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This page was generated on 2025-10-13 11:40 -0400 (Mon, 13 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4833
merida1macOS 12.7.5 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4614
kjohnson1macOS 13.6.6 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4555
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4586
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 915/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.24.2  (landing page)
Britta Velten
Snapshot Date: 2025-10-09 13:40 -0400 (Thu, 09 Oct 2025)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_21
git_last_commit: fb5f237
git_last_commit_date: 2025-06-24 03:18:49 -0400 (Tue, 24 Jun 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


CHECK results for graper on kjohnson1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.24.2
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz
StartedAt: 2025-10-11 00:43:18 -0400 (Sat, 11 Oct 2025)
EndedAt: 2025-10-11 00:44:42 -0400 (Sat, 11 Oct 2025)
EllapsedTime: 84.3 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-06-14 r88325)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.5
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.24.2’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.863
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.705
ELB improved by 304.159

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.477
ELB improved by 58.2279

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.904
ELB improved by 29.5731

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.382
ELB improved by 10.5213

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.969
ELB improved by 4.41341

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.09
ELB improved by 2.87858

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.706
ELB improved by 2.38387

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.538
ELB improved by 2.1686

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.48
ELB improved by 2.05785

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.49
ELB improved by 1.98985

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.557
ELB improved by 1.93283

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.706
ELB improved by 1.85152

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.997
ELB improved by 1.70916

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.503
ELB improved by 1.49387

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.266
ELB improved by 1.23635

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.278
ELB improved by 0.988744

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.492
ELB improved by 0.785975

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.857
ELB improved by 0.634557

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.527747

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.872
ELB improved by 0.457345

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.456
ELB improved by 0.416226

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.057
ELB improved by 0.39849

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.658
ELB improved by 0.399361

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.243
ELB improved by 0.41512

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.8
ELB improved by 0.44308

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.318
ELB improved by 0.481562

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.788
ELB improved by 0.530073

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.198
ELB improved by 0.590051

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.532
ELB improved by 0.666441

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.763
ELB improved by 0.769029

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.855
ELB improved by 0.907827

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.777
ELB improved by 1.07757

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.513
ELB improved by 1.26385

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.027
ELB improved by 1.48677

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.238
ELB improved by 1.78856

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.056
ELB improved by 2.18247

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.455
ELB improved by 2.60026

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.604
ELB improved by 2.85173

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.863
ELB improved by 2.74073

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.556
ELB improved by 2.30651

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.724
ELB improved by 1.83247

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.246
ELB improved by 1.47748

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.116
ELB improved by 1.1302

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.31
ELB improved by 0.806555

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.741
ELB improved by 0.568542

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.307
ELB improved by 0.434148

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.926
ELB improved by 0.380682

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.569
ELB improved by 0.357365

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.252
ELB improved by 0.316543

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.979
ELB improved by 0.27359

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.719
ELB improved by 0.260165

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.475
ELB improved by 0.243463

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.291
ELB improved by 0.184342

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.173
ELB improved by 0.118044

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.096
ELB improved by 0.0768194

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.041
ELB improved by 0.0554117

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.997
ELB improved by 0.0435568

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.961
ELB improved by 0.0359895

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.93
ELB improved by 0.0305449

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.904
ELB improved by 0.0263258

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.881
ELB improved by 0.0229193

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.861
ELB improved by 0.0201062

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.843
ELB improved by 0.0177522

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.828
ELB improved by 0.015766

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.814
ELB improved by 0.0140802

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.801
ELB improved by 0.0126428

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.789
ELB improved by 0.0114124

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.779
ELB improved by 0.0103553

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.77
ELB improved by 0.00944413

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.186
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.213
ELB improved by 297.973

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.551
ELB improved by 59.6618

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.804
ELB improved by 36.7467

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.467
ELB improved by 16.337

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.158
ELB improved by 7.30891

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.424
ELB improved by 4.73443

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.244
ELB improved by 4.17936

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.041
ELB improved by 4.20368

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.623
ELB improved by 4.41726

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.044
ELB improved by 4.57978

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.629
ELB improved by 4.41488

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.844
ELB improved by 3.78524

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.922
ELB improved by 2.92115

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.746
ELB improved by 2.17623

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.103
ELB improved by 1.64339

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.838
ELB improved by 1.265

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.837
ELB improved by 1.00075

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.02
ELB improved by 0.816691

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.327
ELB improved by 0.693097

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.711
ELB improved by 0.616384

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.139
ELB improved by 0.572288

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.588
ELB improved by 0.550851

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.04
ELB improved by 0.548001

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.475
ELB improved by 0.564286

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.872
ELB improved by 0.603014

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.206
ELB improved by 0.665907

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.462
ELB improved by 0.744824

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.64
ELB improved by 0.821978

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.75
ELB improved by 0.890169

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.789
ELB improved by 0.960036

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.745
ELB improved by 1.04412

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.597
ELB improved by 1.14864

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.324
ELB improved by 1.27256

