GeneAnswers

Integrated Interpretation of Genes

Bioconductor version: 2.7

GeneAnswers provide an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.

Author: Gang Feng, Pan Du, Tian Xia, Warren Kibbe and Simon Lin

Maintainer: Gang Feng <g-feng at northwestern.edu> and Pan Du <dupan at northwestern.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GeneAnswers")

To cite this package in a publication, start R and enter:

    citation("GeneAnswers")

Documentation

PDF	R Script	Summarize gene annotations based on collective ontology annotations
PDF	R Script	GeneAnswers
PDF		Reference Manual

Details

biocViews	Infrastructure, DataRepresentation, Visualization, GraphsAndNetworks
Depends	R (>= 2.10.0), igraph, RCurl, annotate, Biobase(>= 1.12.0), methods, XML, RSQLite, MASS, rgl, Heatplus, RColorBrewer
Imports	graph, Rgraphviz, RBGL, annotate
Suggests	GO.db, KEGG.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db
System Requirements
License	LGPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version	1.6.0
Since	Bioconductor 2.5 (R-2.10)

Package Downloads

Package Source	GeneAnswers_1.6.0.tar.gz
Windows Binary	GeneAnswers_1.6.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	GeneAnswers_1.6.0.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center