Ti-Tai Wang
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/anamiR |
| Branch: RELEASE_3_7 |
| Last Commit: 6d7c434 |
| Last Changed Date: 2018-04-30 10:35:44 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:43:03 -0400 (Wed, 17 Oct 2018).
| Package 44/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| anamiR 1.8.0 Ti-Tai Wang
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | TIMEOUT | OK | |||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: anamiR |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/anamiR_1.8.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL anamiR_1.8.0.zip && rm anamiR_1.8.0.tar.gz anamiR_1.8.0.zip |
| StartedAt: 2018-10-16 20:39:45 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:41:30 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 104.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/anamiR_1.8.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL anamiR_1.8.0.zip && rm anamiR_1.8.0.tar.gz anamiR_1.8.0.zip
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install for i386
* installing *source* package 'anamiR' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'anamiR'
finding HTML links ... done
GSEA_ana html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/GSEA_ana.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/GSEA_ana.Rd:14: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
GSEA_res html
anamiR html
database_support html
differExp_continuous html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/differExp_continuous.Rd:10: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
differExp_discrete html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/differExp_discrete.Rd:12: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
egSymb html
enrichment html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/enrichment.Rd:82: file link 'phyper' in package 'stats' does not exist and so has been treated as a topic
heat_vis html
miR_converter html
mirna html
mrna html
msigdb.gs html
multi_Differ html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/multi_Differ.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
negative_cor html
normalization html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/normalization.Rd:18: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
pheno.mirna html
pheno.mrna html
table_pre html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'anamiR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'anamiR' as anamiR_1.8.0.zip
* DONE (anamiR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'anamiR' successfully unpacked and MD5 sums checked
In R CMD INSTALL