Britta Velten
| Snapshot Date: 2025-11-05 13:45 -0500 (Wed, 05 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-06 12:00 -0500 (Thu, 06 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4902 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4638 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-06 00:21:21 -0500 (Thu, 06 Nov 2025) |
| EndedAt: 2025-11-06 00:22:52 -0500 (Thu, 06 Nov 2025) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.132
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-593.496
ELB improved by 276.635
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-537.802
ELB improved by 55.6943
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.063
ELB improved by 44.7391
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.993
ELB improved by 22.0697
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.786
ELB improved by 8.2072
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.822
ELB improved by 3.96361
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.971
ELB improved by 2.85129
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.54
ELB improved by 2.43081
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.375
ELB improved by 2.16563
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.43
ELB improved by 1.94513
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.692
ELB improved by 1.73799
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.156
ELB improved by 1.53558
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.819
ELB improved by 1.33685
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.675
ELB improved by 1.144
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.714
ELB improved by 0.961102
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.921
ELB improved by 0.793192
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.276
ELB improved by 0.645086
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.756
ELB improved by 0.52
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.337
ELB improved by 0.418657
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.998
ELB improved by 0.339329
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.719
ELB improved by 0.278679
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.486
ELB improved by 0.232809
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.288
ELB improved by 0.198053
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.117
ELB improved by 0.171391
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.966
ELB improved by 0.150536
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.833
ELB improved by 0.133856
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.712
ELB improved by 0.120228
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.603
ELB improved by 0.108892
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.504
ELB improved by 0.0993287
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.413
ELB improved by 0.0911821
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.329
ELB improved by 0.0841963
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.25
ELB improved by 0.0781825
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.178
ELB improved by 0.0729963
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.109
ELB improved by 0.0685241
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.044
ELB improved by 0.0646748
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.983
ELB improved by 0.0613741
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.924
ELB improved by 0.0585611
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.868
ELB improved by 0.0561855
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.814
ELB improved by 0.0542064
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.761
ELB improved by 0.0525901
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.71
ELB improved by 0.0513097
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.66
ELB improved by 0.050344
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.61
ELB improved by 0.0496767
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.561
ELB improved by 0.0492958
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.512
ELB improved by 0.0491935
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.462
ELB improved by 0.0493655
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.412
ELB improved by 0.049811
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.362
ELB improved by 0.0505325
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.31
ELB improved by 0.0515355
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.257
ELB improved by 0.0528286
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.203
ELB improved by 0.0544238
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.147
ELB improved by 0.0563364
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.088
ELB improved by 0.058585
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.027
ELB improved by 0.0611928
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.963
ELB improved by 0.0641874
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.895
ELB improved by 0.0676024
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.824
ELB improved by 0.0714791
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.748
ELB improved by 0.0758688
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.667
ELB improved by 0.0808361
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.581
ELB improved by 0.0864641
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.488
ELB improved by 0.092861
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.387
ELB improved by 0.100169
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.279
ELB improved by 0.108573
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.161
ELB improved by 0.118315
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.031
ELB improved by 0.129706
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.888
ELB improved by 0.143133
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.729
ELB improved by 0.159071
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.551
ELB improved by 0.178084
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.35
ELB improved by 0.200833
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.122
ELB improved by 0.228109
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.861
ELB improved by 0.260928
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.56
ELB improved by 0.300723
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.21
ELB improved by 0.349665
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.799
ELB improved by 0.411033
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.31
ELB improved by 0.489213
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.722
ELB improved by 0.588002
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.017
ELB improved by 0.704701
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.194
ELB improved by 0.823091
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.272
ELB improved by 0.922084
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.285
ELB improved by 0.987428
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.289
ELB improved by 0.995494
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.359
ELB improved by 0.929886
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.539
ELB improved by 0.820762
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.801
ELB improved by 0.737736
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.038
ELB improved by 0.762992
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.08
ELB improved by 0.957687
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.759
ELB improved by 1.32136
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.037
ELB improved by 1.72232
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.264
ELB improved by 1.77292
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.791
ELB improved by 1.4722
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.629
ELB improved by 1.16284
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.723
ELB improved by 0.905643
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.025
