Britta Velten
| Snapshot Date: 2025-11-24 13:45 -0500 (Mon, 24 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-27 12:03 -0500 (Thu, 27 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4876 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble" | 4656 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4602 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4668 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | NA | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-25 05:22:18 -0500 (Tue, 25 Nov 2025) |
| EndedAt: 2025-11-25 05:24:33 -0500 (Tue, 25 Nov 2025) |
| EllapsedTime: 135.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 Patched (2025-11-05 r88990)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-900.189
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.915
ELB improved by 321.273
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.453
ELB improved by 56.4619
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.728
ELB improved by 33.7252
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.049
ELB improved by 13.6789
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.437
ELB improved by 5.61229
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.106
ELB improved by 3.33091
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.424
ELB improved by 2.68229
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.913
ELB improved by 2.51025
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.444
ELB improved by 2.46933
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.98
ELB improved by 2.46461
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.53
ELB improved by 2.44981
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.147
ELB improved by 2.38232
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.919
ELB improved by 2.22831
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.943
ELB improved by 1.97648
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.303
ELB improved by 1.63991
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.043
ELB improved by 1.25951
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.137
ELB improved by 0.905925
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.502
ELB improved by 0.635621
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.047
ELB improved by 0.455114
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.705
ELB improved by 0.34161
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.434
ELB improved by 0.27076
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.208
ELB improved by 0.225728
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.012
ELB improved by 0.196417
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.835
ELB improved by 0.177053
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.671
ELB improved by 0.164394
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.514
ELB improved by 0.156663
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.361
ELB improved by 0.152926
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.208
ELB improved by 0.152711
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.053
ELB improved by 0.155707
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.891
ELB improved by 0.161475
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.722
ELB improved by 0.169184
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.544
ELB improved by 0.17757
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.359
ELB improved by 0.185274
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.168
ELB improved by 0.191371
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.972
ELB improved by 0.195539
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.774
ELB improved by 0.197765
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.576
ELB improved by 0.198023
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.38
ELB improved by 0.196249
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.188
ELB improved by 0.192453
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.001
ELB improved by 0.186806
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.821
ELB improved by 0.17963
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.65
ELB improved by 0.171338
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.488
ELB improved by 0.162358
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.334
ELB improved by 0.153082
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.191
ELB improved by 0.143828
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.056
ELB improved by 0.134835
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.929
ELB improved by 0.126266
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.811
ELB improved by 0.11822
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.701
ELB improved by 0.11075
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.597
ELB improved by 0.103872
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.499
ELB improved by 0.0975765
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.407
ELB improved by 0.0918411
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.321
ELB improved by 0.0866319
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.239
ELB improved by 0.0819101
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.161
ELB improved by 0.0776346
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.087
ELB improved by 0.0737638
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.017
ELB improved by 0.070257
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.95
ELB improved by 0.0670752
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.886
ELB improved by 0.0641815
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.824
ELB improved by 0.0615418
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.765
ELB improved by 0.0591246
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.708
ELB improved by 0.0569017
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.653
ELB improved by 0.0548483
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.6
ELB improved by 0.0529438
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.549
ELB improved by 0.0511725
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.5
ELB improved by 0.0495244
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.452
ELB improved by 0.0479972
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.405
ELB improved by 0.0465983
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.36
ELB improved by 0.045349
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.315
ELB improved by 0.0442904
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.272
ELB improved by 0.0434948
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.229
ELB improved by 0.0430841
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.186
ELB improved by 0.0432654
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.141
ELB improved by 0.0443961
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.094
ELB improved by 0.0471035
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.042
ELB improved by 0.0524956
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.979
ELB improved by 0.0624677
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.899
ELB improved by 0.0798724
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.792
ELB improved by 0.107492
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.648
ELB improved by 0.143816
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.47
ELB improved by 0.17793
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.274
ELB improved by 0.19624
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.076
ELB improved by 0.197599
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.886
ELB improved by 0.190169
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.706
ELB improved by 0.179836
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.538
ELB improved by 0.168664
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.38
ELB improved by 0.157185
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.235
ELB improved by 0.145574
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.101
ELB improved by 0.133974
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.978
ELB improved by 0.122593
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.867
ELB improved by 0.111727
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.765
ELB improved by 0.101748
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.672
ELB improved by 0.0930706
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.586
ELB improved by 0.0860837
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.505
ELB improved by 0.0810709
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.426
ELB improved by 0.078097
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.35
ELB improved by 0.076844
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.273
ELB improved by 0.0764245
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.198
ELB improved by 0.0753689
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.126
ELB improved by 0.0721179
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.06
ELB improved by 0.0659828
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.002
ELB improved by 0.0576813
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.953
ELB improved by 0.0487085
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.913
ELB improved by 0.0402869
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.88
ELB improved by 0.0329666
