Britta Velten
| Snapshot Date: 2025-11-24 13:45 -0500 (Mon, 24 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-27 12:02 -0500 (Thu, 27 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4876 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble" | 4656 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4602 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4668 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | NA | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-26 00:42:10 -0500 (Wed, 26 Nov 2025) |
| EndedAt: 2025-11-26 00:43:41 -0500 (Wed, 26 Nov 2025) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.338
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.821
ELB improved by 276.517
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.139
ELB improved by 61.6815
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.122
ELB improved by 36.0175
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.327
ELB improved by 15.795
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.564
ELB improved by 7.76325
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.235
ELB improved by 5.32847
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.421
ELB improved by 4.81391
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.639
ELB improved by 4.78186
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.898
ELB improved by 4.74128
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.452
ELB improved by 4.44633
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.641
ELB improved by 3.81098
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.704
ELB improved by 2.93717
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.63
ELB improved by 2.07401
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.217
ELB improved by 1.41293
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.237
ELB improved by 0.979377
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.522
ELB improved by 0.715015
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.967
ELB improved by 0.555234
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.516
ELB improved by 0.451469
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.144
ELB improved by 0.371965
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.842
ELB improved by 0.301952
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.601
ELB improved by 0.240491
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.411
ELB improved by 0.190656
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.258
ELB improved by 0.152875
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.133
ELB improved by 0.125044
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.028
ELB improved by 0.104465
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.939
ELB improved by 0.0888931
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.862
ELB improved by 0.0767519
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.795
ELB improved by 0.0670103
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.736
ELB improved by 0.0590076
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.684
ELB improved by 0.0523133
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.638
ELB improved by 0.0466365
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.596
ELB improved by 0.0417719
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.558
ELB improved by 0.0375685
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.524
ELB improved by 0.0339117
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.494
ELB improved by 0.0307116
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.466
ELB improved by 0.0278968
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.44
ELB improved by 0.0254098
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.417
ELB improved by 0.0232031
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.396
ELB improved by 0.0212379
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.376
ELB improved by 0.0194816
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.358
ELB improved by 0.0179069
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.342
ELB improved by 0.016491
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.327
ELB improved by 0.0152143
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.313
ELB improved by 0.0140601
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.3
ELB improved by 0.0130143
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.288
ELB improved by 0.0120645
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.276
ELB improved by 0.0112001
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.266
ELB improved by 0.0104119
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.256
ELB improved by 0.00969178
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.708
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-594.322
ELB improved by 278.386
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.16
ELB improved by 63.1623
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.548
ELB improved by 44.6115
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.412
ELB improved by 21.1363
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.348
ELB improved by 9.06386
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.434
ELB improved by 5.91406
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.068
ELB improved by 5.36634
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.549
ELB improved by 5.51859
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.037
ELB improved by 5.51268
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.165
ELB improved by 4.87175
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.46
ELB improved by 3.70471
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.942
ELB improved by 2.51804
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.309
ELB improved by 1.6335
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.252
ELB improved by 1.05665
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.556
ELB improved by 0.695632
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.081
ELB improved by 0.475172
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.738
ELB improved by 0.342682
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.476
ELB improved by 0.262381
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.264
ELB improved by 0.21208
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.085
ELB improved by 0.179085
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.928
ELB improved by 0.156383
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.788
ELB improved by 0.140079
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.66
ELB improved by 0.127936
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.542
ELB improved by 0.118604
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.431
ELB improved by 0.111226
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.325
ELB improved by 0.105231
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.225
ELB improved by 0.100228
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.129
ELB improved by 0.0959392
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.037
ELB improved by 0.0921677
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.948
ELB improved by 0.0887738
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.863
ELB improved by 0.0856595
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.78
ELB improved by 0.0827578
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.7
ELB improved by 0.0800248
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.622
ELB improved by 0.0774333
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.547
ELB improved by 0.0749681
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.475
ELB improved by 0.0726217
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.404
ELB improved by 0.0703916
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.336
ELB improved by 0.0682772
