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BioC 3.3: BUILD BIN report for GenomicFeatures on windows2.bioconductor.org

This page was generated on 2015-10-27 12:14:34 -0400 (Tue, 27 Oct 2015).

Package 422/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicFeatures 1.23.4
Bioconductor Package Maintainer
Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GenomicFeatures
Last Changed Rev: 109858 / Revision: 109948
Last Changed Date: 2015-10-23 00:47:11 -0400 (Fri, 23 Oct 2015)
linux2.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
windows2.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: GenomicFeatures
Version: 1.23.4
Command: cd GenomicFeatures.buildbin-libdir/GenomicFeatures && zip -r ../../GenomicFeatures_1.23.4.zip . & cd ../..
StartedAt: 2015-10-27 07:31:37 -0400 (Tue, 27 Oct 2015)
EndedAt: 2015-10-27 07:31:51 -0400 (Tue, 27 Oct 2015)
EllapsedTime: 14.7 seconds
RetCode: 0
Status:  OK  
PackageFile: GenomicFeatures_1.23.4.zip
PackageFileSize: 2.216 MiB

Command output

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###
### Running command:
###
###   cd GenomicFeatures.buildbin-libdir/GenomicFeatures && zip -r ../../GenomicFeatures_1.23.4.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (188 bytes security) (deflated 56%)
  adding: DESCRIPTION (188 bytes security) (deflated 54%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/GenomicFeatures.pdf (188 bytes security) (deflated 11%)
  adding: doc/GenomicFeatures.Rnw (188 bytes security) (deflated 65%)
  adding: doc/index.html (188 bytes security) (deflated 58%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/Biomart_Ensembl_sample.sqlite (188 bytes security) (deflated 78%)
  adding: extdata/cD.exByEdge-SG-Vig.Rda (188 bytes security) (deflated 1%)
  adding: extdata/cD.exsByGenes-SG-Vig.Rda (188 bytes security) (deflated 2%)
  adding: extdata/events.Rda (188 bytes security) (stored 0%)
  adding: extdata/FeatureDb.sqlite (188 bytes security) (deflated 62%)
  adding: extdata/GFF3_files/ (208 bytes security) (stored 0%)
  adding: extdata/GFF3_files/a.gff3 (188 bytes security) (deflated 88%)
  adding: extdata/GFF3_files/a.sqlite (188 bytes security) (deflated 69%)
  adding: extdata/GFF3_files/dmel-1000-r5.11.filtered.gff (188 bytes security) (deflated 88%)
  adding: extdata/GFF3_files/dmel-1000-r5.11.filtered.sqlite (188 bytes security) (deflated 67%)
  adding: extdata/GFF3_files/NC_011025.gff (188 bytes security) (deflated 81%)
  adding: extdata/GFF3_files/TheCanonicalGene_v1.gff3 (188 bytes security) (deflated 81%)
  adding: extdata/GFF3_files/TheCanonicalGene_v2.gff3 (188 bytes security) (deflated 80%)
  adding: extdata/GTF_files/ (208 bytes security) (stored 0%)
  adding: extdata/GTF_files/Aedes_aegypti.partial.gtf (188 bytes security) (deflated 92%)
  adding: extdata/GTF_files/Aedes_aegypti.partial.sqlite (188 bytes security) (deflated 72%)
  adding: extdata/GTF_files/test1.gtf (188 bytes security) (deflated 80%)
  adding: extdata/hg19_knownGene_sample.rda (188 bytes security) (stored 0%)
  adding: extdata/hg19_knownGene_sample.sqlite (188 bytes security) (deflated 61%)
  adding: extdata/hg19_knownToLocusLink_sample.rda (188 bytes security) (stored 0%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 82%)
  adding: help/GenomicFeatures.rdb (188 bytes security) (deflated 1%)
  adding: help/GenomicFeatures.rdx (188 bytes security) (stored 0%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 87%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 69%)
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  adding: Meta/ (208 bytes security) (stored 0%)
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  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 68%)
  adding: NEWS (188 bytes security) (deflated 65%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/GenomicFeatures (188 bytes security) (deflated 41%)
  adding: R/GenomicFeatures.rdb (188 bytes security) (deflated 24%)
  adding: R/GenomicFeatures.rdx (188 bytes security) (deflated 0%)
  adding: script/ (208 bytes security) (stored 0%)
  adding: script/maketRNAFDb.R (188 bytes security) (deflated 71%)
  adding: script/makeTxDbs.R (188 bytes security) (deflated 83%)
  adding: txdb-template/ (208 bytes security) (stored 0%)
  adding: txdb-template/DESCRIPTION (188 bytes security) (deflated 34%)
  adding: txdb-template/inst/ (208 bytes security) (stored 0%)
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  adding: txdb-template/man/ (208 bytes security) (stored 0%)
  adding: txdb-template/man/package.Rd (188 bytes security) (deflated 47%)
  adding: txdb-template/NAMESPACE (188 bytes security) (deflated 21%)
  adding: txdb-template/R/ (208 bytes security) (stored 0%)
  adding: txdb-template/R/zzz.R (188 bytes security) (deflated 46%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_coordinate-mapping-methods.R (188 bytes security) (deflated 83%)
  adding: unitTests/test_disjointExons.R (188 bytes security) (deflated 58%)
  adding: unitTests/test_getPromoterSeq-methods.R (188 bytes security) (deflated 73%)
  adding: unitTests/test_makeIdsForUniqueDataFrameRows.R (188 bytes security) (deflated 53%)
  adding: unitTests/test_makeTxDb.R (188 bytes security) (deflated 76%)
  adding: unitTests/test_makeTxDbFromBiomart.R (188 bytes security) (deflated 66%)
  adding: unitTests/test_makeTxDbFromGFF.R (188 bytes security) (deflated 67%)
  adding: unitTests/test_makeTxDbFromGRanges.R (188 bytes security) (deflated 84%)
  adding: unitTests/test_makeTxDbFromUCSC.R (188 bytes security) (deflated 74%)
  adding: unitTests/test_select-methods.R (188 bytes security) (deflated 80%)
  adding: unitTests/test_transcripts.R (188 bytes security) (deflated 82%)
  adding: unitTests/test_transcriptsBy.R (188 bytes security) (deflated 81%)
  adding: unitTests/test_transcriptsByOverlaps.R (188 bytes security) (deflated 81%)
  adding: unitTests/test_TxDb_seqinfo.R (188 bytes security) (deflated 74%)