| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-20 11:36 -0400 (Mon, 20 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4961 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4690 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4627 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1023/2404 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HPiP 1.17.2 (landing page) Matineh Rahmatbakhsh
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
| See other builds for HPiP in R Universe. | ||||||||||||||
|
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: HPiP |
| Version: 1.17.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.17.2.tar.gz |
| StartedAt: 2026-04-19 20:13:02 -0400 (Sun, 19 Apr 2026) |
| EndedAt: 2026-04-19 20:16:28 -0400 (Sun, 19 Apr 2026) |
| EllapsedTime: 205.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: HPiP.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.17.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/HPiP.Rcheck’
* using R version 4.6.0 alpha (2026-04-08 r89818)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.3.1
* using session charset: UTF-8
* current time: 2026-04-20 00:13:02 UTC
* using option ‘--no-vignettes’
* checking for file ‘HPiP/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘HPiP’ version ‘1.17.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HPiP’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License stub is invalid DCF.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) getHPI.Rd:29: Lost braces
29 | then the Kronecker product is the code{(pm × qn)} block matrix
| ^
* checking Rd metadata ... OK
* checking Rd cross-references ... INFO
Package unavailable to check Rd xrefs: ‘ftrCOOL’
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
corr_plot 17.197 0.099 17.330
var_imp 17.038 0.157 17.360
FSmethod 17.082 0.085 17.418
pred_ensembel 6.420 0.195 5.878
enrichfindP 0.205 0.043 10.816
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘runTests.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/HPiP.Rcheck/00check.log’
for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘HPiP’ ... ** this is package ‘HPiP’ version ‘1.17.2’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.6.0 alpha (2026-04-08 r89818)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage('HPiP')
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
avNNet
Loading required package: ggplot2
Loading required package: lattice
Fitting Repeat 1
# weights: 103
initial value 94.639731
final value 94.052910
converged
Fitting Repeat 2
# weights: 103
initial value 102.059457
final value 94.052910
converged
Fitting Repeat 3
# weights: 103
initial value 98.974437
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 100.478024
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 103.310445
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 106.560825
final value 93.454900
converged
Fitting Repeat 2
# weights: 305
initial value 103.621170
final value 94.052910
converged
Fitting Repeat 3
# weights: 305
initial value 106.788866
iter 10 value 93.035243
iter 20 value 91.938808
iter 30 value 91.938121
final value 91.938092
converged
Fitting Repeat 4
# weights: 305
initial value 99.095468
final value 94.052910
converged
Fitting Repeat 5
# weights: 305
initial value 104.681886
final value 93.582418
converged
Fitting Repeat 1
# weights: 507
initial value 95.335743
final value 93.582418
converged
Fitting Repeat 2
# weights: 507
initial value 103.786324
final value 94.052910
converged
Fitting Repeat 3
# weights: 507
initial value 102.714936
final value 94.052910
converged
Fitting Repeat 4
# weights: 507
initial value 101.733560
final value 94.052910
converged
Fitting Repeat 5
# weights: 507
initial value 126.323389
final value 93.582418
converged
Fitting Repeat 1
# weights: 103
initial value 100.382606
iter 10 value 94.050998
iter 20 value 85.028127
iter 30 value 83.022225
iter 40 value 81.746968
iter 50 value 81.283446
iter 60 value 80.529419
iter 70 value 80.431208
final value 80.431197
converged
Fitting Repeat 2
# weights: 103
initial value 101.612529
iter 10 value 94.051160
iter 20 value 92.184980
iter 30 value 90.596759
iter 40 value 90.246348
iter 50 value 90.184927
final value 90.184896
converged
Fitting Repeat 3
# weights: 103
initial value 105.669416
iter 10 value 94.065353
