Back to Multiple platform build/check report for BioC 3.16: simplified long |
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This page was generated on 2023-04-12 11:06:11 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 926/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.4.3 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.5.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.4.3 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.4.3.tar.gz |
StartedAt: 2023-04-10 20:41:45 -0400 (Mon, 10 Apr 2023) |
EndedAt: 2023-04-10 20:47:32 -0400 (Mon, 10 Apr 2023) |
EllapsedTime: 346.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.4.3.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.16-bioc/meat/HPiP.Rcheck’ * using R version 4.2.3 (2023-03-15) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.4.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed FSmethod 30.742 1.611 33.718 var_imp 30.582 1.575 32.259 corr_plot 29.698 1.546 31.805 pred_ensembel 11.782 0.782 8.410 enrichfindP 0.315 0.039 51.145 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.16-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.2.3 (2023-03-15) -- "Shortstop Beagle" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin17.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 97.456469 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.251205 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 95.355770 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.550631 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.311744 final value 93.109890 converged Fitting Repeat 1 # weights: 305 initial value 104.349143 iter 10 value 94.112907 final value 94.112903 converged Fitting Repeat 2 # weights: 305 initial value 120.391109 iter 10 value 94.112905 iter 10 value 94.112904 iter 10 value 94.112904 final value 94.112904 converged Fitting Repeat 3 # weights: 305 initial value 128.762993 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 100.832597 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 108.534043 iter 10 value 94.112912 final value 94.112903 converged Fitting Repeat 1 # weights: 507 initial value 95.358007 iter 10 value 94.114061 final value 94.112903 converged Fitting Repeat 2 # weights: 507 initial value 99.631434 iter 10 value 87.358032 iter 20 value 86.291480 iter 20 value 86.291480 iter 30 value 86.202195 final value 86.202176 converged Fitting Repeat 3 # weights: 507 initial value 103.999845 iter 10 value 93.540030 iter 20 value 91.779604 iter 30 value 91.745630 final value 91.745549 converged Fitting Repeat 4 # weights: 507 initial value 101.922621 iter 10 value 93.902526 iter 20 value 93.893780 final value 93.893766 converged Fitting Repeat 5 # weights: 507 initial value 98.591721 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 97.105193 iter 10 value 94.236723 iter 20 value 89.209797 iter 30 value 86.654957 iter 40 value 86.445795 iter 50 value 85.759547 iter 60 value 84.962928 iter 70 value 83.021319 iter 80 value 82.548816 iter 90 value 82.096743 iter 100 value 82.080832 final value 82.080832 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.155200 iter 10 value 93.788560 iter 20 value 90.779726 iter 30 value 87.798755 iter 40 value 84.000920 iter 50 value 83.860280 iter 60 value 83.027005 iter 70 value 82.095888 iter 80 value 82.063765 iter 90 value 82.061597 final value 82.061468 converged Fitting Repeat 3 # weights: 103 initial value 99.523697 iter 10 value 94.485110 iter 20 value 93.431166 iter 30 value 87.049123 iter 40 value 85.152877 iter 50 value 84.545164 iter 60 value 83.181633 iter 70 value 82.412193 iter 80 value 82.176424 iter 90 value 82.062869 final value 82.061468 converged Fitting Repeat 4 # weights: 103 initial value 97.450442 iter 10 value 92.731755 iter 20 value 85.503422 iter 30 value 84.474885 iter 40 value 83.970342 iter 50 value 83.215836 iter 60 value 82.120681 iter 70 value 82.083898 iter 80 value 82.076261 iter 90 value 82.063680 final value 82.055289 converged Fitting Repeat 5 # weights: 103 initial value 100.306617 iter 10 value 94.419541 iter 20 value 91.636004 iter 30 value 87.906904 iter 40 value 86.203754 iter 50 value 84.779332 iter 60 value 82.378684 iter 70 value 81.955314 iter 80 value 81.927519 iter 90 value 81.927291 final value 81.927236 converged Fitting Repeat 1 # weights: 305 initial value 106.726606 iter 10 value 91.933106 iter 20 value 88.104593 iter 30 value 86.948886 iter 40 value 83.405395 iter 50 value 82.688720 iter 60 value 82.156420 iter 70 value 81.689258 iter 80 value 81.672417 iter 90 value 81.535809 iter 100 value 81.311245 final value 81.311245 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.474936 iter 10 value 94.178068 iter 20 value 88.237015 iter 30 value 85.594794 iter 40 value 82.982230 iter 50 value 82.229949 iter 60 value 81.883555 iter 70 value 81.452183 iter 80 value 81.348963 iter 90 value 81.155649 iter 100 value 80.949324 final value 80.949324 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 118.178328 iter 10 value 94.583310 iter 20 value 94.491414 iter 30 value 92.909708 iter 40 value 89.620534 iter 50 value 88.359787 iter 60 value 85.878142 iter 70 value 83.537811 iter 80 value 82.570443 iter 90 value 81.809234 iter 100 value 81.467608 final value 81.467608 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.277679 iter 10 value 94.050445 iter 20 value 90.980562 iter 30 value 84.537999 iter 40 value 82.740568 iter 50 value 82.262829 iter 60 value 82.180275 iter 70 value 81.893676 iter 80 value 81.756021 iter 90 value 81.596550 iter 100 value 81.564435 final value 81.564435 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.760844 iter 10 value 95.597365 iter 20 value 83.661311 iter 30 value 82.567904 iter 40 value 82.384418 iter 50 value 81.744189 iter 60 value 81.336480 iter 70 value 81.158686 iter 80 value 81.135862 iter 90 value 80.982677 iter 100 value 80.900502 final value 80.900502 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 112.369116 iter 10 value 93.950591 iter 20 value 85.158540 iter 30 value 83.901638 iter 40 value 83.254299 iter 50 value 82.561772 iter 60 value 81.867975 iter 70 value 80.962692 iter 80 value 80.687276 iter 90 value 80.652758 iter 100 value 80.619684 final value 80.619684 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 116.101646 iter 10 value 95.589739 iter 20 