Back to Books build report for BioC 3.22

This page was generated on 2025-10-24 14:30 -0400 (Fri, 24 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4898
lconwaymacOS 12.7.6 Montereyx86_644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4688
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4634
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 5/11HostnameOS / ArchINSTALLBUILDCHECK
OSCA.advanced 1.17.3  (landing page)
Ludwig Geistlinger
Snapshot Date: 2025-10-24 06:30 -0400 (Fri, 24 Oct 2025)
git_url: https://git.bioconductor.org/packages/OSCA.advanced
git_branch: devel
git_last_commit: 5e6af59
git_last_commit_date: 2025-10-22 23:34:55 -0400 (Wed, 22 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'PCAtools' which is not available
lconwaymacOS 12.7.6 Monterey / x86_64  OK    OK    OK  
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skipped

CHECK results for OSCA.advanced on lconway

To the developers/maintainers of the OSCA.advanced package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OSCA.advanced
Version: 1.17.3
Command: rm -rf OSCA.advanced.book && mkdir OSCA.advanced.book && /Users/biocbuild/BBS/utils/deploy_book.py OSCA.advanced_1.17.3.tar.gz OSCA.advanced.book
StartedAt: 2025-10-24 08:17:59 -0400 (Fri, 24 Oct 2025)
EndedAt: 2025-10-24 08:18:01 -0400 (Fri, 24 Oct 2025)
EllapsedTime: 1.3 seconds
RetCode: 0
Status:   OK  
DeployDestDir: OSCA.advanced.book
Warnings: 0

Command output

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### Running command:
###
###   rm -rf OSCA.advanced.book && mkdir OSCA.advanced.book && /Users/biocbuild/BBS/utils/deploy_book.py OSCA.advanced_1.17.3.tar.gz OSCA.advanced.book
###
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Deploying content from book tarball 'OSCA.advanced_1.17.3.tar.gz' to 'OSCA.advanced.book/OSCA.advanced/' ... OK