iter 20 value 92.737995
iter 30 value 91.281590
iter 40 value 86.808609
iter 50 value 82.542664
iter 60 value 81.587567
iter 70 value 81.457361
iter 80 value 81.271467
iter 90 value 80.966947
iter 100 value 80.305626
final value 80.305626
stopped after 100 iterations
Fitting Repeat 4
# weights: 103
initial value 99.866772
iter 10 value 93.568926
iter 20 value 89.720416
iter 30 value 88.882158
iter 40 value 82.943718
iter 50 value 82.324619
iter 60 value 82.031147
iter 70 value 81.499774
iter 80 value 81.111491
iter 90 value 81.087570
iter 100 value 81.052562
final value 81.052562
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 100.057310
iter 10 value 94.010191
iter 20 value 92.130172
iter 30 value 85.439010
iter 40 value 84.158662
iter 50 value 83.690615
iter 60 value 83.442243
iter 70 value 81.735613
iter 80 value 80.505467
iter 90 value 79.900513
iter 100 value 79.869727
final value 79.869727
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 101.901255
iter 10 value 94.094428
iter 20 value 85.435619
iter 30 value 83.051850
iter 40 value 82.898528
iter 50 value 82.560181
iter 60 value 82.217758
iter 70 value 81.685309
iter 80 value 80.510017
iter 90 value 79.993065
iter 100 value 78.804302
final value 78.804302
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 104.936194
iter 10 value 94.066192
iter 20 value 86.817518
iter 30 value 85.047556
iter 40 value 84.457567
iter 50 value 82.975006
iter 60 value 82.224577
iter 70 value 81.491013
iter 80 value 79.997757
iter 90 value 79.419409
iter 100 value 78.585838
final value 78.585838
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 101.212581
iter 10 value 92.482609
iter 20 value 90.891657
iter 30 value 88.549402
iter 40 value 84.901146
iter 50 value 84.214025
iter 60 value 82.936238
iter 70 value 82.400223
iter 80 value 81.886555
iter 90 value 81.205473
iter 100 value 79.685264
final value 79.685264
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 106.205936
iter 10 value 93.993593
iter 20 value 91.660144
iter 30 value 83.681305
iter 40 value 82.516610
iter 50 value 81.958120
iter 60 value 81.791578
iter 70 value 80.738242
iter 80 value 79.750880
iter 90 value 78.537883
iter 100 value 78.336637
final value 78.336637
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 107.019270
iter 10 value 95.533691
iter 20 value 85.100563
iter 30 value 82.911591
iter 40 value 80.110299
iter 50 value 78.764407
iter 60 value 78.212910
iter 70 value 78.116774
iter 80 value 78.063017
iter 90 value 77.948445
iter 100 value 77.817003
final value 77.817003
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 133.976010
iter 10 value 94.882846
iter 20 value 84.083361
iter 30 value 82.976257
iter 40 value 80.830460
iter 50 value 79.727412
iter 60 value 79.285541
iter 70 value 78.565319
iter 80 value 78.099817
iter 90 value 78.022546
iter 100 value 77.972677
final value 77.972677
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 105.811019
iter 10 value 94.055334
iter 20 value 86.012645
iter 30 value 84.022683
iter 40 value 83.304330
iter 50 value 83.046497
iter 60 value 82.683674
iter 70 value 82.227815
iter 80 value 82.102926
iter 90 value 80.310815
iter 100 value 79.368903
final value 79.368903
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 112.264556
iter 10 value 94.064337
iter 20 value 90.900529
iter 30 value 84.052321
iter 40 value 83.504998
iter 50 value 82.830489
iter 60 value 80.084835
iter 70 value 78.418634
iter 80 value 77.893685
iter 90 value 77.796307
iter 100 value 77.751861
final value 77.751861
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 105.776700
iter 10 value 94.078382
iter 20 value 86.073970
iter 30 value 85.234786
iter 40 value 84.388354
iter 50 value 82.723242
iter 60 value 79.547877
iter 70 value 78.872926
iter 80 value 78.435647
iter 90 value 78.017815
iter 100 value 77.915060
final value 77.915060
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 103.807877
iter 10 value 94.215964
iter 20 value 93.878050
iter 30 value 93.673006
iter 40 value 89.257113
iter 50 value 88.188819
iter 60 value 87.425529
iter 70 value 86.686854
iter 80 value 82.399236
iter 90 value 80.734640
iter 100 value 80.167614
final value 80.167614
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 97.156072
final value 94.054831
converged
Fitting Repeat 2