ELB improved by 0.697911
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.505
ELB improved by 0.519722
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.159
ELB improved by 0.346556
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.945
ELB improved by 0.213847
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.811
ELB improved by 0.133569
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.721
ELB improved by 0.0903389
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.651
ELB improved by 0.0696608
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.587
ELB improved by 0.0642809
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.513
ELB improved by 0.0741367
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.404
ELB improved by 0.108545
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.214
ELB improved by 0.190315
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.885
ELB improved by 0.329376
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.474
ELB improved by 0.410332
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.154
ELB improved by 0.320341
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.946
ELB improved by 0.207782
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.791
ELB improved by 0.155622
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.661
ELB improved by 0.129825
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.56
ELB improved by 0.100758
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.49
ELB improved by 0.0702248
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.441
ELB improved by 0.0486429
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.403
ELB improved by 0.0381774
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.366
ELB improved by 0.037416
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.318
ELB improved by 0.0474989
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.244
ELB improved by 0.0743026
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.12
ELB improved by 0.124092
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.94
ELB improved by 0.179981
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.748
ELB improved by 0.191973
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.595
ELB improved by 0.152694
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.489
ELB improved by 0.106156
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.414
ELB improved by 0.0743916
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.357
ELB improved by 0.0571277
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.308
ELB improved by 0.0496413
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.26
ELB improved by 0.0476923
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.213
ELB improved by 0.0475019
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.167
ELB improved by 0.0455951
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.127
ELB improved by 0.0400009
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.095
ELB improved by 0.0315036
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.073
ELB improved by 0.0226543
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.057
ELB improved by 0.0154979
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.047
ELB improved by 0.010631
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.039
ELB improved by 0.00771346
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.219
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.65
ELB improved by 283.569
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.451
ELB improved by 58.1994
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.541
ELB improved by 38.9094
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.031
ELB improved by 19.5098
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.222
ELB improved by 8.80902
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.303
ELB improved by 4.91957
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.257
ELB improved by 4.04605
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.09
ELB improved by 4.16707
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.333
ELB improved by 4.75616
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.877
ELB improved by 5.45615
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.214
ELB improved by 5.66314
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.342
ELB improved by 4.87204
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.928
ELB improved by 3.41384
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.826
ELB improved by 2.10245
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.54
ELB improved by 1.28581
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.691
ELB improved by 0.848696
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.077
ELB improved by 0.614409
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.598
ELB improved by 0.479187
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.203
ELB improved by 0.394279
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.866
ELB improved by 0.337108
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.57
ELB improved by 0.296497
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.303
ELB improved by 0.266457
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.06
ELB improved by 0.243556
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.834
ELB improved by 0.225726
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.622
ELB improved by 0.211672
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.422
ELB improved by 0.200577
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.23
ELB improved by 0.191928
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.044
ELB improved by 0.185428
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.864
ELB improved by 0.18093
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.685
ELB improved by 0.178427
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.507
ELB improved by 0.178059
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.327
ELB improved by 0.180176
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.141
ELB improved by 0.185422
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.947
ELB improved by 0.194847
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.737
ELB improved by 0.209961
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.504
ELB improved by 0.232423
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.241
ELB improved by 0.262829
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.943
ELB improved by 0.298822
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.606
ELB improved by 0.336816
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.224
ELB improved by 0.381958
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.769
ELB improved by 0.455226
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.188
ELB improved by 0.581052
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.44
ELB improved by 0.747906
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.557
ELB improved by 0.883065
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.602
ELB improved by 0.954305
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.588
ELB improved by 1.01462
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.48
ELB improved by 1.10724
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.249
ELB improved by 1.23115
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.938
ELB improved by 1.31129
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.75
ELB improved by 1.18831
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.788
ELB improved by 0.961401
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.94
ELB improved by 0.848657
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.136
ELB improved by 0.803134
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.467
ELB improved by 0.669286
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.948
ELB improved by 0.519338
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.536
ELB improved by 0.411519
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.225
ELB improved by 0.311467
