Britta Velten
| Snapshot Date: 2025-10-09 13:40 -0400 (Thu, 09 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_21 |
| git_last_commit: fb5f237 |
| git_last_commit_date: 2025-06-24 03:18:49 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-10-13 11:40 -0400 (Mon, 13 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4833 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4614 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4555 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4586 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.24.2 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.24.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz |
| StartedAt: 2025-10-11 00:43:18 -0400 (Sat, 11 Oct 2025) |
| EndedAt: 2025-10-11 00:44:42 -0400 (Sat, 11 Oct 2025) |
| EllapsedTime: 84.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-06-14 r88325)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.5
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.24.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.863
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.705
ELB improved by 304.159
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.477
ELB improved by 58.2279
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.904
ELB improved by 29.5731
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.382
ELB improved by 10.5213
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.969
ELB improved by 4.41341
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.09
ELB improved by 2.87858
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.706
ELB improved by 2.38387
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.538
ELB improved by 2.1686
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.48
ELB improved by 2.05785
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.49
ELB improved by 1.98985
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.557
ELB improved by 1.93283
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.706
ELB improved by 1.85152
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.997
ELB improved by 1.70916
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.503
ELB improved by 1.49387
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.266
ELB improved by 1.23635
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.278
ELB improved by 0.988744
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.492
ELB improved by 0.785975
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.857
ELB improved by 0.634557
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.527747
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.872
ELB improved by 0.457345
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.456
ELB improved by 0.416226
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.057
ELB improved by 0.39849
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.658
ELB improved by 0.399361
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.243
ELB improved by 0.41512
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.8
ELB improved by 0.44308
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.318
ELB improved by 0.481562
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.788
ELB improved by 0.530073
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.198
ELB improved by 0.590051
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.532
ELB improved by 0.666441
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.763
ELB improved by 0.769029
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.855
ELB improved by 0.907827
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.777
ELB improved by 1.07757
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.513
ELB improved by 1.26385
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.027
ELB improved by 1.48677
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.238
ELB improved by 1.78856
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.056
ELB improved by 2.18247
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.455
ELB improved by 2.60026
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.604
ELB improved by 2.85173
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.863
ELB improved by 2.74073
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.556
ELB improved by 2.30651
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.724
ELB improved by 1.83247
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.246
ELB improved by 1.47748
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.116
ELB improved by 1.1302
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.31
ELB improved by 0.806555
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.741
ELB improved by 0.568542
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.307
ELB improved by 0.434148
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.926
ELB improved by 0.380682
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.569
ELB improved by 0.357365
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.252
ELB improved by 0.316543
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.979
ELB improved by 0.27359
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.719
ELB improved by 0.260165
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.475
ELB improved by 0.243463
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.291
ELB improved by 0.184342
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.173
ELB improved by 0.118044
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.096
ELB improved by 0.0768194
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.041
ELB improved by 0.0554117
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.997
ELB improved by 0.0435568
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.961
ELB improved by 0.0359895
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.93
ELB improved by 0.0305449
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.904
ELB improved by 0.0263258
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.881
ELB improved by 0.0229193
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.861
ELB improved by 0.0201062
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.843
ELB improved by 0.0177522
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.828
ELB improved by 0.015766
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.814
ELB improved by 0.0140802
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.801
ELB improved by 0.0126428
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.789
ELB improved by 0.0114124
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.779
ELB improved by 0.0103553
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.77
ELB improved by 0.00944413
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.186
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.213
ELB improved by 297.973
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.551
ELB improved by 59.6618
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.804
ELB improved by 36.7467
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.467
ELB improved by 16.337
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.158
ELB improved by 7.30891
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.424
ELB improved by 4.73443
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.244
ELB improved by 4.17936
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.041
ELB improved by 4.20368
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.623
ELB improved by 4.41726
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.044
ELB improved by 4.57978
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.629
ELB improved by 4.41488
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.844
ELB improved by 3.78524
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.922
ELB improved by 2.92115
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.746
ELB improved by 2.17623
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.103
ELB improved by 1.64339
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.838
ELB improved by 1.265
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.837
ELB improved by 1.00075
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.02
ELB improved by 0.816691
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.327
ELB improved by 0.693097
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.711
ELB improved by 0.616384
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.139
ELB improved by 0.572288
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.588
ELB improved by 0.550851
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.04
ELB improved by 0.548001
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.475
ELB improved by 0.564286
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.872
ELB improved by 0.603014
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.206
ELB improved by 0.665907
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.462
ELB improved by 0.744824
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.64
ELB improved by 0.821978
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.75
ELB improved by 0.890169
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.789
ELB improved by 0.960036
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.745
ELB improved by 1.04412
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.597
ELB improved by 1.14864
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.324
ELB improved by 1.27256
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.918
ELB improved by 1.40589
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.391
ELB improved by 1.52747
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.79
ELB improved by 1.60123