# weights: 103
initial value 101.432812
final value 93.584045
converged
Fitting Repeat 3
# weights: 103
initial value 94.725703
iter 10 value 93.584080
iter 20 value 93.583130
iter 30 value 93.582738
final value 93.582734
converged
Fitting Repeat 4
# weights: 103
initial value 100.875714
iter 10 value 90.312423
iter 20 value 90.207543
final value 90.207512
converged
Fitting Repeat 5
# weights: 103
initial value 101.117454
final value 94.054401
converged
Fitting Repeat 1
# weights: 305
initial value 98.674087
iter 10 value 91.697153
iter 20 value 91.693878
iter 30 value 91.265813
iter 40 value 89.773375
iter 50 value 85.612533
iter 60 value 85.439584
iter 70 value 85.177436
iter 80 value 85.172960
iter 90 value 82.339078
iter 100 value 81.366484
final value 81.366484
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 105.160637
iter 10 value 93.587967
iter 20 value 93.584926
iter 30 value 93.582649
iter 30 value 93.582649
iter 30 value 93.582649
final value 93.582649
converged
Fitting Repeat 3
# weights: 305
initial value 97.765139
iter 10 value 94.051868
iter 20 value 93.998160
iter 30 value 93.583516
final value 93.582629
converged
Fitting Repeat 4
# weights: 305
initial value 96.226727
iter 10 value 93.587379
iter 20 value 87.541713
iter 30 value 86.460018
iter 40 value 85.168666
iter 50 value 85.153339
iter 60 value 84.846206
iter 70 value 84.752942
final value 84.752852
converged
Fitting Repeat 5
# weights: 305
initial value 100.312631
iter 10 value 94.057721
iter 20 value 93.801430
iter 30 value 93.583058
final value 93.582667
converged
Fitting Repeat 1
# weights: 507
initial value 104.302297
iter 10 value 94.052059
iter 20 value 94.046320
final value 94.044901
converged
Fitting Repeat 2
# weights: 507
initial value 101.789139
iter 10 value 94.051440
iter 20 value 94.044255
iter 30 value 87.520200
iter 40 value 87.059691
iter 50 value 87.052820
iter 60 value 85.508494
iter 70 value 81.882646
iter 80 value 81.611538
iter 90 value 79.224441
iter 100 value 79.207971
final value 79.207971
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 103.622933
iter 10 value 94.061233
iter 20 value 93.801100
iter 30 value 93.583404
iter 30 value 93.583403
iter 30 value 93.583403
final value 93.583403
converged
Fitting Repeat 4
# weights: 507
initial value 116.963409
iter 10 value 93.912147
iter 20 value 93.806417
iter 30 value 91.303490
iter 40 value 90.711743
iter 50 value 90.676850
iter 60 value 90.344183
final value 90.344121
converged
Fitting Repeat 5
# weights: 507
initial value 94.525567
iter 10 value 94.054674
iter 20 value 83.113852
iter 30 value 82.555167
iter 40 value 82.413154
final value 82.412582
converged
Fitting Repeat 1
# weights: 103
initial value 105.753692
iter 10 value 92.115469
iter 20 value 91.935632
iter 30 value 91.142632
iter 40 value 90.970149
final value 90.970130
converged
Fitting Repeat 2
# weights: 103
initial value 96.814103
final value 94.043244
converged
Fitting Repeat 3
# weights: 103
initial value 107.223242
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 96.911422
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 112.366666
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 99.807924
final value 94.043243
converged
Fitting Repeat 2
# weights: 305
initial value 101.237578
iter 10 value 93.887527
iter 20 value 91.396866
final value 91.346308
converged
Fitting Repeat 3
# weights: 305
initial value 127.553670
iter 10 value 94.043243
iter 10 value 94.043243
iter 10 value 94.043243
final value 94.043243
converged
Fitting Repeat 4
# weights: 305
initial value 101.640415
final value 94.052910
converged
Fitting Repeat 5
# weights: 305
initial value 100.565302
iter 10 value 93.669808
iter 10 value 93.669808
iter 10 value 93.669808
final value 93.669808
converged
Fitting Repeat 1
# weights: 507
initial value 101.212582
final value 93.720939
converged
Fitting Repeat 2
# weights: 507
initial value 99.999811
final value 94.052910
converged
Fitting Repeat 3
# weights: 507
initial value 113.130264
final value 94.043243
converged
Fitting Repeat 4
# weights: 507
initial value 109.870261
final value 94.052910
converged
Fitting Repeat 5
# weights: 507
initial value 97.798594
final value 94.043243
converged
Fitting Repeat 1
# weights: 103
initial value 96.575825
iter 10 value 94.050788
iter 20 value 91.755177
iter 30 value 90.262302