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.012
ELB improved by 0.212757
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.877
ELB improved by 0.135389
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.79
ELB improved by 0.0868806
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.731
ELB improved by 0.0592814
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.687
ELB improved by 0.0435268
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.653
ELB improved by 0.0340192
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.625
ELB improved by 0.0278246
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.602
ELB improved by 0.0234667
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.581
ELB improved by 0.0201981
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.564
ELB improved by 0.0176275
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.548
ELB improved by 0.0155381
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.535
ELB improved by 0.013802
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.522
ELB improved by 0.0123375
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.511
ELB improved by 0.0110893
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.501
ELB improved by 0.0100172
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.492
ELB improved by 0.00909135
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.755
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.315
ELB improved by 289.44
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.113
ELB improved by 63.2016
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.964
ELB improved by 41.1491
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.71
ELB improved by 17.2543
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.223
ELB improved by 6.48736
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.145
ELB improved by 4.07816
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.594
ELB improved by 3.55027
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.115
ELB improved by 3.47964
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.485
ELB improved by 3.62928
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.567
ELB improved by 3.91805
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.316
ELB improved by 4.25107
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.892
ELB improved by 4.42398
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.671
ELB improved by 4.2212
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408
ELB improved by 3.67071
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.03
ELB improved by 2.97052
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.817
ELB improved by 2.21274
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.273
ELB improved by 1.54438
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.215
ELB improved by 1.05787
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.502
ELB improved by 0.713005
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.022
ELB improved by 0.479955
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.687
ELB improved by 0.335349
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.439
ELB improved by 0.247858
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.246
ELB improved by 0.192995
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.089
ELB improved by 0.156603
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.958
ELB improved by 0.131173
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.845
ELB improved by 0.11264
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.747
ELB improved by 0.0986767
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.659
ELB improved by 0.0878717
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.579
ELB improved by 0.0793312
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.507
ELB improved by 0.0724658
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.44
ELB improved by 0.0668733
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.378
ELB improved by 0.06227
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.319
ELB improved by 0.0584501
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.264
ELB improved by 0.0552611
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.211
ELB improved by 0.052587
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.161
ELB improved by 0.0503389
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.113
ELB improved by 0.0484475
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.066
ELB improved by 0.0468583
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.02
ELB improved by 0.0455285
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.976
ELB improved by 0.0444245
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.932
ELB improved by 0.0435201
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.89
ELB improved by 0.042795
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.847
ELB improved by 0.0422341
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.805
ELB improved by 0.0418265
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.764
ELB improved by 0.0415651
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.722
ELB improved by 0.0414457
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.681
ELB improved by 0.0414673
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.639
ELB improved by 0.0416311
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.597
ELB improved by 0.0419409
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.555
ELB improved by 0.0424028
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.512
ELB improved by 0.0430252
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.468
ELB improved by 0.043819
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.423
ELB improved by 0.0447976
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.377
ELB improved by 0.045978
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.33
ELB improved by 0.0473809
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.281
ELB improved by 0.0490319
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.23
ELB improved by 0.0509637
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.177
ELB improved by 0.0532179
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.121
ELB improved by 0.055849
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.062
ELB improved by 0.05893
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.999
ELB improved by 0.0625594
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.933
ELB improved by 0.0668719
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.861
ELB improved by 0.0720499
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.782
ELB improved by 0.0783319
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.696
ELB improved by 0.0860053
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.601
ELB improved by 0.0953527
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.494
ELB improved by 0.106506
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.375
ELB improved by 0.119175
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.243
ELB improved by 0.13234
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.099
ELB improved by 0.144236
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.946
ELB improved by 0.153006
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.788
ELB improved by 0.157855
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.628
ELB improved by 0.159597
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.468
ELB improved by 0.159872
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.308
ELB improved by 0.159886
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.148
ELB improved by 0.159951
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.989
ELB improved by 0.159819
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.83
ELB improved by 0.15911
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.672
ELB improved by 0.157522
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.517
ELB improved by 0.154884
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.366
ELB improved by 0.151148
