Johannes Rainer
| Snapshot Date: 2025-07-31 13:25 -0400 (Thu, 31 Jul 2025) |
| git_url: https://git.bioconductor.org/packages/SpectriPy |
| git_branch: devel |
| git_last_commit: 99baf1c |
| git_last_commit_date: 2025-07-16 07:09:00 -0400 (Wed, 16 Jul 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-01 12:09 -0400 (Fri, 01 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4796 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4534 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4578 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4519 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4517 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2050/2313 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SpectriPy 0.99.8 (landing page) Johannes Rainer
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | TIMEOUT | OK | ERROR | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the SpectriPy package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpectriPy.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: SpectriPy |
| Version: 0.99.8 |
| Command: rm -rf SpectriPy.buildbin-libdir && mkdir SpectriPy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SpectriPy_0.99.8.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SpectriPy.buildbin-libdir |
| StartedAt: 2025-08-01 01:49:52 -0400 (Fri, 01 Aug 2025) |
| EndedAt: 2025-08-01 01:50:49 -0400 (Fri, 01 Aug 2025) |
| EllapsedTime: 56.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: SpectriPy_0.99.8.tgz |
| PackageFileSize: 1.027 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf SpectriPy.buildbin-libdir && mkdir SpectriPy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SpectriPy_0.99.8.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SpectriPy.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=SpectriPy.buildbin-libdir SpectriPy_0.99.8.tar.gz' >>>>>>> * installing *source* package ‘SpectriPy’ ... ** this is package ‘SpectriPy’ version ‘0.99.8’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/lib/python3.12/site-packages/numba/cpython/old_hashing.py:477: UserWarning: FNV hashing is not implemented in Numba. See PEP 456 https://www.python.org/dev/peps/pep-0456/ for rationale over not using FNV. Numba will continue to work, but hashes for built in types will be computed using siphash24. This will permit e.g. dictionaries to continue to behave as expected, however anything relying on the value of the hash opposed to hash as a derived property is likely to not work as expected. warnings.warn(msg) python: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/bin/python3 libpython: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/python/cpython-3.12.9-macos-x86_64-none/lib/libpython3.12.dylib pythonhome: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1:/Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1 virtualenv: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/bin/activate_this.py version: 3.12.9 (main, Feb 12 2025, 15:27:18) [Clang 19.1.6 ] numpy: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/lib/python3.12/site-packages/numpy numpy_version: 2.2.6 NOTE: Python version was forced by py_require() ** testing if installed package can be loaded from final location /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/lib/python3.12/site-packages/numba/cpython/old_hashing.py:477: UserWarning: FNV hashing is not implemented in Numba. See PEP 456 https://www.python.org/dev/peps/pep-0456/ for rationale over not using FNV. Numba will continue to work, but hashes for built in types will be computed using siphash24. This will permit e.g. dictionaries to continue to behave as expected, however anything relying on the value of the hash opposed to hash as a derived property is likely to not work as expected. warnings.warn(msg) python: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/bin/python3 libpython: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/python/cpython-3.12.9-macos-x86_64-none/lib/libpython3.12.dylib pythonhome: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1:/Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1 virtualenv: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/bin/activate_this.py version: 3.12.9 (main, Feb 12 2025, 15:27:18) [Clang 19.1.6 ] numpy: /Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/1mwD4afNTtukKvXck4ds1/lib/python3.12/site-packages/numpy numpy_version: 2.2.6 NOTE: Python version was forced by py_require() ** testing if installed package keeps a record of temporary installation path * DONE (SpectriPy)