value 92.544326 iter 30 value 88.236807 iter 40 value 84.765627 iter 50 value 82.136483 iter 60 value 81.614581 iter 70 value 81.372602 iter 80 value 81.223687 iter 90 value 81.183755 iter 100 value 81.160107 final value 81.160107 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.988588 iter 10 value 93.904643 iter 20 value 89.737738 iter 30 value 84.890982 iter 40 value 84.286150 iter 50 value 83.119004 iter 60 value 82.558809 iter 70 value 81.144817 iter 80 value 80.896877 iter 90 value 80.785751 iter 100 value 80.723601 final value 80.723601 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.722495 iter 10 value 94.612562 iter 20 value 94.022819 iter 30 value 88.844892 iter 40 value 86.082935 iter 50 value 85.820078 iter 60 value 85.440297 iter 70 value 83.872305 iter 80 value 82.259537 iter 90 value 81.612396 iter 100 value 81.410899 final value 81.410899 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.839273 iter 10 value 94.311899 iter 20 value 92.194387 iter 30 value 85.114395 iter 40 value 82.324595 iter 50 value 81.919720 iter 60 value 81.610806 iter 70 value 81.410643 iter 80 value 81.360883 iter 90 value 81.210021 iter 100 value 80.797909 final value 80.797909 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 101.206857 final value 94.485668 converged Fitting Repeat 2 # weights: 103 initial value 104.342826 iter 10 value 94.486104 iter 20 value 93.949348 iter 30 value 93.725140 iter 40 value 93.724438 final value 93.724404 converged Fitting Repeat 3 # weights: 103 initial value 98.307170 final value 94.485716 converged Fitting Repeat 4 # weights: 103 initial value 102.891424 final value 94.410924 converged Fitting Repeat 5 # weights: 103 initial value 102.682716 final value 94.485924 converged Fitting Repeat 1 # weights: 305 initial value 104.319631 iter 10 value 94.117903 iter 20 value 94.114820 iter 30 value 90.406111 iter 40 value 89.796459 iter 50 value 87.751439 iter 60 value 84.061152 iter 70 value 83.965763 iter 80 value 83.191679 iter 90 value 82.223208 iter 100 value 81.213401 final value 81.213401 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.648678 iter 10 value 94.118454 iter 20 value 93.973050 final value 93.725835 converged Fitting Repeat 3 # weights: 305 initial value 94.476733 iter 10 value 94.117796 iter 20 value 94.077113 iter 30 value 87.403343 iter 40 value 86.874290 iter 50 value 86.847621 final value 86.847614 converged Fitting Repeat 4 # weights: 305 initial value 101.952462 iter 10 value 94.118127 iter 20 value 94.114206 iter 30 value 93.195388 iter 40 value 88.923501 final value 88.915733 converged Fitting Repeat 5 # weights: 305 initial value 95.328512 iter 10 value 94.118173 iter 20 value 94.113964 iter 30 value 94.113229 final value 94.113226 converged Fitting Repeat 1 # weights: 507 initial value 110.147749 iter 10 value 94.120815 iter 20 value 94.116131 iter 30 value 84.731021 iter 40 value 83.804037 iter 50 value 82.637100 final value 82.636987 converged Fitting Repeat 2 # weights: 507 initial value 97.072908 iter 10 value 94.491828 iter 20 value 94.467948 iter 30 value 93.685701 iter 40 value 91.961029 iter 50 value 91.960070 iter 60 value 87.015047 iter 70 value 82.191571 iter 80 value 82.051702 iter 90 value 81.847838 iter 100 value 80.924705 final value 80.924705 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.275201 iter 10 value 94.130275 iter 20 value 94.100182 iter 30 value 94.098933 iter 40 value 94.026490 iter 50 value 85.794658 iter 60 value 85.585670 iter 70 value 85.283305 final value 85.233556 converged Fitting Repeat 4 # weights: 507 initial value 98.262724 iter 10 value 94.234969 iter 20 value 94.121913 iter 30 value 92.746114 iter 40 value 87.771906 iter 50 value 86.209604 iter 60 value 85.883664 iter 70 value 85.881415 iter 80 value 85.880538 final value 85.879885 converged Fitting Repeat 5 # weights: 507 initial value 97.562277 iter 10 value 94.491380 iter 20 value 94.051412 final value 93.725775 converged Fitting Repeat 1 # weights: 103 initial value 96.135113 iter 10 value 91.070769 iter 20 value 87.588654 iter 30 value 87.573106 iter 40 value 87.569784 final value 87.569773 converged Fitting Repeat 2 # weights: 103 initial value 99.590589 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.158728 final value 94.038251 converged Fitting Repeat 4 # weights: 103 initial value 109.430674 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.753988 final value 94.042012 converged Fitting Repeat 1 # weights: 305 initial value 104.058417 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 100.404395 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 99.020256 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 115.912144 final value 94.038251 converged Fitting Repeat 5 # weights: 305 initial value 98.923259 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 126.115999 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 127.133296 final value 94.038251 converged Fitting Repeat 3 # weights: 507 initial value 105.910728 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 111.997857 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 114.262983 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 96.123936 iter 10 value 93.954695 iter 20 value 89.857233 iter 30 value 87.666330 iter 40 value 87.570427 iter 50 value 86.805196 iter 60 value 86.737606 iter 70 value 86.670357 iter 80 value 84.532955 iter 90 value 84.483775 iter 100 value 84.389639 final value 84.389639 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 103.460107 iter 10 value 94.032561 iter 20 value 89.917867 iter 30 value 86.347441 iter 40 value 85.246357 iter 50 value 84.713433 iter 60 value 84.626370 iter 70 value 84.593306 final value 84.593286 converged Fitting Repeat 3 # weights: 103 initial value 96.677952 iter 10 value 94.058537 iter 20 value 94.018545 iter 30 value 87.501492 iter 40 value 86.668041 iter 50 value 85.260353 iter 60 value 85.032502 iter 70 value 84.818403 final value 84.800160 converged Fitting Repeat 4 # weights: 103 initial value 97.483547 iter 10 value 94.054814 iter 20 value 93.055974 iter 30 value 92.640077 iter 40 value 92.495755 iter 50 value 92.314935 iter 60 value 92.280469 final value 92.280397 converged Fitting Repeat 5 # weights: 103 initial value 96.645387 iter 10 value 94.046734 iter 20 value 93.275587 iter 30 value 88.522994 iter 40 