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.213
ELB improved by 1.57646
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.79
ELB improved by 1.42305
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.611
ELB improved by 1.17933
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.686
ELB improved by 0.925131
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.956
ELB improved by 0.729769
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.315
ELB improved by 0.64079
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.639
ELB improved by 0.67556
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.87
ELB improved by 0.769132
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.108
ELB improved by 0.762417
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.501
ELB improved by 0.606866
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.087
ELB improved by 0.414197
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.822
ELB improved by 0.264884
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.655
ELB improved by 0.166885
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.549
ELB improved by 0.106435
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.479
ELB improved by 0.0698219
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.431
ELB improved by 0.0475431
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.398
ELB improved by 0.0337599
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.373
ELB improved by 0.0250299
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.353
ELB improved by 0.0193425
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.338
ELB improved by 0.0155184
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.325
ELB improved by 0.0128585
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.314
ELB improved by 0.0109435
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.304
ELB improved by 0.00951771
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.794
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.507
ELB improved by 268.287
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.963
ELB improved by 60.5433
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.041
ELB improved by 39.9226
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.323
ELB improved by 18.7176
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.105
ELB improved by 9.21868
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.784
ELB improved by 6.32017
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.969
ELB improved by 5.81494
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.005
ELB improved by 5.96466
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.997
ELB improved by 6.00729
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.474
ELB improved by 5.5237
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.93
ELB improved by 4.54338
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.497
ELB improved by 3.43305
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.996
ELB improved by 2.50111
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.173
ELB improved by 1.82344
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.844
ELB improved by 1.32923
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.878
ELB improved by 0.965583
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.166
ELB improved by 0.71195
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.625
ELB improved by 0.541245
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.2
ELB improved by 0.425226
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.856
ELB improved by 0.343566
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.572
ELB improved by 0.283802
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.334
ELB improved by 0.238593
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.13
ELB improved by 0.203519
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.954
ELB improved by 0.175785
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.801
ELB improved by 0.153533
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.665
ELB improved by 0.135466
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.545
ELB improved by 0.120656
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.436
ELB improved by 0.108414
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.338
ELB improved by 0.0982253
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.248
ELB improved by 0.0896976
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.166
ELB improved by 0.0825289
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.089
ELB improved by 0.0764849
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.018
ELB improved by 0.0713823
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.951
ELB improved by 0.0670768
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.887
ELB improved by 0.0634544
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.827
ELB improved by 0.0604246
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.769
ELB improved by 0.0579158
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.713
ELB improved by 0.0558715
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.659
ELB improved by 0.0542475
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.606
ELB improved by 0.0530102
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.554
ELB improved by 0.0521344
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.502
ELB improved by 0.0516021
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.451
ELB improved by 0.0514015
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.399
ELB improved by 0.0515247
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.347
ELB improved by 0.0519665
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.295
ELB improved by 0.0527213
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.241
ELB improved by 0.0537801
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.186
ELB improved by 0.0551258
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.129
ELB improved by 0.0567296
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.07
ELB improved by 0.0585471
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.01
ELB improved by 0.0605192
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.947
ELB improved by 0.062576
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.883
ELB improved by 0.0646474
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.816
ELB improved by 0.0666768
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.747
ELB improved by 0.0686342
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.677
ELB improved by 0.0705234
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.604
ELB improved by 0.0723817
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.53
ELB improved by 0.0742725
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.454
ELB improved by 0.0762763
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.375
ELB improved by 0.0784817
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.294
ELB improved by 0.0809801
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.211
ELB improved by 0.0838625
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.123
ELB improved by 0.087217
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.032
ELB improved by 0.0911246
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.937
ELB improved by 0.0956507
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.836
ELB improved by 0.100831
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.729
ELB improved by 0.106655
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.616
ELB improved by 0.113039
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.496
ELB improved by 0.11982
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.369
ELB improved by 0.126738
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.236
ELB improved by 0.133439
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.097
ELB improved by 0.139464
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.952
ELB improved by 0.144249
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.805
ELB improved by 0.147155
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.658
ELB improved by 0.147573
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.512
ELB improved by 0.145105
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.373
ELB improved by 0.139727
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.241
ELB improved by 0.13183
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.119
ELB improved by 0.122101
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.008
ELB improved by 0.111321
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.907
ELB improved by 0.100192
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.818
ELB improved by 0.0892557
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.739
ELB improved by 0.0788856
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.67
ELB improved by 0.0693107
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.609
ELB improved by 0.0606508
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.556
ELB improved by 0.0529465
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.51
ELB improved by 0.0461812
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.47
ELB improved by 0.0403007
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.435
ELB improved by 0.0352268
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.404
ELB improved by 0.0308715
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.377
ELB improved by 0.027147
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.353
ELB improved by 0.0239749
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.331
ELB improved by 0.0212924
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.312
ELB improved by 0.0190566
