3.37474

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.891
ELB improved by 3.55188

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.135
ELB improved by 3.75596

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.305
ELB improved by 3.83061

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.736
ELB improved by 3.56884

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.83
ELB improved by 2.90568

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.766
ELB improved by 2.06381

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.415
ELB improved by 1.3512

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.526
ELB improved by 0.889505

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.893
ELB improved by 0.632717

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.391
ELB improved by 0.501439

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.95
ELB improved by 0.440971

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.529
ELB improved by 0.421313

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.103
ELB improved by 0.425916

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.659
ELB improved by 0.444308

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.189
ELB improved by 0.469882

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.69
ELB improved by 0.499534

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.158
ELB improved by 0.531602

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.595
ELB improved by 0.563374

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.004
ELB improved by 0.590658

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.394
ELB improved by 0.609403

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.777
ELB improved by 0.617972

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.158
ELB improved by 0.618083

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.544
ELB improved by 0.614018

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.933
ELB improved by 0.61158

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.315
ELB improved by 0.617497

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.678
ELB improved by 0.637667

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.009
ELB improved by 0.669118

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.322
ELB improved by 0.686883

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.657
ELB improved by 0.664671

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.033
ELB improved by 0.624269

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.432
ELB improved by 0.600676

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.847
ELB improved by 0.584722

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.312
ELB improved by 0.53556

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.865
ELB improved by 0.446886

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.513
ELB improved by 0.351521

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.244
ELB improved by 0.269098

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.041
ELB improved by 0.203054

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.889
ELB improved by 0.152304

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.774
ELB improved by 0.114569

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.687
ELB improved by 0.0871537

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.62
ELB improved by 0.0674655

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.566
ELB improved by 0.0533324

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.523
ELB improved by 0.0430923

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.488
ELB improved by 0.0355481

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.458
ELB improved by 0.0298699

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.432
ELB improved by 0.0254959

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.41
ELB improved by 0.0220492

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.391
ELB improved by 0.0192773

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.374
ELB improved by 0.0170096

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.359
ELB improved by 0.0151285

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.345
ELB improved by 0.0135514

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.333
ELB improved by 0.0122181

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.322
ELB improved by 0.0110838

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.312
ELB improved by 0.0101139

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.303
ELB improved by 0.00928132

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-862.394
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-591.521
ELB improved by 270.872

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.705
ELB improved by 57.8166

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.848
ELB improved by 44.8573

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.277
ELB improved by 23.5711

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.435
ELB improved by 8.84153

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.172
ELB improved by 4.26299

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.983
ELB improved by 3.18943

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.986
ELB improved by 2.99627

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.822
ELB improved by 3.16392

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.322
ELB improved by 3.5008

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.511
ELB improved by 3.81075

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.686
ELB improved by 3.82526

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.305
ELB improved by 3.38099

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.656
ELB improved by 2.64854

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.685
ELB improved by 1.97141

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.161
ELB improved by 1.52345

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.876
ELB improved by 1.28517

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.68
ELB improved by 1.19578

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.468
ELB improved by 1.21235

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.181
ELB improved by 1.28697

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.835
ELB improved by 1.3456

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.498
ELB improved by 1.33731

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 1.28224

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.001
ELB improved by 1.21432

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.853
ELB improved by 1.14885

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.761
ELB improved by 1.09188

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.714
ELB improved by 1.04636

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.699
ELB improved by 1.01546

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.692
ELB improved by 1.00709

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.646
ELB improved by 1.04532

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.453
ELB improved by 1.19346

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.975
ELB improved by 1.47816

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.388
ELB improved by 1.58662

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.935
ELB improved by 1.45369

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.609
ELB improved by 1.32599

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.401
ELB improved by 1.2072

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.35
ELB improved by 1.05111

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.491
ELB improved by 0.859198

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.826
ELB improved by 0.664591

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.328
ELB improved by 0.498886

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.951
ELB improved by 0.37611

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.656
ELB improved by 0.29519

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.4
ELB improved by 0.256705

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.122
ELB improved by 0.277695

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.758
ELB improved by 0.363928

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.361
ELB improved by 0.397389

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.064
ELB improved by 0.296067

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.885
ELB improved by 0.179558

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.778
ELB improved by 0.106721