value 86.267368 iter 50 value 86.174832 iter 60 value 84.132603 iter 70 value 84.049741 iter 80 value 83.845602 final value 83.845504 converged Fitting Repeat 1 # weights: 305 initial value 100.151748 iter 10 value 94.057328 iter 20 value 93.514764 iter 30 value 88.520508 iter 40 value 87.823467 iter 50 value 85.934296 iter 60 value 85.128769 iter 70 value 84.631360 iter 80 value 83.761440 iter 90 value 82.413399 iter 100 value 81.104839 final value 81.104839 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.331558 iter 10 value 94.363809 iter 20 value 87.447536 iter 30 value 87.249118 iter 40 value 85.816719 iter 50 value 84.326658 iter 60 value 83.174949 iter 70 value 81.839500 iter 80 value 81.622502 iter 90 value 81.546123 iter 100 value 81.461558 final value 81.461558 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.986336 iter 10 value 93.824265 iter 20 value 90.059029 iter 30 value 84.410168 iter 40 value 82.038689 iter 50 value 81.413098 iter 60 value 81.326611 iter 70 value 81.306421 iter 80 value 81.174891 iter 90 value 81.154264 iter 100 value 81.153091 final value 81.153091 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.796204 iter 10 value 94.034628 iter 20 value 88.078122 iter 30 value 86.356647 iter 40 value 84.055493 iter 50 value 82.951093 iter 60 value 82.290929 iter 70 value 81.580926 iter 80 value 81.391156 iter 90 value 81.220640 iter 100 value 81.110943 final value 81.110943 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.859439 iter 10 value 100.008835 iter 20 value 94.226922 iter 30 value 93.393124 iter 40 value 89.713504 iter 50 value 85.071779 iter 60 value 84.910105 iter 70 value 84.575825 iter 80 value 84.145675 iter 90 value 84.045712 iter 100 value 83.655521 final value 83.655521 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.296677 iter 10 value 95.206236 iter 20 value 90.205091 iter 30 value 83.263417 iter 40 value 82.485225 iter 50 value 81.900099 iter 60 value 81.329797 iter 70 value 81.286046 iter 80 value 81.177794 iter 90 value 81.025237 iter 100 value 80.921503 final value 80.921503 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.635786 iter 10 value 94.418200 iter 20 value 89.761568 iter 30 value 86.658461 iter 40 value 86.525033 iter 50 value 86.206244 iter 60 value 84.758520 iter 70 value 84.449595 iter 80 value 83.961026 iter 90 value 83.661333 iter 100 value 82.831319 final value 82.831319 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.002698 iter 10 value 94.804679 iter 20 value 88.365057 iter 30 value 85.473672 iter 40 value 84.848363 iter 50 value 84.097762 iter 60 value 83.986354 iter 70 value 83.778657 iter 80 value 83.077057 iter 90 value 82.305200 iter 100 value 82.169482 final value 82.169482 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.964106 iter 10 value 93.996046 iter 20 value 92.948339 iter 30 value 92.703923 iter 40 value 86.253533 iter 50 value 85.059819 iter 60 value 82.402049 iter 70 value 81.930215 iter 80 value 81.779710 iter 90 value 81.619520 iter 100 value 81.352390 final value 81.352390 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 118.194902 iter 10 value 94.067530 iter 20 value 93.138563 iter 30 value 88.061238 iter 40 value 85.030299 iter 50 value 82.608054 iter 60 value 82.069442 iter 70 value 81.965696 iter 80 value 81.949433 iter 90 value 81.908483 iter 100 value 81.887391 final value 81.887391 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.086141 final value 94.054689 converged Fitting Repeat 2 # weights: 103 initial value 100.012674 iter 10 value 94.054475 iter 20 value 94.050196 iter 30 value 93.848096 iter 40 value 87.305164 iter 50 value 86.539740 iter 60 value 86.437824 final value 86.436512 converged Fitting Repeat 3 # weights: 103 initial value 96.674565 final value 94.054375 converged Fitting Repeat 4 # weights: 103 initial value 96.603067 final value 94.054829 converged Fitting Repeat 5 # weights: 103 initial value 99.803576 final value 93.673191 converged Fitting Repeat 1 # weights: 305 initial value 104.797251 iter 10 value 94.043180 iter 20 value 94.038302 iter 30 value 89.131822 iter 40 value 84.703903 iter 50 value 84.563882 iter 60 value 84.425303 iter 70 value 84.311642 iter 80 value 84.259040 iter 90 value 84.240998 iter 100 value 83.239473 final value 83.239473 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 111.150458 iter 10 value 94.057590 iter 20 value 94.053232 iter 30 value 93.978991 iter 40 value 85.897249 iter 50 value 85.602925 iter 60 value 85.594005 final value 85.593991 converged Fitting Repeat 3 # weights: 305 initial value 127.729853 iter 10 value 94.042931 iter 20 value 94.038487 iter 30 value 94.038273 iter 40 value 93.843904 iter 50 value 86.036805 final value 86.036800 converged Fitting Repeat 4 # weights: 305 initial value 100.030577 iter 10 value 94.042534 final value 94.038301 converged Fitting Repeat 5 # weights: 305 initial value 98.755376 iter 10 value 94.056506 iter 20 value 93.997141 iter 30 value 85.490854 iter 40 value 85.373161 final value 85.373153 converged Fitting Repeat 1 # weights: 507 initial value 112.207848 iter 10 value 94.046909 iter 20 value 94.039356 iter 30 value 90.104096 iter 40 value 87.161651 iter 50 value 86.588298 iter 60 value 85.764835 iter 70 value 84.321680 iter 80 value 82.924515 iter 90 value 82.696167 iter 100 value 82.684874 final value 82.684874 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 104.880408 iter 10 value 93.988372 iter 20 value 93.860968 iter 30 value 93.855181 iter 40 value 93.786075 iter 50 value 93.777981 iter 60 value 93.775580 iter 70 value 92.923398 iter 80 value 86.220345 iter 90 value 85.211799 iter 100 value 84.043397 final value 84.043397 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 113.241491 iter 10 value 93.784099 iter 20 value 93.658145 iter 30 value 93.587756 iter 40 value 92.415505 iter 50 value 92.288246 iter 60 value 92.236631 iter 70 value 92.197042 iter 80 value 92.196469 iter 90 value 92.196401 iter 100 value 92.195759 final value 92.195759 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.906325 iter 10 value 94.063794 iter 20 value 93.995920 iter 30 value 88.961916 iter 40 value 85.728762 iter 50 value 85.440205 iter 60 value 85.435559 iter 70 value 82.918295 iter 80 value 82.878148 iter 90 value 82.482217 iter 100 value 82.420184 final value 82.420184 