iter 40 value 90.105728
iter 50 value 90.029821
iter 60 value 85.222757
iter 70 value 84.839214
iter 80 value 81.471485
iter 90 value 81.263336
iter 100 value 80.441962
final value 80.441962
stopped after 100 iterations
Fitting Repeat 2
# weights: 103
initial value 95.816012
iter 10 value 94.056751
iter 20 value 93.988843
iter 30 value 87.297514
iter 40 value 86.681366
iter 50 value 86.385260
iter 60 value 86.295545
iter 70 value 86.276762
iter 80 value 84.538726
iter 90 value 84.249800
iter 100 value 84.246869
final value 84.246869
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 98.189270
iter 10 value 94.082346
iter 20 value 94.057009
iter 30 value 93.992168
iter 40 value 86.620921
iter 50 value 84.355930
iter 60 value 83.119255
iter 70 value 82.957287
iter 80 value 82.773650
iter 90 value 81.529680
iter 100 value 80.521383
final value 80.521383
stopped after 100 iterations
Fitting Repeat 4
# weights: 103
initial value 105.157999
iter 10 value 94.084810
iter 20 value 94.053892
iter 30 value 93.546357
iter 40 value 92.567225
iter 50 value 92.546213
iter 60 value 87.029258
iter 70 value 86.916126
iter 80 value 86.755177
iter 90 value 86.668530
iter 100 value 85.104264
final value 85.104264
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 101.388474
iter 10 value 94.040217
iter 20 value 92.665576
iter 30 value 92.551569
iter 40 value 91.747340
iter 40 value 91.747340
iter 50 value 84.105709
iter 60 value 83.438746
iter 70 value 83.231020
iter 80 value 82.889888
iter 90 value 82.665867
iter 100 value 80.313622
final value 80.313622
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 104.671690
iter 10 value 94.003085
iter 20 value 89.598414
iter 30 value 85.719161
iter 40 value 82.802154
iter 50 value 82.078101
iter 60 value 81.412802
iter 70 value 81.193820
iter 80 value 80.344749
iter 90 value 80.211078
iter 100 value 79.543696
final value 79.543696
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 109.327612
iter 10 value 93.595228
iter 20 value 90.171017
iter 30 value 88.731251
iter 40 value 88.580449
iter 50 value 88.536590
iter 60 value 88.512790
iter 70 value 88.307485
iter 80 value 85.103025
iter 90 value 83.441824
iter 100 value 83.192393
final value 83.192393
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 117.307938
iter 10 value 94.072839
iter 20 value 92.277062
iter 30 value 88.674875
iter 40 value 85.820107
iter 50 value 81.269098
iter 60 value 80.512842
iter 70 value 80.047538
iter 80 value 79.445209
iter 90 value 79.204064
iter 100 value 78.929093
final value 78.929093
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 108.317702
iter 10 value 94.065663
iter 20 value 93.925302
iter 30 value 93.155947
iter 40 value 84.609441
iter 50 value 81.722527
iter 60 value 81.144043
iter 70 value 80.603465
iter 80 value 79.698056
iter 90 value 79.540702
iter 100 value 79.521912
final value 79.521912
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 99.655032
iter 10 value 88.469621
iter 20 value 87.165312
iter 30 value 84.304873
iter 40 value 81.222498
iter 50 value 80.145511
iter 60 value 79.166862
iter 70 value 79.137191
iter 80 value 78.879915
iter 90 value 78.705575
iter 100 value 78.651622
final value 78.651622
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 108.406684
iter 10 value 94.553143
iter 20 value 88.948689
iter 30 value 85.929845
iter 40 value 85.693666
iter 50 value 85.611322
iter 60 value 84.965716
iter 70 value 83.370648
iter 80 value 80.945593
iter 90 value 80.215463
iter 100 value 79.385744
final value 79.385744
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 122.531826
iter 10 value 94.042832
iter 20 value 85.927096
iter 30 value 85.168937
iter 40 value 84.859430
iter 50 value 81.618902
iter 60 value 80.631931
iter 70 value 79.455449
iter 80 value 79.379339
iter 90 value 79.164766
iter 100 value 79.005454
final value 79.005454
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 125.802220
iter 10 value 94.031781
iter 20 value 90.673907
iter 30 value 88.619411
iter 40 value 82.275941
iter 50 value 80.955993
iter 60 value 80.758866
iter 70 value 80.513758
iter 80 value 80.168777
iter 90 value 79.738573
iter 100 value 79.547047
final value 79.547047
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 105.727705
iter 10 value 93.971597
iter 20 value 90.738735
iter 30 value 86.090312