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.918
ELB improved by 1.40589

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.391
ELB improved by 1.52747

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.79
ELB improved by 1.60123

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.213
ELB improved by 1.57646

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.79
ELB improved by 1.42305

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.611
ELB improved by 1.17933

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.686
ELB improved by 0.925131

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.956
ELB improved by 0.729769

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.315
ELB improved by 0.64079

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.639
ELB improved by 0.67556

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.87
ELB improved by 0.769132

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.108
ELB improved by 0.762417

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.501
ELB improved by 0.606866

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.087
ELB improved by 0.414197

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.822
ELB improved by 0.264884

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.655
ELB improved by 0.166885

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.549
ELB improved by 0.106435

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.479
ELB improved by 0.0698219

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.431
ELB improved by 0.0475431

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.398
ELB improved by 0.0337599

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.373
ELB improved by 0.0250299

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.353
ELB improved by 0.0193425

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.338
ELB improved by 0.0155184

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.325
ELB improved by 0.0128585

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.314
ELB improved by 0.0109435

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.304
ELB improved by 0.00951771

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.794
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.507
ELB improved by 268.287

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.963
ELB improved by 60.5433

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.041
ELB improved by 39.9226

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.323
ELB improved by 18.7176

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.105
ELB improved by 9.21868

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.784
ELB improved by 6.32017

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.969
ELB improved by 5.81494

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.005
ELB improved by 5.96466

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.997
ELB improved by 6.00729

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.474
ELB improved by 5.5237

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.93
ELB improved by 4.54338

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.497
ELB improved by 3.43305

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.996
ELB improved by 2.50111

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.173
ELB improved by 1.82344

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.844
ELB improved by 1.32923

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.878
ELB improved by 0.965583

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.166
ELB improved by 0.71195

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.625
ELB improved by 0.541245

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.2
ELB improved by 0.425226

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.856
ELB improved by 0.343566

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.572
ELB improved by 0.283802

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.334
ELB improved by 0.238593

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.13
ELB improved by 0.203519

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.954
ELB improved by 0.175785

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.801
ELB improved by 0.153533

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.665
ELB improved by 0.135466

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.545
ELB improved by 0.120656

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.436
ELB improved by 0.108414

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.338
ELB improved by 0.0982253

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.248
ELB improved by 0.0896976

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.166
ELB improved by 0.0825289

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.089
ELB improved by 0.0764849

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.018
ELB improved by 0.0713823

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.951
ELB improved by 0.0670768

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.887
ELB improved by 0.0634544

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.827
ELB improved by 0.0604246

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.769
ELB improved by 0.0579158

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.713
ELB improved by 0.0558715

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.659
ELB improved by 0.0542475

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.606
ELB improved by 0.0530102

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.554
ELB improved by 0.0521344

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.502
ELB improved by 0.0516021

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.451
ELB improved by 0.0514015

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.399
ELB improved by 0.0515247

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.347
ELB improved by 0.0519665

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.295
ELB improved by 0.0527213

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.241
ELB improved by 0.0537801

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.186
ELB improved by 0.0551258

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.129
ELB improved by 0.0567296

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.07
ELB improved by 0.0585471

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.01
ELB improved by 0.0605192

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.947
ELB improved by 0.062576

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.883
ELB improved by 0.0646474

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.816
ELB improved by 0.0666768

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.747
ELB improved by 0.0686342

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.677
ELB improved by 0.0705234

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.604
ELB improved by 0.0723817

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.53
ELB improved by 0.0742725

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.454
ELB improved by 0.0762763

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.375
ELB improved by 0.0784817

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.294
ELB improved by 0.0809801

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.211
ELB improved by 0.0838625

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.123
ELB improved by 0.087217

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.032
ELB improved by 0.0911246

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.937
ELB improved by 0.0956507

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.836
ELB improved by 0.100831

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.729
ELB improved by 0.106655

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.616
ELB improved by 0.113039

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.496
ELB improved by 0.11982

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.369
ELB improved by 0.126738

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.236
ELB improved by 0.133439

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.097
ELB improved by 0.139464

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.952
ELB improved by 0.144249

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.805
ELB improved by 0.147155

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.658
ELB improved by 0.147573

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.512
ELB improved by 0.145105

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.373
ELB improved by 0.139727

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.241
ELB improved by 0.13183

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.119
ELB improved by 0.122101

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.008
ELB improved by 0.111321

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.907
ELB improved by 0.100192

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.818
ELB improved by 0.0892557

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.739
ELB improved by 0.0788856

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.67
ELB improved by 0.0693107

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.609
ELB improved by 0.0606508

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.556
ELB improved by 0.0529465

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.51
ELB improved by 0.0461812

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.47
ELB improved by 0.0403007

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.435
ELB improved by 0.0352268

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.404
ELB improved by 0.0308715

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.377
ELB improved by 0.027147

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.353
ELB improved by 0.0239749

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.331
ELB improved by 0.0212924