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.348068 iter 10 value 93.953779 iter 20 value 86.751751 iter 30 value 86.373124 iter 40 value 86.368814 iter 50 value 86.356523 iter 60 value 85.637923 final value 85.636473 converged Fitting Repeat 1 # weights: 103 initial value 97.538099 iter 10 value 90.647111 iter 20 value 87.836316 iter 30 value 87.825153 iter 40 value 87.824716 final value 87.824710 converged Fitting Repeat 2 # weights: 103 initial value 99.141536 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 104.788365 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 96.266564 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 101.202945 final value 93.783647 converged Fitting Repeat 1 # weights: 305 initial value 99.002689 iter 10 value 94.090484 iter 20 value 93.946906 final value 93.946831 converged Fitting Repeat 2 # weights: 305 initial value 107.636622 iter 10 value 94.228679 final value 94.228678 converged Fitting Repeat 3 # weights: 305 initial value 113.054869 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 112.759979 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 98.776012 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 108.368825 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 116.784811 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 115.452306 iter 10 value 92.740676 iter 20 value 91.444469 iter 30 value 91.436555 final value 91.436519 converged Fitting Repeat 4 # weights: 507 initial value 101.662253 iter 10 value 93.607289 final value 93.607287 converged Fitting Repeat 5 # weights: 507 initial value 105.751549 iter 10 value 94.264346 iter 20 value 94.204903 final value 94.204542 converged Fitting Repeat 1 # weights: 103 initial value 97.654242 iter 10 value 94.466871 iter 20 value 93.122715 iter 30 value 87.989121 iter 40 value 85.882931 iter 50 value 84.417979 iter 60 value 84.368385 final value 84.368301 converged Fitting Repeat 2 # weights: 103 initial value 99.824078 iter 10 value 94.216674 iter 20 value 85.017966 iter 30 value 84.044056 iter 40 value 83.095457 iter 50 value 81.600786 iter 60 value 81.332703 iter 70 value 81.194871 iter 80 value 81.096570 final value 81.095867 converged Fitting Repeat 3 # weights: 103 initial value 100.946151 iter 10 value 94.488570 iter 20 value 94.399845 iter 30 value 87.101762 iter 40 value 84.419473 iter 50 value 83.861574 iter 60 value 83.195704 iter 70 value 82.963432 iter 80 value 82.918466 final value 82.918420 converged Fitting Repeat 4 # weights: 103 initial value 96.290095 iter 10 value 94.422418 iter 20 value 93.630299 iter 30 value 88.398618 iter 40 value 83.219262 iter 50 value 82.885046 iter 60 value 82.617779 iter 70 value 81.521425 iter 80 value 81.302554 iter 90 value 81.138509 iter 100 value 81.096463 final value 81.096463 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 101.999008 iter 10 value 94.331034 iter 20 value 92.541912 iter 30 value 91.195270 iter 40 value 90.375153 iter 50 value 90.118120 iter 60 value 90.051548 final value 90.050868 converged Fitting Repeat 1 # weights: 305 initial value 116.007942 iter 10 value 92.892624 iter 20 value 90.836181 iter 30 value 87.431673 iter 40 value 84.414525 iter 50 value 81.531370 iter 60 value 80.179955 iter 70 value 79.736074 iter 80 value 79.640266 iter 90 value 79.282899 iter 100 value 79.103783 final value 79.103783 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.667598 iter 10 value 91.357141 iter 20 value 90.457770 iter 30 value 89.951007 iter 40 value 89.537994 iter 50 value 89.414779 iter 60 value 88.861748 iter 70 value 87.795064 iter 80 value 84.894835 iter 90 value 84.479496 iter 100 value 83.511609 final value 83.511609 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 109.610962 iter 10 value 94.111369 iter 20 value 90.458337 iter 30 value 87.585225 iter 40 value 84.207578 iter 50 value 83.087567 iter 60 value 82.801458 iter 70 value 82.439000 iter 80 value 81.972605 iter 90 value 81.833557 iter 100 value 81.820289 final value 81.820289 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.140022 iter 10 value 91.722835 iter 20 value 90.104064 iter 30 value 89.958448 iter 40 value 84.132072 iter 50 value 83.084330 iter 60 value 82.690778 iter 70 value 82.465787 iter 80 value 81.732175 iter 90 value 81.253541 iter 100 value 79.981727 final value 79.981727 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.571065 iter 10 value 91.697952 iter 20 value 87.090472 iter 30 value 86.210610 iter 40 value 84.914251 iter 50 value 83.427076 iter 60 value 82.533600 iter 70 value 81.938574 iter 80 value 81.306947 iter 90 value 81.241307 iter 100 value 81.108970 final value 81.108970 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 107.520511 iter 10 value 94.464466 iter 20 value 91.290876 iter 30 value 88.315737 iter 40 value 84.799074 iter 50 value 81.195069 iter 60 value 80.025024 iter 70 value 79.845963 iter 80 value 79.496791 iter 90 value 79.311493 iter 100 value 79.102644 final value 79.102644 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 114.713274 iter 10 value 94.369592 iter 20 value 90.454445 iter 30 value 85.325986 iter 40 value 83.814737 iter 50 value 82.712115 iter 60 value 80.984697 iter 70 value 79.926631 iter 80 value 79.388678 iter 90 value 79.267385 iter 100 value 79.001106 final value 79.001106 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.785634 iter 10 value 94.437994 iter 20 value 90.260620 iter 30 value 85.912316 iter 40 value 84.861123 iter 50 value 82.804159 iter 60 value 81.331809 iter 70 value 80.959309 iter 80 value 80.506785 iter 90 value 79.873442 iter 100 value 79.648176 final value 79.648176 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 144.315327 iter 10 value 95.157725 iter 20 value 93.483450 iter 30 value 88.151012 iter 40 value 86.080322 iter 50 value 84.873159 iter 60 value 84.031951 iter 70 value 83.957232 iter 80 value 83.307102 iter 90 value 81.661991 iter 100 value 81.112127 final value 81.112127 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 119.339500 iter 10 value 94.428591 iter 20 value 92.924106 iter 30 value 92.016884 iter 40 value 90.859891 iter 50 value 84.649468 iter 60 value 81.743521 iter 70 value 81.540398 iter 80 value 81.042629 iter 90 value 80.111915 iter 100 value 79.350400 final value 79.350400 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.943507 final value 