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.27
ELB improved by 0.0662792
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.205
ELB improved by 0.0643973
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.143
ELB improved by 0.0626304
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.082
ELB improved by 0.0609759
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.022
ELB improved by 0.0594297
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.964
ELB improved by 0.0579867
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.908
ELB improved by 0.0566404
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.852
ELB improved by 0.0553839
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.798
ELB improved by 0.0542101
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.745
ELB improved by 0.0531118
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.693
ELB improved by 0.0520823
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.642
ELB improved by 0.0511156
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.592
ELB improved by 0.0502066
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.542
ELB improved by 0.0493515
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.494
ELB improved by 0.0485478
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.446
ELB improved by 0.0477945
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.399
ELB improved by 0.0470921
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.352
ELB improved by 0.0464431
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.307
ELB improved by 0.0458513
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.261
ELB improved by 0.0453226
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.216
ELB improved by 0.0448645
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.172
ELB improved by 0.0444861
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.128
ELB improved by 0.0441985
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.084
ELB improved by 0.0440139
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.04
ELB improved by 0.0439462
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.996
ELB improved by 0.0440107
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.952
ELB improved by 0.0442232
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.907
ELB improved by 0.0446005
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.862
ELB improved by 0.0451589
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.816
ELB improved by 0.0459139
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.769
ELB improved by 0.0468788
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.721
ELB improved by 0.0480634
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.671
ELB improved by 0.0494725
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.62
ELB improved by 0.0511046
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.567
ELB improved by 0.0529503
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.512
ELB improved by 0.0549922
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.455
ELB improved by 0.0572043
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.396
ELB improved by 0.0595529
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.334
ELB improved by 0.0619969
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.269
ELB improved by 0.0644883
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.202
ELB improved by 0.0669722
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.133
ELB improved by 0.0693858
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.061
ELB improved by 0.0716581
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.987
ELB improved by 0.0737099
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.912
ELB improved by 0.075455
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.835
ELB improved by 0.0768044
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.757
ELB improved by 0.0776717
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.68
ELB improved by 0.0779807
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.602
ELB improved by 0.0776742
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.525
ELB improved by 0.076721
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.45
ELB improved by 0.075122
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.377
ELB improved by 0.0729121
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.307
ELB improved by 0.0701575
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.24
ELB improved by 0.0669494
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.177
ELB improved by 0.0633956
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.117
ELB improved by 0.0596099
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.061
ELB improved by 0.0557035
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.009
ELB improved by 0.0517776
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.962
ELB improved by 0.0479186
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.917
ELB improved by 0.0441956
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.877
ELB improved by 0.0406603
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.839
ELB improved by 0.0373476
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.805
ELB improved by 0.0342774
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.774
ELB improved by 0.0314575
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.745
ELB improved by 0.0288851
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.718
ELB improved by 0.0265505
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.694
ELB improved by 0.0244383
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.671
ELB improved by 0.0225304
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.65
ELB improved by 0.0208076
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.631
ELB improved by 0.0192506
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.613
ELB improved by 0.0178414
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.597
ELB improved by 0.0165639
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.581
ELB improved by 0.0154036
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.567
ELB improved by 0.014348
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.554
ELB improved by 0.0133865
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.541
ELB improved by 0.0125096
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.529
ELB improved by 0.0117091
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.518
ELB improved by 0.0109777
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.508
ELB improved by 0.0103087
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.498
ELB improved by 0.0096962
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-933.283
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.701
ELB improved by 348.582
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.288
ELB improved by 57.413
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.282
ELB improved by 32.006
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.252
ELB improved by 13.03
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.693
ELB improved by 6.55934
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.651
ELB improved by 5.04175
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.696
ELB improved by 4.9548
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.352
ELB improved by 5.34445
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.631
ELB improved by 5.72025
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.049
ELB improved by 5.58233
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.327
ELB improved by 4.72263
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.83
ELB improved by 3.49625
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.401
ELB improved by 2.42877
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.672
ELB improved by 1.72907
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.343
