Helder Nakaya
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/CEMiTool |
| Branch: master |
| Last Commit: d3739af |
| Last Changed Date: 2019-01-07 11:41:49 -0400 (Mon, 07 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:31:58 -0400 (Tue, 09 Apr 2019).
| Package 232/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CEMiTool 1.7.7 Helder Nakaya
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: CEMiTool |
| Version: 1.7.7 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CEMiTool_1.7.7.tar.gz && rm -rf CEMiTool.buildbin-libdir && mkdir CEMiTool.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CEMiTool.buildbin-libdir CEMiTool_1.7.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CEMiTool_1.7.7.zip && rm CEMiTool_1.7.7.tar.gz CEMiTool_1.7.7.zip |
| StartedAt: 2019-04-08 19:42:30 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 19:44:50 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 140.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CEMiTool_1.7.7.tar.gz && rm -rf CEMiTool.buildbin-libdir && mkdir CEMiTool.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CEMiTool.buildbin-libdir CEMiTool_1.7.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CEMiTool_1.7.7.zip && rm CEMiTool_1.7.7.tar.gz CEMiTool_1.7.7.zip
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install for i386
* installing *source* package 'CEMiTool' ...
** R
** data
*** moving datasets to lazyload DB
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CEMiTool'
finding HTML links ... done
CEMiTool-class html
adj_data html
cem html
cem_overlap html
cemitool html
diagnostic_report html
enrich_mods html
expr0 html
expr_data html
expr_pct_filter html
filter_expr html
find_modules html
fit_data html
generate_report html
get_adj html
get_beta_data html
get_cemitool_r2_beta html
get_connectivity html
get_hubs html
get_merged_mods html
get_mods html
get_phi html
gsea_data html
interactions_data html
makeContMatrix html
makeLimmaComp html
mod_activity html
mod_colors html
mod_compare html
mod_gsea html
mod_info html
mod_names html
mod_ora html
mod_summary html
module_genes html
module_to_gmt html
new_cem html
nmodules html
ora_data html
outer_join_merge html
overlap_community html
plot_beta_r2 html
plot_comembership html
plot_consensus html
plot_gsea html
plot_hist html
plot_interactions html
plot_mean_k html
plot_mean_var html
plot_ora html
plot_ora_single html
plot_profile html
plot_qq html
plot_sample_tree html
plot_similarity html
read_gmt html
sample_annot html
sample_annotation html
save_plots html
show-CEMiTool-method html
show_plot html
stat_overlap_mods html
vst html
write_files html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CEMiTool' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CEMiTool' as CEMiTool_1.7.7.zip
* DONE (CEMiTool)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CEMiTool' successfully unpacked and MD5 sums checked