94.485961 converged Fitting Repeat 2 # weights: 103 initial value 109.486883 iter 10 value 91.477786 iter 20 value 91.137595 iter 30 value 89.488540 iter 40 value 89.103790 iter 50 value 89.103099 final value 89.102878 converged Fitting Repeat 3 # weights: 103 initial value 100.196952 final value 94.486981 converged Fitting Repeat 4 # weights: 103 initial value 102.024271 final value 94.277010 converged Fitting Repeat 5 # weights: 103 initial value 99.526979 iter 10 value 93.785404 iter 20 value 90.978298 iter 30 value 86.464687 iter 40 value 83.450575 iter 50 value 81.380145 iter 60 value 80.655312 iter 70 value 80.579857 iter 80 value 80.579592 iter 90 value 80.579451 iter 90 value 80.579450 iter 90 value 80.579450 final value 80.579450 converged Fitting Repeat 1 # weights: 305 initial value 128.714071 iter 10 value 94.489421 iter 20 value 94.166599 iter 30 value 84.218251 iter 40 value 83.232042 iter 50 value 83.082930 iter 60 value 82.967660 iter 70 value 82.525869 iter 80 value 81.284192 iter 90 value 79.133458 iter 100 value 78.029927 final value 78.029927 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.301908 iter 10 value 94.489372 iter 20 value 94.298705 iter 30 value 94.207061 iter 40 value 94.205848 iter 50 value 93.799620 iter 60 value 85.682806 iter 70 value 85.053528 iter 80 value 85.027682 iter 90 value 85.020850 iter 100 value 85.020492 final value 85.020492 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.575635 iter 10 value 94.421681 iter 20 value 86.135619 iter 30 value 85.612270 iter 40 value 85.308058 final value 85.305743 converged Fitting Repeat 4 # weights: 305 initial value 95.500290 iter 10 value 94.486814 final value 94.275662 converged Fitting Repeat 5 # weights: 305 initial value 111.447314 iter 10 value 94.490356 iter 20 value 94.481224 iter 30 value 85.994723 iter 40 value 84.849998 iter 50 value 84.848799 iter 50 value 84.848799 final value 84.848799 converged Fitting Repeat 1 # weights: 507 initial value 96.014452 iter 10 value 91.770580 iter 20 value 89.542805 iter 30 value 89.541463 iter 40 value 89.510537 iter 50 value 88.364447 iter 60 value 88.359950 iter 70 value 87.162994 iter 80 value 87.152368 iter 90 value 87.151788 final value 87.151425 converged Fitting Repeat 2 # weights: 507 initial value 139.954000 iter 10 value 94.285902 iter 20 value 94.278777 iter 30 value 94.278042 iter 40 value 93.943347 iter 50 value 88.613180 iter 60 value 84.060915 iter 70 value 82.767525 iter 80 value 82.635781 iter 90 value 82.599446 iter 100 value 82.598837 final value 82.598837 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 96.517468 iter 10 value 94.488460 iter 20 value 93.831407 iter 30 value 89.676842 iter 40 value 89.671737 iter 50 value 83.112494 iter 60 value 81.578193 iter 70 value 79.819917 iter 80 value 79.790323 iter 90 value 79.751211 iter 100 value 79.749741 final value 79.749741 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.512008 iter 10 value 94.489084 iter 20 value 94.484241 iter 30 value 93.809168 iter 40 value 87.765412 iter 50 value 86.379826 iter 60 value 84.807128 iter 70 value 81.145596 iter 80 value 80.848228 final value 80.847858 converged Fitting Repeat 5 # weights: 507 initial value 100.131828 iter 10 value 94.283466 iter 20 value 94.278671 iter 30 value 94.277759 iter 40 value 94.277522 iter 50 value 94.250744 iter 60 value 85.439431 iter 70 value 84.833972 iter 80 value 84.819777 iter 90 value 84.322956 iter 100 value 82.386406 final value 82.386406 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.203318 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 101.340261 final value 93.688363 converged Fitting Repeat 3 # weights: 103 initial value 95.593994 final value 94.484210 converged Fitting Repeat 4 # weights: 103 initial value 95.146099 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.033274 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 106.409863 final value 94.354396 converged Fitting Repeat 2 # weights: 305 initial value 110.257420 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 102.159936 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 111.702171 iter 10 value 92.098068 iter 20 value 92.088908 final value 92.088889 converged Fitting Repeat 5 # weights: 305 initial value 96.579807 iter 10 value 94.356773 iter 20 value 94.313831 final value 94.313818 converged Fitting Repeat 1 # weights: 507 initial value 99.415206 iter 10 value 93.421730 iter 20 value 85.679419 iter 30 value 84.186842 iter 40 value 84.185890 iter 40 value 84.185890 iter 40 value 84.185889 final value 84.185889 converged Fitting Repeat 2 # weights: 507 initial value 102.652531 final value 94.354396 converged Fitting Repeat 3 # weights: 507 initial value 96.142417 final value 94.354395 converged Fitting Repeat 4 # weights: 507 initial value 95.639516 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 98.396143 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 98.081687 iter 10 value 94.488540 iter 20 value 94.097817 iter 30 value 93.746546 iter 40 value 93.362839 iter 50 value 87.340187 iter 60 value 82.713455 iter 70 value 81.410025 iter 80 value 80.649964 iter 90 value 80.346200 iter 100 value 80.224431 final value 80.224431 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.030146 iter 10 value 94.487805 iter 20 value 85.960326 iter 30 value 83.660652 iter 40 value 82.872346 iter 50 value 81.689856 iter 60 value 81.578082 final value 81.573264 converged Fitting Repeat 3 # weights: 103 initial value 100.087380 iter 10 value 94.486603 iter 20 value 88.627571 iter 30 value 85.828874 iter 40 value 85.660973 iter 50 value 85.358044 iter 60 value 85.274314 iter 70 value 85.075988 iter 80 value 84.872605 iter 90 value 84.855464 final value 84.855462 converged Fitting Repeat 4 # weights: 103 initial value 96.455636 iter 10 value 94.489473 iter 20 value 93.243298 iter 30 value 91.270564 iter 40 value 88.391060 iter 50 value 87.086280 iter 60 value 86.551573 iter 70 value 86.446571 iter 80 value 86.413048 iter 90 value 86.391384 final value 86.391364 converged Fitting Repeat 5 # weights: 103 initial value 99.780101 iter 10 value 94.077577 iter 20 value 91.804968 iter 30 value 88.034567 iter 40 value 87.252151 iter 50 value 84.819776 iter 60 value 83.728047 iter 70 value 82.972892 iter 80 value 82.315576 iter 90 value 81.774214 iter 100 value 81.589459 