GO.db
A set of annotation maps describing the entire Gene Ontology
Bioconductor version: 2.7
A set of annotation maps describing the entire Gene Ontology assembled using data from GO
Author: Marc Carlson, Seth Falcon, Herve Pages, Nianhua Li
Maintainer: Biocore Data Team <biocannotation at lists.fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GO.db")
To cite this package in a publication, start R and enter:
citation("GO.db")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, FunctionalAnnotation |
| Depends | R (>= 2.7.0), methods, AnnotationDbi(>= 1.11.8) |
| Imports | methods, AnnotationDbi |
| Suggests | |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | affycoretools, annaffy, ChIPpeakAnno, davidTiling, goProfiles, GOSemSim, goTools, ontoTools, ScISI, topGO |
| Imports Me | adSplit, ChIPpeakAnno, ExpressionView, GOstats, PCpheno, safe, ScISI, SLGI |
| Suggests Me | Agi4x44PreProcess, annotate, AnnotationDbi, BiocCaseStudies, Category, cellHTS, eisa, ExpressionView, gage, GeneAnswers, GlobalAncova, globaltest, goseq, GOstats, GSEABase, HTSanalyzeR, PCpheno, PGSEA, safe, SLGI, yeastExpData |
| Version | 2.4.5 |
Package Downloads
| Package Source | GO.db_2.4.5.tar.gz |
| Windows Binary | GO.db_2.4.5.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | GO.db_2.4.5.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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