iter 40 value 83.872849
iter 50 value 83.314189
iter 60 value 82.518757
iter 70 value 81.923322
iter 80 value 80.651990
iter 90 value 80.097697
iter 100 value 79.908842
final value 79.908842
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 104.946799
iter 10 value 94.388294
iter 20 value 86.976046
iter 30 value 85.170272
iter 40 value 83.262875
iter 50 value 82.200213
iter 60 value 80.826506
iter 70 value 80.499000
iter 80 value 79.683089
iter 90 value 78.976986
iter 100 value 78.625964
final value 78.625964
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 106.358130
iter 10 value 84.739156
iter 20 value 84.590709
final value 84.590456
converged
Fitting Repeat 2
# weights: 103
initial value 97.168796
final value 94.054897
converged
Fitting Repeat 3
# weights: 103
initial value 95.042499
final value 94.054509
converged
Fitting Repeat 4
# weights: 103
initial value 94.246232
final value 94.054649
converged
Fitting Repeat 5
# weights: 103
initial value 114.764683
final value 94.055901
converged
Fitting Repeat 1
# weights: 305
initial value 96.592970
iter 10 value 94.057912
iter 20 value 94.043014
iter 30 value 89.380618
final value 88.197732
converged
Fitting Repeat 2
# weights: 305
initial value 98.774528
iter 10 value 94.048250
iter 20 value 93.922225
iter 30 value 91.550645
final value 91.542331
converged
Fitting Repeat 3
# weights: 305
initial value 95.608311
iter 10 value 94.086670
iter 20 value 94.079967
iter 30 value 87.403647
iter 40 value 83.836447
iter 50 value 83.686768
iter 60 value 83.616041
iter 70 value 83.406972
final value 83.406177
converged
Fitting Repeat 4
# weights: 305
initial value 95.930108
iter 10 value 94.057360
iter 20 value 94.051052
iter 30 value 93.975195
iter 40 value 89.405749
iter 50 value 88.304274
iter 60 value 86.961801
iter 70 value 86.635038
iter 80 value 85.821705
iter 90 value 85.627505
iter 100 value 85.451768
final value 85.451768
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 106.071106
iter 10 value 94.071671
iter 20 value 94.065679
iter 30 value 91.856580
iter 40 value 91.846421
iter 50 value 91.840866
iter 60 value 91.839784
iter 70 value 91.813747
iter 80 value 85.664129
iter 90 value 85.383280
iter 100 value 85.380046
final value 85.380046
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 106.102210
iter 10 value 94.061064
iter 20 value 92.489614
iter 30 value 90.398362
iter 30 value 90.398361
iter 30 value 90.398361
final value 90.398361
converged
Fitting Repeat 2
# weights: 507
initial value 98.382050
iter 10 value 92.710676
iter 20 value 85.439641
iter 30 value 84.663955
iter 40 value 84.492026
iter 50 value 84.424442
iter 60 value 84.423657
iter 70 value 84.093811
iter 80 value 83.392168
iter 90 value 83.342390
iter 100 value 83.340397
final value 83.340397
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 98.228952
iter 10 value 92.026007
iter 20 value 89.606085
iter 30 value 87.819990
iter 40 value 87.735554
iter 50 value 87.731699
iter 60 value 87.722683
iter 70 value 87.714393
iter 80 value 87.706828
iter 90 value 87.705784
iter 100 value 87.683505
final value 87.683505
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 103.240097
iter 10 value 94.060498
iter 20 value 94.052944
iter 30 value 93.966621
iter 40 value 93.953093
iter 50 value 92.457006
iter 60 value 90.532311
iter 70 value 90.471005
iter 80 value 89.590557
iter 90 value 88.336047
iter 100 value 88.335694
final value 88.335694
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 98.350185
iter 10 value 94.060762
iter 20 value 93.904087
iter 30 value 84.606052
iter 40 value 83.880593
iter 50 value 83.876817
iter 60 value 83.876326
iter 70 value 83.875225
iter 80 value 83.872797
iter 90 value 83.407177
iter 100 value 81.948432
final value 81.948432
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 97.175920
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 98.901123
final value 94.467391
converged
Fitting Repeat 3
# weights: 103
initial value 95.197947
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 94.010174
iter 10 value 93.684377
final value 93.683142
converged
Fitting Repeat 5
# weights: 103
initial value 97.113624
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 97.709821
final value 94.467391
converged
Fitting Repeat 2
# weights: 305
initial value 96.599436
final value 94.484211
