Johannes Rainer
| Snapshot Date: 2025-07-31 13:25 -0400 (Thu, 31 Jul 2025) |
| git_url: https://git.bioconductor.org/packages/SpectriPy |
| git_branch: devel |
| git_last_commit: 99baf1c |
| git_last_commit_date: 2025-07-16 07:09:00 -0400 (Wed, 16 Jul 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-01 12:11 -0400 (Fri, 01 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4796 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4534 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4578 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4519 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4517 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2050/2313 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SpectriPy 0.99.8 (landing page) Johannes Rainer
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | TIMEOUT | OK | ERROR | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the SpectriPy package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpectriPy.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: SpectriPy |
| Version: 0.99.8 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpectriPy |
| StartedAt: 2025-07-31 22:03:20 -0400 (Thu, 31 Jul 2025) |
| EndedAt: 2025-07-31 22:03:29 -0400 (Thu, 31 Jul 2025) |
| EllapsedTime: 9.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpectriPy
###
##############################################################################
##############################################################################
* checking for file ‘SpectriPy/DESCRIPTION’ ... OK
* preparing ‘SpectriPy’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘SpectriPy’ ...
** this is package ‘SpectriPy’ version ‘0.99.8’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
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Error: package or namespace load failed for ‘SpectriPy’:
.onLoad failed in loadNamespace() for 'SpectriPy', details:
call: value[[3L]](cond)
error: Failed to initialize Python environment and libraries.
Original message:
Could not find/load shared object file
Python configuration:
Environmental variables:
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:kr=\EOC:kl=\EOD:km:.:.:/Library/Frameworks/R.framework/Resources/share/texmf/tex/latex::/Library/Frameworks/R.framework/Resources/share/texmf/tex/latex:/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/biocbuild/Users/biocbuild/Library/Caches/org.R-project.R/R/reticulate/uv/cache/archive-v0/ga5gpehvX-V4HydOyYcFIga5gpehvX-V4HydOyYcFI020falsefalsepackage:_R_CHECK_PACKAGE_NAME_,abort,verbosepackage:_R_CHECK_PACKAGE_NAME_,abort,verbosetruetruetruetruetrueeqonlytruetrue0x1FA:0:0
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/Rtmpg5QytN/Rinst88f69573e8a/SpectriPy’
-----------------------------------
ERROR: package installation failed