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.853
ELB improved by 0.0268285
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.831
ELB improved by 0.0217662
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.814
ELB improved by 0.0176369
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.8
ELB improved by 0.0143077
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.788
ELB improved by 0.0116603
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.778
ELB improved by 0.00958566
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.05
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.404
ELB improved by 300.646
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.224
ELB improved by 55.18
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-491.588
ELB improved by 37.636
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.91
ELB improved by 18.6777
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.873
ELB improved by 8.03684
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.553
ELB improved by 4.32034
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.219
ELB improved by 3.3337
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.165
ELB improved by 3.05477
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.177
ELB improved by 2.98718
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.205
ELB improved by 2.97241
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.261
ELB improved by 2.94425
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.379
ELB improved by 2.88186
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.648
ELB improved by 2.73074
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.25
ELB improved by 2.39859
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.34
ELB improved by 1.90932
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.968
ELB improved by 1.3726
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.063
ELB improved by 0.90424
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.485
ELB improved by 0.578382
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.102
ELB improved by 0.383037
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.83
ELB improved by 0.271875
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.623
ELB improved by 0.20756
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.454
ELB improved by 0.168191
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.312
ELB improved by 0.142308
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.188
ELB improved by 0.124089
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.077
ELB improved by 0.110523
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.977
ELB improved by 0.0999776
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.886
ELB improved by 0.0915138
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.801
ELB improved by 0.0845549
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.723
ELB improved by 0.078725
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.649
ELB improved by 0.0737657
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.579
ELB improved by 0.0694908
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.514
ELB improved by 0.0657614
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.451
ELB improved by 0.0624702
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.392
ELB improved by 0.059533
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.335
ELB improved by 0.0568824
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.28
ELB improved by 0.0544638
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.228
ELB improved by 0.0522331
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.178
ELB improved by 0.0501542
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.13
ELB improved by 0.0481978
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.083
ELB improved by 0.0463407
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.039
ELB improved by 0.0445642
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.996
ELB improved by 0.0428537
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.955
ELB improved by 0.0411983
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.915
ELB improved by 0.0395899
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.877
ELB improved by 0.038023
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.841
ELB improved by 0.036494
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.806
ELB improved by 0.0350009
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.772
ELB improved by 0.0335432
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.74
ELB improved by 0.0321211
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.709
ELB improved by 0.0307355
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.68
ELB improved by 0.0293878
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.652
ELB improved by 0.0280794
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.625
ELB improved by 0.0268119
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.599
ELB improved by 0.0255866
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.575
ELB improved by 0.0244049
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.552
ELB improved by 0.0232675
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.53
ELB improved by 0.0221751
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.508
ELB improved by 0.0211281
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.488
ELB improved by 0.0201263
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.469
ELB improved by 0.0191694
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.451
ELB improved by 0.0182568
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.433
ELB improved by 0.0173877
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.417
ELB improved by 0.016561
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.401
ELB improved by 0.0157755
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.386
ELB improved by 0.0150298
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.372
ELB improved by 0.0143225
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.358
ELB improved by 0.013652
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.345
ELB improved by 0.0130169
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.333
ELB improved by 0.0124155
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.321
ELB improved by 0.0118462
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.31
ELB improved by 0.0113075
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.299
ELB improved by 0.0107979
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.288
ELB improved by 0.0103157
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.279
ELB improved by 0.00985966
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-825.691
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.734
ELB improved by 260.958
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.669
ELB improved by 65.0645
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.974
ELB improved by 45.6948
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.638
ELB improved by 21.3363
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.023
ELB improved by 8.61532
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.777
ELB improved by 4.24528
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.156
ELB improved by 2.62184
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.301
ELB improved by 1.85471
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.83
ELB improved by 1.47101
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.547
ELB improved by 1.28333
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.345
ELB improved by 1.20156
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.165
ELB improved by 1.17984
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.971
ELB improved by 1.19373
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.742
ELB improved by 1.22967
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.463
ELB improved by 1.27911
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.128
ELB improved by 1.33457
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.741
ELB improved by 1.38735
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.313
ELB improved by 1.42824
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.86
ELB improved by 1.45256
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.394
ELB improved by 1.46629
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.912
ELB improved by 1.48148
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.416
ELB improved by 1.49592
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.93
ELB improved by 1.48629
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.483
ELB improved by 1.44693
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.06
ELB improved by 1.42335
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.586
ELB improved by 1.47382
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.958
ELB improved by 1.62747
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.107
ELB improved by 1.85171
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.031
ELB improved by 2.07578
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.796
ELB improved by 2.23486
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.649
ELB improved by 2.14754
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.847
ELB improved by 1.80168
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.432
