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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
Package 84/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
GeneSpring2.11.0Thon de BoerLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | [ OK ] | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | skipped |
Package: GeneSpring |
Version: 2.11.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check GeneSpring_2.11.0.tar.gz |
RetCode: 0 |
Time: 70.5 seconds |
Status: OK |
CheckDir: GeneSpring.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/GeneSpring.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-06-03 r41797) * checking for file 'GeneSpring/DESCRIPTION' ... OK * this is package 'GeneSpring' version '2.11.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'GeneSpring' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating GeneSpring-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating GeneSpring-manual.tex ... OK * checking GeneSpring-manual.tex ... OK
GeneSpring.Rcheck/00install.out:
* Installing *source* package 'GeneSpring' ... ** R ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. ** help Note: unmatched right brace in 'GSload.exp' on or after line 76 >>> Building/Updating help pages for package 'GeneSpring' Formats: text html latex example GSint text html latex example GSint2BC text html latex example GSload.exp text html latex example GSload.genelist text html latex example GSload.int text html latex example GSsave.exp text html latex example ** building package indices ... * DONE (GeneSpring)