converged
Fitting Repeat 3
# weights: 305
initial value 104.361418
final value 94.484211
converged
Fitting Repeat 4
# weights: 305
initial value 96.936021
final value 94.484211
converged
Fitting Repeat 5
# weights: 305
initial value 96.656520
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 102.516839
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 95.597877
iter 10 value 91.743806
iter 20 value 85.965967
iter 30 value 85.879872
iter 40 value 85.864582
final value 85.864393
converged
Fitting Repeat 3
# weights: 507
initial value 104.695526
final value 94.467391
converged
Fitting Repeat 4
# weights: 507
initial value 96.420684
iter 10 value 92.617939
final value 92.613874
converged
Fitting Repeat 5
# weights: 507
initial value 98.748179
iter 10 value 94.105263
iter 10 value 94.105262
iter 10 value 94.105262
final value 94.105262
converged
Fitting Repeat 1
# weights: 103
initial value 98.312630
iter 10 value 94.870309
iter 20 value 90.635069
iter 30 value 85.286345
iter 40 value 83.669799
iter 50 value 82.348061
iter 60 value 81.871150
iter 70 value 81.620466
final value 81.620459
converged
Fitting Repeat 2
# weights: 103
initial value 98.510657
iter 10 value 94.485805
iter 20 value 87.229488
iter 30 value 84.010309
iter 40 value 83.553622
iter 50 value 82.998823
iter 60 value 82.959054
iter 70 value 82.754298
iter 80 value 82.727497
iter 80 value 82.727497
iter 80 value 82.727497
final value 82.727497
converged
Fitting Repeat 3
# weights: 103
initial value 106.846784
iter 10 value 94.479701
iter 20 value 86.017817
iter 30 value 84.967424
iter 40 value 84.161057
iter 50 value 83.503941
iter 60 value 82.135296
iter 70 value 81.717050
iter 80 value 81.381863
iter 90 value 81.378620
final value 81.378618
converged
Fitting Repeat 4
# weights: 103
initial value 115.897618
iter 10 value 94.421076
iter 20 value 91.342628
iter 30 value 90.196165
iter 40 value 88.114966
iter 50 value 86.966352
iter 60 value 83.811160
iter 70 value 82.689017
iter 80 value 82.311071
iter 90 value 82.178955
iter 100 value 81.506995
final value 81.506995
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 108.935288
iter 10 value 94.365602
iter 20 value 91.796870
iter 30 value 90.198513
iter 40 value 89.576822
iter 50 value 84.170318
iter 60 value 84.014734
iter 70 value 83.631999
iter 80 value 82.438988
iter 90 value 81.627487
final value 81.620459
converged
Fitting Repeat 1
# weights: 305
initial value 104.068544
iter 10 value 94.501698
iter 20 value 94.277242
iter 30 value 92.208875
iter 40 value 90.959941
iter 50 value 86.297021
iter 60 value 82.892833
iter 70 value 81.621548
iter 80 value 80.605949
iter 90 value 80.436466
iter 100 value 80.217474
final value 80.217474
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 111.405867
iter 10 value 94.656742
iter 20 value 94.439025
iter 30 value 87.439400
iter 40 value 87.098328
iter 50 value 83.726975
iter 60 value 82.905790
iter 70 value 82.100206
iter 80 value 81.322297
iter 90 value 81.025524
iter 100 value 80.446246
final value 80.446246
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 99.385910
iter 10 value 94.509634
iter 20 value 93.848040
iter 30 value 89.756372
iter 40 value 87.397074
iter 50 value 84.382645
iter 60 value 83.878130
iter 70 value 83.331098
iter 80 value 82.837800
iter 90 value 81.117638
iter 100 value 80.879518
final value 80.879518
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 106.240035
iter 10 value 94.361927
iter 20 value 89.018583
iter 30 value 85.633657
iter 40 value 85.160486
iter 50 value 85.050438
iter 60 value 84.698702
iter 70 value 84.358957
iter 80 value 83.482483
iter 90 value 83.074594
iter 100 value 82.446974
final value 82.446974
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 105.789373
iter 10 value 94.494640
iter 20 value 93.493046
iter 30 value 88.637459
iter 40 value 86.669953
iter 50 value 85.118583
iter 60 value 83.829987
iter 70 value 83.117256
iter 80 value 81.672344
iter 90 value 80.824019
iter 100 value 80.657156
final value 80.657156
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 123.683676
iter 10 value 94.724804
iter 20 value 94.113788
iter 30 value 87.068093
iter 40 value 84.569383
iter 50 value 82.442288
iter 60 value 81.892584
iter 70 value 81.584059
iter 80 value 81.047515
iter 90 value 80.623240
iter 100 value 80.260349