ELB improved by 1.32965
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.23
ELB improved by 1.11327
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.236
ELB improved by 0.993305
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.321
ELB improved by 0.914937
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.482
ELB improved by 0.839294
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.732
ELB improved by 0.750136
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.071
ELB improved by 0.661134
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.459
ELB improved by 0.611349
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.864
ELB improved by 0.595536
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.315
ELB improved by 0.548835
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.868
ELB improved by 0.446878
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.528
ELB improved by 0.340186
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.266
ELB improved by 0.261431
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.059
ELB improved by 0.207069
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.892
ELB improved by 0.167365
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.755
ELB improved by 0.1366
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.643
ELB improved by 0.11219
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.55
ELB improved by 0.0928556
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.473
ELB improved by 0.0776749
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.407
ELB improved by 0.065812
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.35
ELB improved by 0.0565109
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.301
ELB improved by 0.0491389
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.258
ELB improved by 0.0432049
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.22
ELB improved by 0.0383466
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.185
ELB improved by 0.0343034
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.155
ELB improved by 0.0308896
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.127
ELB improved by 0.0279715
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.101
ELB improved by 0.0254515
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.078
ELB improved by 0.0232565
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.057
ELB improved by 0.0213311
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.037
ELB improved by 0.019632
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.019
ELB improved by 0.018125
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.002
ELB improved by 0.0167824
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.986
ELB improved by 0.0155817
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.972
ELB improved by 0.0145042
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.958
ELB improved by 0.0135345
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.946
ELB improved by 0.0126592
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.934
ELB improved by 0.0118672
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.923
ELB improved by 0.011149
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.912
ELB improved by 0.0104962
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.902
ELB improved by 0.00990171
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.414
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.328
ELB improved by 312.085
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.379
ELB improved by 52.9485
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.187
ELB improved by 30.1924
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.532
ELB improved by 13.6553
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.649
ELB improved by 6.88272
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.507
ELB improved by 5.14238
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.622
ELB improved by 4.88467
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.541
ELB improved by 5.08055
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.232
ELB improved by 5.30946
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.123
ELB improved by 5.10916
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.906
ELB improved by 4.21648
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.96
ELB improved by 2.94663
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.103
ELB improved by 1.85634
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.932
ELB improved by 1.17169
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.131
ELB improved by 0.801025
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.533
ELB improved by 0.597242
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.067
ELB improved by 0.466266
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.7
ELB improved by 0.367583
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.407
ELB improved by 0.292092
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.17
ELB improved by 0.237738
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.97
ELB improved by 0.199598
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.798
ELB improved by 0.172127
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.647
ELB improved by 0.151434
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.511
ELB improved by 0.135243
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.389
ELB improved by 0.12224
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.277
ELB improved by 0.111619
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.175
ELB improved by 0.102842
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.079
ELB improved by 0.0955259
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.99
ELB improved by 0.089387
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.906
ELB improved by 0.0842071
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.826
ELB improved by 0.0798157
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.75
ELB improved by 0.0760766
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.677
ELB improved by 0.07288
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.607
ELB improved by 0.0701361
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.539
ELB improved by 0.0677707
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.473
ELB improved by 0.0657218
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.409
ELB improved by 0.0639372
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.347
ELB improved by 0.0623729
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.286
ELB improved by 0.0609913
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.226
ELB improved by 0.0597602
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.167
ELB improved by 0.0586523
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.11
ELB improved by 0.0576442
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.053
ELB improved by 0.0567157
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.997
ELB improved by 0.0558499
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.942
ELB improved by 0.0550323
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.888
ELB improved by 0.0542506
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.834
ELB improved by 0.0534947
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.782
ELB improved by 0.0527558
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.73
ELB improved by 0.0520267
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.678
ELB improved by 0.0513011
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.628
ELB improved by 0.050574
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.578
ELB improved by 0.0498406
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.529
ELB improved by 0.049097
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.48
ELB improved by 0.0483396
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.433