final value 81.589459 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 102.461585 iter 10 value 94.522429 iter 20 value 90.259940 iter 30 value 86.048318 iter 40 value 83.128768 iter 50 value 82.056877 iter 60 value 81.079156 iter 70 value 79.952245 iter 80 value 79.663715 iter 90 value 79.147492 iter 100 value 78.594128 final value 78.594128 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.790705 iter 10 value 93.055170 iter 20 value 83.581126 iter 30 value 80.918625 iter 40 value 80.142648 iter 50 value 79.521776 iter 60 value 79.272214 iter 70 value 79.079511 iter 80 value 78.695203 iter 90 value 78.577605 iter 100 value 78.568207 final value 78.568207 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.506877 iter 10 value 94.175733 iter 20 value 89.597027 iter 30 value 85.183651 iter 40 value 84.051039 iter 50 value 83.266594 iter 60 value 83.046545 iter 70 value 82.608368 iter 80 value 82.201553 iter 90 value 82.050204 iter 100 value 81.117462 final value 81.117462 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 113.231865 iter 10 value 94.713184 iter 20 value 93.856179 iter 30 value 90.218672 iter 40 value 83.732340 iter 50 value 83.585838 iter 60 value 80.988357 iter 70 value 79.560627 iter 80 value 78.585984 iter 90 value 78.380530 iter 100 value 78.270348 final value 78.270348 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 101.883628 iter 10 value 92.460268 iter 20 value 87.752959 iter 30 value 82.276612 iter 40 value 81.740411 iter 50 value 81.367995 iter 60 value 79.802798 iter 70 value 79.318234 iter 80 value 78.944563 iter 90 value 78.624396 iter 100 value 78.572510 final value 78.572510 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.114323 iter 10 value 94.901442 iter 20 value 94.219688 iter 30 value 87.080394 iter 40 value 86.741026 iter 50 value 84.833558 iter 60 value 80.478032 iter 70 value 79.960274 iter 80 value 79.601330 iter 90 value 78.865713 iter 100 value 78.376579 final value 78.376579 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.975025 iter 10 value 100.352091 iter 20 value 94.079781 iter 30 value 88.290432 iter 40 value 81.908347 iter 50 value 80.909947 iter 60 value 80.424200 iter 70 value 79.698403 iter 80 value 79.486250 iter 90 value 78.910621 iter 100 value 78.633480 final value 78.633480 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 113.671422 iter 10 value 94.004343 iter 20 value 89.774867 iter 30 value 88.152937 iter 40 value 86.055828 iter 50 value 85.071939 iter 60 value 84.498277 iter 70 value 80.934023 iter 80 value 80.230021 iter 90 value 80.018769 iter 100 value 79.899391 final value 79.899391 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.073842 iter 10 value 94.509674 iter 20 value 88.206828 iter 30 value 83.269346 iter 40 value 82.312653 iter 50 value 81.809060 iter 60 value 80.429949 iter 70 value 79.258084 iter 80 value 78.946535 iter 90 value 78.748146 iter 100 value 78.549250 final value 78.549250 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.632793 iter 10 value 93.285357 iter 20 value 84.647600 iter 30 value 83.832752 iter 40 value 82.745065 iter 50 value 82.253806 iter 60 value 81.421272 iter 70 value 80.937117 iter 80 value 80.053373 iter 90 value 79.653411 iter 100 value 79.315127 final value 79.315127 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.819126 iter 10 value 94.485990 iter 20 value 94.484227 iter 20 value 94.484226 iter 20 value 94.484226 final value 94.484226 converged Fitting Repeat 2 # weights: 103 initial value 98.046131 final value 94.485887 converged Fitting Repeat 3 # weights: 103 initial value 95.228451 final value 94.485877 converged Fitting Repeat 4 # weights: 103 initial value 95.732193 final value 94.485837 converged Fitting Repeat 5 # weights: 103 initial value 97.359964 final value 94.486337 converged Fitting Repeat 1 # weights: 305 initial value 115.804293 iter 10 value 94.489145 iter 20 value 94.484392 final value 94.484226 converged Fitting Repeat 2 # weights: 305 initial value 102.041036 iter 10 value 94.359591 iter 20 value 92.786986 iter 30 value 86.352289 iter 40 value 86.333665 iter 50 value 82.791085 iter 60 value 82.752623 iter 70 value 82.750912 final value 82.750901 converged Fitting Repeat 3 # weights: 305 initial value 98.358363 iter 10 value 94.488785 iter 20 value 94.484387 final value 94.484262 converged Fitting Repeat 4 # weights: 305 initial value 105.512754 iter 10 value 94.200818 iter 20 value 94.194420 iter 30 value 86.094593 iter 40 value 85.242270 iter 50 value 85.227676 iter 60 value 85.227242 final value 85.227177 converged Fitting Repeat 5 # weights: 305 initial value 96.248879 iter 10 value 94.500750 iter 20 value 94.495399 iter 30 value 93.671239 iter 40 value 93.635434 iter 50 value 93.631086 iter 60 value 82.214581 iter 70 value 81.347803 iter 80 value 81.262888 iter 90 value 81.123955 iter 100 value 81.115530 final value 81.115530 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.844020 iter 10 value 94.510230 iter 20 value 94.449574 iter 30 value 86.430411 iter 40 value 86.329506 iter 50 value 86.151929 iter 60 value 85.229228 iter 70 value 85.187152 iter 80 value 84.708755 iter 90 value 82.139394 iter 100 value 81.212276 final value 81.212276 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.231373 iter 10 value 94.491742 iter 20 value 94.433597 iter 30 value 82.848577 iter 40 value 82.698712 iter 50 value 82.315749 iter 60 value 80.498140 iter 70 value 79.876371 iter 80 value 79.847849 iter 90 value 79.845127 iter 100 value 79.844478 final value 79.844478 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 99.195965 iter 10 value 90.006451 iter 20 value 85.257248 iter 30 value 85.230076 iter 40 value 85.206826 iter 50 value 83.935771 iter 60 value 82.912979 iter 70 value 79.909061 iter 80 value 79.287748 iter 90 value 78.877378 iter 100 value 78.693371 final value 78.693371 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.665073 iter 10 value 94.375358 iter 20 value 91.604566 iter 30 value 91.585053 iter 40 value 91.584442 iter 50 value 91.582077 iter 60 value 91.580719 iter 70 value 91.580374 iter 80 value 91.578504 iter 90 value 91.578113 iter 100 value 91.577716 final value 91.577716 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 115.149011 iter 10 value 94.493847 iter 20 value 94.486242 iter 30 value 93.897402 iter 40 value 93.580409 