final value 80.260349
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 109.242488
iter 10 value 94.706067
iter 20 value 92.897676
iter 30 value 84.594573
iter 40 value 82.580996
iter 50 value 81.829434
iter 60 value 81.519740
iter 70 value 80.857249
iter 80 value 80.814847
iter 90 value 80.568683
iter 100 value 80.205640
final value 80.205640
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 117.490825
iter 10 value 94.736650
iter 20 value 89.254069
iter 30 value 86.326018
iter 40 value 84.071544
iter 50 value 82.903677
iter 60 value 82.431628
iter 70 value 81.854275
iter 80 value 81.247471
iter 90 value 80.639771
iter 100 value 80.503192
final value 80.503192
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 105.212487
iter 10 value 95.038281
iter 20 value 94.468094
iter 30 value 92.314617
iter 40 value 88.690651
iter 50 value 85.713650
iter 60 value 82.849894
iter 70 value 81.053694
iter 80 value 80.803405
iter 90 value 80.548624
iter 100 value 80.471684
final value 80.471684
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 144.624049
iter 10 value 95.346150
iter 20 value 94.518559
iter 30 value 91.931019
iter 40 value 87.075400
iter 50 value 83.759932
iter 60 value 82.759489
iter 70 value 81.803690
iter 80 value 81.414583
iter 90 value 81.003237
iter 100 value 80.557736
final value 80.557736
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 98.725195
iter 10 value 94.114807
iter 20 value 94.114293
iter 30 value 94.113532
final value 94.113415
converged
Fitting Repeat 2
# weights: 103
initial value 105.715030
iter 10 value 94.485754
iter 20 value 94.371219
iter 30 value 93.220432
iter 30 value 93.220431
iter 30 value 93.220431
final value 93.220431
converged
Fitting Repeat 3
# weights: 103
initial value 117.707029
iter 10 value 94.485716
iter 20 value 94.474768
final value 94.467415
converged
Fitting Repeat 4
# weights: 103
initial value 96.100125
iter 10 value 94.485976
iter 20 value 94.484229
iter 30 value 94.138832
final value 94.138684
converged
Fitting Repeat 5
# weights: 103
initial value 94.880910
final value 94.485661
converged
Fitting Repeat 1
# weights: 305
initial value 101.465055
iter 10 value 94.488912
iter 20 value 91.842073
iter 30 value 91.024363
iter 40 value 88.650594
iter 50 value 87.613110
iter 60 value 87.569683
final value 87.569554
converged
Fitting Repeat 2
# weights: 305
initial value 100.231488
iter 10 value 93.356472
iter 20 value 93.330211
iter 30 value 91.727787
iter 40 value 90.882213
iter 50 value 90.875594
iter 60 value 90.658344
iter 70 value 90.386653
iter 80 value 90.344589
iter 90 value 90.343130
final value 90.343129
converged
Fitting Repeat 3
# weights: 305
initial value 99.243675
iter 10 value 94.489081
iter 20 value 94.415570
iter 30 value 84.866188
iter 40 value 84.764167
final value 84.764150
converged
Fitting Repeat 4
# weights: 305
initial value 121.855684
iter 10 value 94.488785
iter 20 value 94.468473
final value 93.874709
converged
Fitting Repeat 5
# weights: 305
initial value 95.289521
iter 10 value 94.472415
iter 20 value 94.440697
iter 30 value 92.836492
iter 40 value 83.152549
iter 50 value 83.027244
final value 83.025906
converged
Fitting Repeat 1
# weights: 507
initial value 106.525773
iter 10 value 94.491745
iter 20 value 94.385746
iter 30 value 92.473062
iter 40 value 88.316124
iter 50 value 82.950648
iter 60 value 80.742261
iter 70 value 80.186701
iter 80 value 80.127694
iter 90 value 80.105249
iter 100 value 80.005048
final value 80.005048
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 104.798058
iter 10 value 94.475508
iter 20 value 94.470788
iter 30 value 92.993623
iter 40 value 92.365995
iter 50 value 92.363880
iter 50 value 92.363879
iter 50 value 92.363879
final value 92.363879
converged
Fitting Repeat 3
# weights: 507
initial value 101.764414
iter 10 value 83.175347
iter 20 value 82.731806
iter 30 value 82.720432
iter 40 value 82.667822
final value 82.666711
converged
Fitting Repeat 4
# weights: 507
initial value 99.623675
iter 10 value 94.489155
iter 20 value 94.476582
iter 30 value 86.144158
iter 40 value 84.193913
iter 50 value 83.185637
iter 60 value 83.012487
iter 70 value 83.009768
iter 80 value 83.008875
iter 90 value 83.007552
final value 83.007508
converged
Fitting Repeat 5
# weights: 507
initial value 104.078580
iter 10 value 94.478310