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.312
ELB improved by 0.0190566

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.295
ELB improved by 0.0172475

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.279
ELB improved by 0.0158726

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.264
ELB improved by 0.0149749

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.249
ELB improved by 0.0146497

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.234
ELB improved by 0.015076

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.218
ELB improved by 0.0165707

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.198
ELB improved by 0.0196692

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.173
ELB improved by 0.0252067

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.139
ELB improved by 0.0342551

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.091
ELB improved by 0.0475077

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.0636134

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.95
ELB improved by 0.0774857

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.868
ELB improved by 0.0825017

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.791
ELB improved by 0.0767427

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.726
ELB improved by 0.0645557

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.675
ELB improved by 0.0514607

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.634
ELB improved by 0.0404706

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.602
ELB improved by 0.0322768

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.576
ELB improved by 0.0265246

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.553
ELB improved by 0.0226252

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.533
ELB improved by 0.020075

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.514
ELB improved by 0.0185302

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.497
ELB improved by 0.0177902

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.479
ELB improved by 0.0177549

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.46
ELB improved by 0.0183734

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.441
ELB improved by 0.0195809

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.42
ELB improved by 0.0212102

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.397
ELB improved by 0.0228976

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.373
ELB improved by 0.0240558

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.349
ELB improved by 0.0240381

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.326
ELB improved by 0.0224965

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.306
ELB improved by 0.0196644

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.29
ELB improved by 0.0162404

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.277
ELB improved by 0.0129624

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.267
ELB improved by 0.0102739

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.259
ELB improved by 0.00828293

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.562
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.593
ELB improved by 302.969

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.103
ELB improved by 62.4902

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.963
ELB improved by 35.1396

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.089
ELB improved by 13.8748

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.378
ELB improved by 5.7111

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.102
ELB improved by 3.27556

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.836
ELB improved by 2.26605

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.045
ELB improved by 1.79082

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.494
ELB improved by 1.55112

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.076
ELB improved by 1.4179

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.739
ELB improved by 1.33719

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.454
ELB improved by 1.28529

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.203
ELB improved by 1.25059

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.978
ELB improved by 1.22508

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.778
ELB improved by 1.20008

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.613
ELB improved by 1.16455

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.507
ELB improved by 1.10616

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.491
ELB improved by 1.01591

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.597
ELB improved by 0.894602

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.842
ELB improved by 0.75505

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.226
ELB improved by 0.616185

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.732
ELB improved by 0.493761

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.336
ELB improved by 0.395558

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.014
ELB improved by 0.322318

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.743
ELB improved by 0.270874

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.506
ELB improved by 0.2368

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.29
ELB improved by 0.215917

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.085
ELB improved by 0.20487

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.884
ELB improved by 0.201207

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.681
ELB improved by 0.203241

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.471
ELB improved by 0.209871

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.251
ELB improved by 0.220412

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.016
ELB improved by 0.234462

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.764
ELB improved by 0.251811

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 0.272382

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.196
ELB improved by 0.296208

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.872
ELB improved by 0.323457

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.518
ELB improved by 0.354509

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.128
ELB improved by 0.390123

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.696
ELB improved by 0.431757

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.214
ELB improved by 0.482135

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.668
ELB improved by 0.546142

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.036
ELB improved by 0.631345

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.292
ELB improved by 0.744143

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.417
ELB improved by 0.875262

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.422
ELB improved by 0.995243

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.327
ELB improved by 1.0952

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.126
ELB improved by 1.2002

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.787
ELB improved by 1.33939

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.23
ELB improved by 1.55704

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.416
ELB improved by 1.81352

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.612
ELB improved by 1.80465

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.098
ELB improved by 1.51325

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.991
ELB improved by 1.10716

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.284
ELB improved by 0.707287

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.873
ELB improved by 0.410605

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.637
ELB improved by 0.236319

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.492
ELB improved by 0.144654

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.396
ELB improved by 0.0967431

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.325
ELB improved by 0.070513

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.27
ELB improved by 0.0551637

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.224
ELB improved by 0.0455076

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.186
ELB improved by 0.0389521

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.151
ELB improved by 0.0341165

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.121
ELB improved by 0.0302293

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.094
ELB improved by 0.0268663

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.0238255

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.049
ELB improved by 0.021045

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.031
ELB improved by 0.0185349

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.015
ELB improved by 0.016323

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394
ELB improved by 0.0144224

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.987
ELB improved by 0.0128213

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.976
ELB improved by 0.011488

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.965
ELB improved by 0.0103814

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.956
ELB improved by 0.0094594

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.944   0.316   3.447 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0830.0170.103
getPIPs0.0770.0140.092
graper0.1290.0200.155
makeExampleData0.0320.0050.036
makeExampleDataWithUnequalGroups0.0130.0010.015
plotELBO0.3900.0190.414
plotGroupPenalties1.3770.0551.481
plotPosterior0.7200.0570.796
predict.graper2.2410.0782.448
print.graper0.0790.0120.100