ELB improved by 0.0475651
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.386
ELB improved by 0.0467706
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.34
ELB improved by 0.0459535
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.295
ELB improved by 0.0451115
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.251
ELB improved by 0.0442429
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.207
ELB improved by 0.0433463
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.165
ELB improved by 0.0424212
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.124
ELB improved by 0.0414676
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.083
ELB improved by 0.0404866
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.044
ELB improved by 0.0394797
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.005
ELB improved by 0.0384499
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.968
ELB improved by 0.0374004
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.931
ELB improved by 0.0363355
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.896
ELB improved by 0.0352602
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.862
ELB improved by 0.0341797
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.829
ELB improved by 0.0330999
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.797
ELB improved by 0.0320265
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.766
ELB improved by 0.0309655
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.736
ELB improved by 0.0299224
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.707
ELB improved by 0.0289026
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.679
ELB improved by 0.027911
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.652
ELB improved by 0.0269519
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.626
ELB improved by 0.0260291
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.601
ELB improved by 0.0251457
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.577
ELB improved by 0.0243043
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.553
ELB improved by 0.0235066
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.53
ELB improved by 0.0227542
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.508
ELB improved by 0.0220478
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.487
ELB improved by 0.0213878
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.466
ELB improved by 0.0207742
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.446
ELB improved by 0.0202067
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.426
ELB improved by 0.0196848
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.407
ELB improved by 0.0192075
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.388
ELB improved by 0.0187739
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.37
ELB improved by 0.018383
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.352
ELB improved by 0.0180335
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.334
ELB improved by 0.0177242
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.317
ELB improved by 0.0174539
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.3
ELB improved by 0.0172213
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.283
ELB improved by 0.0170251
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.266
ELB improved by 0.0168641
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.249
ELB improved by 0.0167369
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.232
ELB improved by 0.0166424
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.216
ELB improved by 0.0165791
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.199
ELB improved by 0.0165458
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.183
ELB improved by 0.016541
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.166
ELB improved by 0.0165633
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.149
ELB improved by 0.0166111
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.133
ELB improved by 0.0166826
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.116
ELB improved by 0.016776
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.099
ELB improved by 0.016889
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.082
ELB improved by 0.0170195
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.065
ELB improved by 0.0171648
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.048
ELB improved by 0.0173219
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.03
ELB improved by 0.0174877
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.012
ELB improved by 0.0176585
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.995
ELB improved by 0.0178307
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.977
ELB improved by 0.0179998
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.958
ELB improved by 0.0181617
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.94
ELB improved by 0.0183115
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.922
ELB improved by 0.0184446
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.903
ELB improved by 0.0185561
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.885
ELB improved by 0.0186413
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.866
ELB improved by 0.0186955
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.847
ELB improved by 0.0187146
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.828
ELB improved by 0.0186948
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.81
ELB improved by 0.0186328
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.791
ELB improved by 0.0185262
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.773
ELB improved by 0.0183734
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.755
ELB improved by 0.0181733
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.737
ELB improved by 0.0179261
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.719
ELB improved by 0.0176326
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.702
ELB improved by 0.0172946
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.685
ELB improved by 0.0169148
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.668
ELB improved by 0.0164966
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.652
ELB improved by 0.0160441
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.637
ELB improved by 0.0155621
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.622
ELB improved by 0.0150563
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.607
ELB improved by 0.0145327
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.593
ELB improved by 0.0139979
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.58
ELB improved by 0.0134593
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.567
ELB improved by 0.0129243
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.554
ELB improved by 0.012401
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.543
ELB improved by 0.0118975
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.531
ELB improved by 0.0114217
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.52
ELB improved by 0.0109809
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.51
ELB improved by 0.0105812
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.499
ELB improved by 0.0102264
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.489
ELB improved by 0.00991688
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.465 0.188 2.644
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.050 | 0.005 | 0.054 | |
| getPIPs | 0.047 | 0.005 | 0.052 | |
| graper | 0.081 | 0.002 | 0.084 | |
| makeExampleData | 0.008 | 0.002 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.013 | |
| plotELBO | 0.312 | 0.021 | 0.335 | |
| plotGroupPenalties | 1.135 | 0.054 | 1.190 | |
| plotPosterior | 0.654 | 0.007 | 0.661 | |
| predict.graper | 2.044 | 0.018 | 2.063 | |
| print.graper | 0.047 | 0.005 | 0.052 | |