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.295
ELB improved by 0.0172475
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.279
ELB improved by 0.0158726
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.264
ELB improved by 0.0149749
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.249
ELB improved by 0.0146497
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.234
ELB improved by 0.015076
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.218
ELB improved by 0.0165707
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.198
ELB improved by 0.0196692
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.173
ELB improved by 0.0252067
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.139
ELB improved by 0.0342551
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.091
ELB improved by 0.0475077
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.0636134
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.95
ELB improved by 0.0774857
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.868
ELB improved by 0.0825017
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.791
ELB improved by 0.0767427
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.726
ELB improved by 0.0645557
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.675
ELB improved by 0.0514607
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.634
ELB improved by 0.0404706
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.602
ELB improved by 0.0322768
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.576
ELB improved by 0.0265246
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.553
ELB improved by 0.0226252
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.533
ELB improved by 0.020075
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.514
ELB improved by 0.0185302
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.497
ELB improved by 0.0177902
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.479
ELB improved by 0.0177549
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.46
ELB improved by 0.0183734
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.441
ELB improved by 0.0195809
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.42
ELB improved by 0.0212102
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.397
ELB improved by 0.0228976
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.373
ELB improved by 0.0240558
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.349
ELB improved by 0.0240381
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.326
ELB improved by 0.0224965
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.306
ELB improved by 0.0196644
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.29
ELB improved by 0.0162404
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.277
ELB improved by 0.0129624
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.267
ELB improved by 0.0102739
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.259
ELB improved by 0.00828293
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.562
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.593
ELB improved by 302.969
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.103
ELB improved by 62.4902
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.963
ELB improved by 35.1396
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.089
ELB improved by 13.8748
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.378
ELB improved by 5.7111
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.102
ELB improved by 3.27556
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.836
ELB improved by 2.26605
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.045
ELB improved by 1.79082
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.494
ELB improved by 1.55112
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.076
ELB improved by 1.4179
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.739
ELB improved by 1.33719
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.454
ELB improved by 1.28529
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.203
ELB improved by 1.25059
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.978
ELB improved by 1.22508
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.778
ELB improved by 1.20008
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.613
ELB improved by 1.16455
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.507
ELB improved by 1.10616
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.491
ELB improved by 1.01591
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.597
ELB improved by 0.894602
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.842
ELB improved by 0.75505
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.226
ELB improved by 0.616185
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.732
ELB improved by 0.493761
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.336
ELB improved by 0.395558
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.014
ELB improved by 0.322318
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.743
ELB improved by 0.270874
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.506
ELB improved by 0.2368
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.29
ELB improved by 0.215917
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.085
ELB improved by 0.20487
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.884
ELB improved by 0.201207
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.681
ELB improved by 0.203241
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.471
ELB improved by 0.209871
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.251
ELB improved by 0.220412
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.016
ELB improved by 0.234462
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.764
ELB improved by 0.251811
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 0.272382
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.196
ELB improved by 0.296208
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.872
ELB improved by 0.323457
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.518
ELB improved by 0.354509
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.128
ELB improved by 0.390123
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.696
ELB improved by 0.431757
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.214
ELB improved by 0.482135
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.668
ELB improved by 0.546142
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.036
ELB improved by 0.631345
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.292
ELB improved by 0.744143
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.417
ELB improved by 0.875262
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.422
ELB improved by 0.995243
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.327
ELB improved by 1.0952
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.126
ELB improved by 1.2002
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.787
ELB improved by 1.33939
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.23
ELB improved by 1.55704
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.416
ELB improved by 1.81352
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.612
ELB improved by 1.80465
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.098
ELB improved by 1.51325
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.991
ELB improved by 1.10716
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.284
ELB improved by 0.707287
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.873
ELB improved by 0.410605
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.637
ELB improved by 0.236319
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.492
ELB improved by 0.144654
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.396
ELB improved by 0.0967431
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.325
ELB improved by 0.070513
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.27
ELB improved by 0.0551637
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.224
ELB improved by 0.0455076
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.186
ELB improved by 0.0389521
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.151
ELB improved by 0.0341165
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.121
ELB improved by 0.0302293
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.094
ELB improved by 0.0268663
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.0238255
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.049
ELB improved by 0.021045
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.031
ELB improved by 0.0185349
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.015
ELB improved by 0.016323
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394
ELB improved by 0.0144224
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.987
ELB improved by 0.0128213
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.976
ELB improved by 0.011488
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.965
ELB improved by 0.0103814
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.956
ELB improved by 0.0094594
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.944 0.316 3.447
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.083 | 0.017 | 0.103 | |
| getPIPs | 0.077 | 0.014 | 0.092 | |
| graper | 0.129 | 0.020 | 0.155 | |
| makeExampleData | 0.032 | 0.005 | 0.036 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.001 | 0.015 | |
| plotELBO | 0.390 | 0.019 | 0.414 | |
| plotGroupPenalties | 1.377 | 0.055 | 1.481 | |
| plotPosterior | 0.720 | 0.057 | 0.796 | |
| predict.graper | 2.241 | 0.078 | 2.448 | |
| print.graper | 0.079 | 0.012 | 0.100 | |