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.22
ELB improved by 0.146383
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.079
ELB improved by 0.140766
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.944
ELB improved by 0.134562
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.816
ELB improved by 0.128106
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.694
ELB improved by 0.121763
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.579
ELB improved by 0.115875
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.468
ELB improved by 0.110714
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.361
ELB improved by 0.106434
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.258
ELB improved by 0.103049
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.158
ELB improved by 0.100408
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.06
ELB improved by 0.0981825
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.964
ELB improved by 0.0958743
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.871
ELB improved by 0.0929207
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.782
ELB improved by 0.0889343
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.698
ELB improved by 0.084031
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.619
ELB improved by 0.0790149
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.544
ELB improved by 0.0752224
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.47
ELB improved by 0.0741896
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.392
ELB improved by 0.0775057
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.305
ELB improved by 0.0868635
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.202
ELB improved by 0.103525
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.076
ELB improved by 0.125545
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.933
ELB improved by 0.142852
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.793
ELB improved by 0.139914
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.679
ELB improved by 0.113826
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.599
ELB improved by 0.0800508
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.547
ELB improved by 0.0528332
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.511
ELB improved by 0.0352257
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.487
ELB improved by 0.0247002
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.468
ELB improved by 0.0183867
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.454
ELB improved by 0.0144237
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.442
ELB improved by 0.0117839
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.432
ELB improved by 0.00992327
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.671
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.719
ELB improved by 284.951
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.139
ELB improved by 58.5804
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.368
ELB improved by 41.7712
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.49
ELB improved by 20.8775
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.86
ELB improved by 8.62993
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.529
ELB improved by 5.33095
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.637
ELB improved by 4.89246
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.413
ELB improved by 5.22445
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.624
ELB improved by 5.78844
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.637
ELB improved by 5.98746
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.335
ELB improved by 5.30144
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.409
ELB improved by 3.92607
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.772
ELB improved by 2.63712
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.956
ELB improved by 1.81644
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.599
ELB improved by 1.35642
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.492
ELB improved by 1.10712
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.506
ELB improved by 0.986034
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.604
ELB improved by 0.901626
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.774
ELB improved by 0.83078
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.961
ELB improved by 0.812952
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.108
ELB improved by 0.852329
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.17
ELB improved by 0.937891
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.099
ELB improved by 1.07147
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.827
ELB improved by 1.27152
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.269
ELB improved by 1.55803
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.384
ELB improved by 1.88581
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.242
ELB improved by 2.14154
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.973
ELB improved by 2.26931
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.757
ELB improved by 2.21568
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.801
ELB improved by 1.95632
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.23
ELB improved by 1.57096
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.05
ELB improved by 1.17992
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.185
ELB improved by 0.864951
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.538
ELB improved by 0.647279
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.032
ELB improved by 0.505358
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.625
ELB improved by 0.40774
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.291
ELB improved by 0.333164
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.019
ELB improved by 0.272724
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.796
ELB improved by 0.222779
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.616
ELB improved by 0.180117
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.473
ELB improved by 0.142699
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.362
ELB improved by 0.110692
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.277
ELB improved by 0.085108
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.211
ELB improved by 0.066056
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.159
ELB improved by 0.0524697
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.116
ELB improved by 0.042847
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.08
ELB improved by 0.0358776
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.049
ELB improved by 0.0306389
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.023
ELB improved by 0.0265453
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386
ELB improved by 0.0232394
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.979
ELB improved by 0.020502
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.961
ELB improved by 0.0181945
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.945
ELB improved by 0.0162246
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.93
ELB improved by 0.014528
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.917
ELB improved by 0.0130571
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.905
ELB improved by 0.0117755
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.895
ELB improved by 0.0106545
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.885
ELB improved by 0.00967069
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.231 0.184 2.405
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.054 | 0.004 | 0.058 | |
| getPIPs | 0.050 | 0.001 | 0.052 | |
| graper | 0.081 | 0.002 | 0.084 | |
| makeExampleData | 0.009 | 0.002 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.001 | 0.013 | |
| plotELBO | 0.344 | 0.015 | 0.359 | |
| plotGroupPenalties | 1.138 | 0.054 | 1.191 | |
| plotPosterior | 0.639 | 0.009 | 0.649 | |
| predict.graper | 2.069 | 0.020 | 2.090 | |
| print.graper | 0.046 | 0.005 | 0.052 | |