iter 50 value 93.579192 iter 60 value 93.561199 iter 70 value 82.820383 iter 80 value 82.816762 iter 90 value 82.292942 final value 82.283050 converged Fitting Repeat 1 # weights: 103 initial value 97.678104 final value 93.810010 converged Fitting Repeat 2 # weights: 103 initial value 97.189874 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 97.528209 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 95.746764 final value 93.288889 converged Fitting Repeat 5 # weights: 103 initial value 102.852862 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.361071 final value 93.810010 converged Fitting Repeat 2 # weights: 305 initial value 98.388395 final value 93.915746 converged Fitting Repeat 3 # weights: 305 initial value 96.576699 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 102.588707 iter 10 value 93.615646 iter 20 value 89.873639 iter 30 value 84.104514 iter 40 value 84.078716 iter 50 value 84.075381 final value 84.075275 converged Fitting Repeat 5 # weights: 305 initial value 102.448913 iter 10 value 91.050433 iter 20 value 86.315017 final value 86.247138 converged Fitting Repeat 1 # weights: 507 initial value 110.713769 final value 93.915746 converged Fitting Repeat 2 # weights: 507 initial value 110.151033 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 105.452298 final value 93.810010 converged Fitting Repeat 4 # weights: 507 initial value 94.856865 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 108.765370 final value 93.915746 converged Fitting Repeat 1 # weights: 103 initial value 97.643548 iter 10 value 93.538787 iter 20 value 83.564181 iter 30 value 83.403976 iter 40 value 82.981321 iter 50 value 82.927906 final value 82.927902 converged Fitting Repeat 2 # weights: 103 initial value 96.903512 iter 10 value 94.104764 iter 20 value 93.453345 iter 30 value 85.007876 iter 40 value 84.251043 iter 50 value 83.759327 iter 60 value 83.694746 iter 70 value 83.408678 iter 80 value 83.376059 final value 83.376055 converged Fitting Repeat 3 # weights: 103 initial value 98.841138 iter 10 value 94.067836 iter 20 value 94.034309 iter 30 value 93.148878 iter 40 value 86.630981 iter 50 value 85.519226 iter 60 value 83.345268 iter 70 value 81.909800 iter 80 value 81.303513 iter 90 value 81.008962 iter 100 value 80.502717 final value 80.502717 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.652263 iter 10 value 88.150234 iter 20 value 83.792103 iter 30 value 83.150432 iter 40 value 83.042558 iter 50 value 82.928098 final value 82.927902 converged Fitting Repeat 5 # weights: 103 initial value 109.098020 iter 10 value 94.057580 iter 20 value 93.999979 iter 30 value 85.663654 iter 40 value 85.378745 iter 50 value 83.633864 iter 60 value 83.443313 iter 70 value 83.378665 final value 83.376055 converged Fitting Repeat 1 # weights: 305 initial value 104.030155 iter 10 value 94.038061 iter 20 value 93.577023 iter 30 value 89.512961 iter 40 value 88.051268 iter 50 value 87.062650 iter 60 value 85.841617 iter 70 value 85.485526 iter 80 value 81.593096 iter 90 value 80.552257 iter 100 value 80.299122 final value 80.299122 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.287442 iter 10 value 93.788812 iter 20 value 86.900080 iter 30 value 83.952381 iter 40 value 81.757239 iter 50 value 80.631179 iter 60 value 79.838966 iter 70 value 79.729444 iter 80 value 79.530332 iter 90 value 79.466931 iter 100 value 79.427729 final value 79.427729 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.125668 iter 10 value 94.034196 iter 20 value 92.881889 iter 30 value 88.212704 iter 40 value 86.041242 iter 50 value 84.670467 iter 60 value 83.523810 iter 70 value 83.226720 iter 80 value 82.853554 iter 90 value 81.657196 iter 100 value 80.899283 final value 80.899283 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.693112 iter 10 value 86.329053 iter 20 value 84.067889 iter 30 value 82.775135 iter 40 value 80.931661 iter 50 value 80.344630 iter 60 value 80.096269 iter 70 value 80.024465 iter 80 value 79.808450 iter 90 value 79.531122 iter 100 value 79.293332 final value 79.293332 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.581501 iter 10 value 93.063591 iter 20 value 86.466894 iter 30 value 82.487860 iter 40 value 80.380921 iter 50 value 79.616906 iter 60 value 79.107537 iter 70 value 78.946028 iter 80 value 78.846380 iter 90 value 78.808984 iter 100 value 78.803385 final value 78.803385 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 127.209051 iter 10 value 94.415993 iter 20 value 91.862664 iter 30 value 85.665716 iter 40 value 83.843173 iter 50 value 83.024811 iter 60 value 81.792777 iter 70 value 81.510914 iter 80 value 81.154087 iter 90 value 80.723697 iter 100 value 80.539751 final value 80.539751 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 103.701707 iter 10 value 93.913016 iter 20 value 93.588187 iter 30 value 92.430689 iter 40 value 87.217730 iter 50 value 81.725844 iter 60 value 81.166527 iter 70 value 80.423993 iter 80 value 80.327053 iter 90 value 80.136085 iter 100 value 79.635523 final value 79.635523 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 117.482173 iter 10 value 103.147131 iter 20 value 96.412751 iter 30 value 92.137160 iter 40 value 87.844106 iter 50 value 86.033290 iter 60 value 83.631186 iter 70 value 82.113366 iter 80 value 81.658215 iter 90 value 79.765331 iter 100 value 79.537722 final value 79.537722 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 110.482671 iter 10 value 96.759594 iter 20 value 93.690878 iter 30 value 87.330871 iter 40 value 85.687159 iter 50 value 81.424722 iter 60 value 80.248996 iter 70 value 79.433588 iter 80 value 78.886678 iter 90 value 78.809312 iter 100 value 78.784424 final value 78.784424 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 116.878868 iter 10 value 94.268055 iter 20 value 89.179424 iter 30 value 86.757582 iter 40 value 83.568319 iter 50 value 81.308579 iter 60 value 80.271629 iter 70 value 79.471036 iter 80 value 78.967800 iter 90 value 78.762148 iter 100 value 78.670339 final value 78.670339 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.584480 final value 94.054603 converged Fitting Repeat 2 # weights: 103 initial value 97.980534 final value 94.054736 converged Fitting Repeat 3 # weights: 103 initial value 97.216008 final value 94.054591 converged Fitting Repeat 4 # weights: 103 initial value 