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.711
ELB improved by 0.0674711

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.664
ELB improved by 0.0465402

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.629
ELB improved by 0.0347743

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.602
ELB improved by 0.027586

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.579
ELB improved by 0.0228023

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.56
ELB improved by 0.0193853

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.543
ELB improved by 0.0168143

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.528
ELB improved by 0.0148079

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.515
ELB improved by 0.0132021

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.503
ELB improved by 0.0118936

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.492
ELB improved by 0.0108132

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.482
ELB improved by 0.00991229

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.859
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.709
ELB improved by 313.15

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.737
ELB improved by 57.9722

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.103
ELB improved by 36.6333

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.196
ELB improved by 15.9071

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.993
ELB improved by 7.20367

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.733
ELB improved by 5.25992

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.398
ELB improved by 5.33432

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.315
ELB improved by 6.08312

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.445
ELB improved by 6.87002

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.572
ELB improved by 6.87327

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.879
ELB improved by 5.69257

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.799
ELB improved by 4.08015

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.043
ELB improved by 2.75592

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.272
ELB improved by 1.77148

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.136
ELB improved by 1.13616

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.357
ELB improved by 0.778961

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.769
ELB improved by 0.587266

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.287
ELB improved by 0.482189

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.867
ELB improved by 0.420411

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.487
ELB improved by 0.380253

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.136
ELB improved by 0.351018

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.808
ELB improved by 0.32727

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.502
ELB improved by 0.306171

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 0.286261

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.949
ELB improved by 0.266878

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.701
ELB improved by 0.247837

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.472
ELB improved by 0.229232

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.261
ELB improved by 0.211294

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.066
ELB improved by 0.194282

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.888
ELB improved by 0.17842

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.724
ELB improved by 0.163864

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.573
ELB improved by 0.150695

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.434
ELB improved by 0.13893

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.306
ELB improved by 0.128547

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.186
ELB improved by 0.119508

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.075
ELB improved by 0.111787

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.969
ELB improved by 0.105401

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.869
ELB improved by 0.100459

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.772
ELB improved by 0.0972541

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.675
ELB improved by 0.0964319

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.576
ELB improved by 0.0993299

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.467
ELB improved by 0.108505

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.339
ELB improved by 0.12784

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.18
ELB improved by 0.158954

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.991
ELB improved by 0.189571

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.797
ELB improved by 0.193784

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.626
ELB improved by 0.170676

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.481
ELB improved by 0.14552

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.351
ELB improved by 0.12993

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.229
ELB improved by 0.12181

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.112
ELB improved by 0.117576

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.115098

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.883
ELB improved by 0.113271

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.772
ELB improved by 0.111486

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.662
ELB improved by 0.109377

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.556
ELB improved by 0.106712

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.452
ELB improved by 0.103362

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.353
ELB improved by 0.0992761

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.259
ELB improved by 0.0944835

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.169
ELB improved by 0.0890749

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.086
ELB improved by 0.0831894

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.009
ELB improved by 0.0769941

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.939
ELB improved by 0.0706633

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.874
ELB improved by 0.0643615

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.816
ELB improved by 0.0582299

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.764
ELB improved by 0.0523793

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.717
ELB improved by 0.0468888

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.675
ELB improved by 0.0418078

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.638
ELB improved by 0.0371606

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.605
ELB improved by 0.0329516

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.576
ELB improved by 0.0291708

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.55
ELB improved by 0.0257981

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.527
ELB improved by 0.0228071

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.507
ELB improved by 0.0201677

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.489
ELB improved by 0.0178483

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.473
ELB improved by 0.0158172

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.459
ELB improved by 0.0140435

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.447
ELB improved by 0.0124981

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.436
ELB improved by 0.0111538

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.426
ELB improved by 0.00998577

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  5.437   0.515   5.948

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.087	0.043	0.131
getPIPs	0.075	0.037	0.116
graper	0.123	0.053	0.176
makeExampleData	0.017	0.003	0.020
makeExampleDataWithUnequalGroups	0.043	0.006	0.049
plotELBO	0.608	0.044	0.654
plotGroupPenalties	2.609	0.123	2.743
plotPosterior	1.581	0.043	1.629
predict.graper	2.951	0.254	3.298
print.graper	0.075	0.042	0.116