ELB improved by 1.41474
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.323
ELB improved by 1.10892
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.368
ELB improved by 0.955282
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.411
ELB improved by 0.957065
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.495
ELB improved by 0.916148
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.789
ELB improved by 0.706108
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.265
ELB improved by 0.523922
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.813
ELB improved by 0.451171
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.359
ELB improved by 0.45443
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.888
ELB improved by 0.4712
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.433
ELB improved by 0.454757
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.991
ELB improved by 0.44243
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.557
ELB improved by 0.433672
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.204
ELB improved by 0.353075
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.967
ELB improved by 0.237302
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.812
ELB improved by 0.154505
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.706
ELB improved by 0.106008
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.629
ELB improved by 0.0774472
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.569
ELB improved by 0.0598073
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.521
ELB improved by 0.0481584
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.481
ELB improved by 0.0398787
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.447
ELB improved by 0.0336239
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.419
ELB improved by 0.0286969
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.394
ELB improved by 0.0247121
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.372
ELB improved by 0.0214358
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.354
ELB improved by 0.0187135
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.337
ELB improved by 0.0164349
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.323
ELB improved by 0.0145178
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.31
ELB improved by 0.0128979
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.298
ELB improved by 0.0115242
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.288
ELB improved by 0.0103556
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.279
ELB improved by 0.00935834
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.366
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.211
ELB improved by 295.155
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-530.663
ELB improved by 57.5487
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.437
ELB improved by 38.2255
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.21
ELB improved by 17.2269
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.251
ELB improved by 6.95934
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.922
ELB improved by 4.32873
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.119
ELB improved by 3.80349
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.313
ELB improved by 3.806
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.346
ELB improved by 3.96705
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.288
ELB improved by 4.05738
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.441
ELB improved by 3.84689
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.196
ELB improved by 3.24518
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.759
ELB improved by 2.43745
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.054
ELB improved by 1.70501
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.874
ELB improved by 1.18002
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.031
ELB improved by 0.842982
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.4
ELB improved by 0.630727
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.907
ELB improved by 0.492581
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.51
ELB improved by 0.397262
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.183
ELB improved by 0.32749
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.908
ELB improved by 0.274385
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.675
ELB improved by 0.233204
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.474
ELB improved by 0.200898
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.299
ELB improved by 0.175194
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.145
ELB improved by 0.154387
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.007
ELB improved by 0.137247
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.884
ELB improved by 0.122913
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.774
ELB improved by 0.110775
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.673
ELB improved by 0.100395
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.582
ELB improved by 0.091448
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.498
ELB improved by 0.0836828
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.421
ELB improved by 0.0769041
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.35
ELB improved by 0.070955
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.285
ELB improved by 0.0657085
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.223
ELB improved by 0.0610605
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.167
ELB improved by 0.0569245
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.113
ELB improved by 0.0532287
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.063
ELB improved by 0.0499127
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.016
ELB improved by 0.0469255
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.972
ELB improved by 0.0442239
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.93
ELB improved by 0.0417709
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.891
ELB improved by 0.039535
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.853
ELB improved by 0.0374892
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.818
ELB improved by 0.0356101
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.784
ELB improved by 0.0338775
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.752
ELB improved by 0.032274
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.721
ELB improved by 0.0307845
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.692
ELB improved by 0.0293961
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.663
ELB improved by 0.0280974
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.637
ELB improved by 0.0268785
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.611
ELB improved by 0.0257311
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.586
ELB improved by 0.0246478
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.563
ELB improved by 0.0236224
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.54
ELB improved by 0.0226494
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.518
ELB improved by 0.0217242
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.497
ELB improved by 0.0208429
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.477
ELB improved by 0.0200021
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.458
ELB improved by 0.0191991
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.44
ELB improved by 0.0184313
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.422
ELB improved by 0.0176967
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.405
ELB improved by 0.0169937
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.389
ELB improved by 0.0163209
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.373
ELB improved by 0.015677
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.358
ELB improved by 0.0150609
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.343
ELB improved by 0.0144719
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.33
ELB improved by 0.013909
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.316
ELB improved by 0.0133717
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.303
ELB improved by 0.0128592
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.291
ELB improved by 0.012371
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.279
ELB improved by 0.0119065
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.268
ELB improved by 0.0114651
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.257
ELB improved by 0.0110463
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.246
ELB improved by 0.0106494
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.236
ELB improved by 0.0102739
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.226
ELB improved by 0.00991921
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
5.431 0.504 6.417
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.083 | 0.041 | 0.126 | |
| getPIPs | 0.077 | 0.038 | 0.115 | |
| graper | 0.125 | 0.053 | 0.179 | |
| makeExampleData | 0.018 | 0.003 | 0.021 | |
| makeExampleDataWithUnequalGroups | 0.042 | 0.005 | 0.050 | |
| plotELBO | 0.621 | 0.045 | 0.672 | |
| plotGroupPenalties | 2.633 | 0.131 | 2.784 | |
| plotPosterior | 1.608 | 0.051 | 1.669 | |
| predict.graper | 2.946 | 0.240 | 3.310 | |
| print.graper | 0.073 | 0.038 | 0.113 | |