108.261969 final value 94.054699 converged Fitting Repeat 5 # weights: 103 initial value 99.492270 iter 10 value 94.054387 iter 20 value 94.052930 iter 30 value 93.356553 iter 40 value 93.316852 final value 93.315939 converged Fitting Repeat 1 # weights: 305 initial value 95.294774 iter 10 value 92.805852 iter 20 value 92.780501 iter 30 value 92.778694 iter 40 value 89.922890 iter 50 value 84.256442 iter 60 value 82.267425 iter 70 value 82.237155 iter 80 value 82.233910 iter 90 value 82.229455 iter 100 value 82.228509 final value 82.228509 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 94.953292 iter 10 value 94.058183 iter 20 value 92.780761 iter 30 value 92.568588 iter 40 value 90.642041 iter 50 value 83.922433 iter 60 value 83.915997 iter 70 value 82.118219 iter 80 value 82.115636 iter 90 value 82.106654 iter 100 value 81.629192 final value 81.629192 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 97.957500 iter 10 value 93.609443 iter 20 value 92.999957 iter 30 value 82.331205 iter 40 value 81.396376 iter 50 value 79.171594 iter 60 value 78.161035 iter 70 value 77.710370 iter 80 value 77.694231 iter 90 value 77.682279 iter 100 value 77.571747 final value 77.571747 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.052355 iter 10 value 93.945320 iter 20 value 93.300189 iter 30 value 87.416672 iter 40 value 84.367024 iter 50 value 81.783955 iter 60 value 80.998263 iter 70 value 80.052864 iter 80 value 79.885043 iter 90 value 79.862846 iter 100 value 79.861966 final value 79.861966 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.536872 iter 10 value 94.057190 iter 20 value 93.326674 iter 30 value 87.731549 iter 40 value 85.074004 iter 50 value 85.072374 iter 60 value 85.013247 iter 70 value 84.643293 iter 80 value 82.656419 iter 90 value 81.314333 iter 100 value 81.140358 final value 81.140358 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.922437 iter 10 value 93.339041 iter 20 value 93.331229 iter 30 value 93.319406 iter 40 value 93.317188 iter 50 value 89.098173 iter 60 value 85.072834 iter 70 value 84.573079 iter 80 value 83.301269 iter 90 value 83.180250 iter 100 value 83.179927 final value 83.179927 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.403370 iter 10 value 93.661150 iter 20 value 90.600503 iter 30 value 90.155991 iter 40 value 90.149609 iter 50 value 89.070246 iter 60 value 83.692727 iter 70 value 81.998872 iter 80 value 80.388349 iter 90 value 79.982102 iter 100 value 79.593271 final value 79.593271 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.518288 iter 10 value 94.059375 iter 20 value 93.697868 iter 30 value 86.685092 iter 40 value 86.621931 iter 50 value 86.620969 iter 60 value 86.620064 iter 70 value 86.173168 iter 80 value 81.166377 iter 90 value 79.871273 iter 100 value 78.460513 final value 78.460513 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.292952 iter 10 value 92.765998 iter 20 value 92.594758 iter 30 value 86.201337 iter 40 value 85.646632 iter 50 value 85.549451 iter 60 value 85.188103 iter 70 value 85.185752 iter 80 value 85.143374 iter 90 value 85.140763 iter 100 value 85.140509 final value 85.140509 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.313834 iter 10 value 89.229954 iter 20 value 85.293122 iter 30 value 85.291677 iter 40 value 85.176844 iter 50 value 85.161566 iter 60 value 85.161155 iter 70 value 85.158377 final value 85.158314 converged Fitting Repeat 1 # weights: 305 initial value 131.485618 iter 10 value 117.708036 iter 20 value 108.123259 iter 30 value 104.699262 iter 40 value 103.837411 iter 50 value 103.152516 iter 60 value 102.636573 iter 70 value 102.253626 iter 80 value 101.804803 iter 90 value 101.457671 iter 100 value 101.400407 final value 101.400407 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 135.650206 iter 10 value 116.351420 iter 20 value 108.032955 iter 30 value 107.298395 iter 40 value 106.783176 iter 50 value 103.404730 iter 60 value 101.910094 iter 70 value 101.751212 iter 80 value 101.461723 iter 90 value 101.248490 iter 100 value 100.978609 final value 100.978609 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 148.116760 iter 10 value 117.793012 iter 20 value 115.965491 iter 30 value 115.476707 iter 40 value 112.273207 iter 50 value 109.226299 iter 60 value 107.392718 iter 70 value 106.652895 iter 80 value 104.129479 iter 90 value 102.040478 iter 100 value 101.083638 final value 101.083638 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 137.642882 iter 10 value 117.863092 iter 20 value 109.468081 iter 30 value 108.661063 iter 40 value 108.370734 iter 50 value 107.242980 iter 60 value 105.375647 iter 70 value 105.038120 iter 80 value 104.943073 iter 90 value 103.489930 iter 100 value 102.076846 final value 102.076846 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 131.693624 iter 10 value 117.690961 iter 20 value 108.564841 iter 30 value 107.729320 iter 40 value 105.746763 iter 50 value 105.346342 iter 60 value 105.029100 iter 70 value 105.012552 iter 80 value 104.985547 iter 90 value 104.947813 iter 100 value 103.994881 final value 103.994881 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Mon Apr 10 20:47:22 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 36.481 1.625 83.391
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 30.742 | 1.611 | 33.718 | |
FreqInteractors | 0.304 | 0.015 | 0.461 | |
calculateAAC | 0.053 | 0.008 | 0.091 | |
calculateAutocor | 0.286 | 0.055 | 0.344 | |
calculateCTDC | 0.076 | 0.004 | 0.081 | |
calculateCTDD | 0.547 | 0.041 | 0.592 | |
calculateCTDT | 0.222 | 0.022 | 0.244 | |
calculateCTriad | 0.346 | 0.025 | 0.372 | |
calculateDC | 0.077 | 0.011 | 0.088 | |
calculateF | 0.271 | 0.023 | 0.294 | |
calculateKSAAP | 0.085 | 0.010 | 0.095 | |
calculateQD_Sm | 1.703 | 0.129 | 2.023 | |
calculateTC | 1.661 | 0.176 | 1.845 | |
calculateTC_Sm | 0.22 | 0.01 | 0.23 | |
corr_plot | 29.698 | 1.546 | 31.805 | |
enrichfindP | 0.315 | 0.039 | 51.145 | |
enrichfind_hp | 0.026 | 0.006 | 3.439 | |
enrichplot | 0.222 | 0.015 | 0.238 | |
filter_missing_values | 0.001 | 0.000 | 0.001 | |
getFASTA | 0.081 | 0.014 | 4.433 | |
getHPI | 0.000 | 0.001 | 0.001 | |
get_negativePPI | 0.001 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.001 | 0.002 | |
plotPPI | 0.066 | 0.003 | 0.068 | |
pred_ensembel | 11.782 | 0.782 | 8.410 | |
var_imp | 30.582 | 1.575 | 32.259 | |