iter 20 value 93.692560
iter 30 value 93.674967
iter 40 value 92.259148
iter 50 value 91.490908
iter 60 value 81.008655
iter 70 value 80.456114
iter 80 value 80.267729
iter 90 value 80.006939
iter 100 value 79.999978
final value 79.999978
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 103.224063
final value 94.026542
converged
Fitting Repeat 2
# weights: 103
initial value 97.675357
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 104.302006
iter 10 value 93.320226
final value 93.320225
converged
Fitting Repeat 4
# weights: 103
initial value 97.487087
final value 94.484211
converged
Fitting Repeat 5
# weights: 103
initial value 100.758405
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 96.262156
final value 94.039474
converged
Fitting Repeat 2
# weights: 305
initial value 102.462867
final value 94.484211
converged
Fitting Repeat 3
# weights: 305
initial value 108.475782
final value 94.026542
converged
Fitting Repeat 4
# weights: 305
initial value 101.635263
iter 10 value 93.809655
final value 93.809648
converged
Fitting Repeat 5
# weights: 305
initial value 95.570314
iter 10 value 92.552732
final value 92.552727
converged
Fitting Repeat 1
# weights: 507
initial value 130.043142
final value 93.289722
converged
Fitting Repeat 2
# weights: 507
initial value 97.141407
iter 10 value 92.571959
final value 92.552728
converged
Fitting Repeat 3
# weights: 507
initial value 100.284064
final value 94.484211
converged
Fitting Repeat 4
# weights: 507
initial value 100.664527
final value 93.294118
converged
Fitting Repeat 5
# weights: 507
initial value 102.335964
iter 10 value 86.027289
iter 20 value 82.170433
final value 82.169463
converged
Fitting Repeat 1
# weights: 103
initial value 97.171514
iter 10 value 92.936428
iter 20 value 86.002278
iter 30 value 83.551719
iter 40 value 82.051686
iter 50 value 81.973627
iter 60 value 81.405318
iter 70 value 80.911544
final value 80.910675
converged
Fitting Repeat 2
# weights: 103
initial value 96.496665
iter 10 value 94.425858
iter 20 value 93.375185
iter 30 value 92.732919
iter 40 value 92.705192
iter 50 value 85.128299
iter 60 value 84.381894
iter 70 value 84.173921
iter 80 value 83.504716
iter 90 value 82.745149
iter 100 value 81.804129
final value 81.804129
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 97.521603
iter 10 value 92.898001
iter 20 value 90.030641
iter 30 value 89.598168
iter 40 value 86.201271
iter 50 value 83.216432
iter 60 value 82.123832
iter 70 value 81.126018
iter 80 value 80.912102
iter 90 value 80.910707
final value 80.910675
converged
Fitting Repeat 4
# weights: 103
initial value 99.433449
iter 10 value 93.961324
iter 20 value 92.874355
iter 30 value 89.147607
iter 40 value 89.001286
iter 50 value 88.744371
iter 60 value 83.041314
iter 70 value 82.233991
iter 80 value 82.143009
iter 90 value 81.968993
iter 100 value 81.593139
final value 81.593139
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 97.845939
iter 10 value 93.580109
iter 20 value 88.166833
iter 30 value 84.653500
iter 40 value 84.358706
iter 50 value 84.157291
final value 84.153024
converged
Fitting Repeat 1
# weights: 305
initial value 102.292083
iter 10 value 94.474709
iter 20 value 88.965281
iter 30 value 85.182007
iter 40 value 83.376973
iter 50 value 82.856931
iter 60 value 80.653439
iter 70 value 80.143180
iter 80 value 80.061049
iter 90 value 79.965352
iter 100 value 79.888553
final value 79.888553
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 111.978725
iter 10 value 97.921720
iter 20 value 86.325438
iter 30 value 84.510775
iter 40 value 83.505694
iter 50 value 83.157187
iter 60 value 82.958578
iter 70 value 82.844112
iter 80 value 82.763799
iter 90 value 82.652742
iter 100 value 82.597682
final value 82.597682
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 128.867400
iter 10 value 94.440437
iter 20 value 85.791774
iter 30 value 84.921639
iter 40 value 83.450036
iter 50 value 82.970090
iter 60 value 81.841966
iter 70 value 81.370147
iter 80 value 80.596044
iter 90 value 79.803011
iter 100 value 79.557802
final value 79.557802
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 110.027862
iter 10 value 94.501689
iter 20 value 94.153464
iter 30 value 92.536875
iter 40 value 85.053972
iter 50 value 84.483723
iter 60 value 84.233906
iter 70 value 83.302109
iter 80 value 80.668204
iter 90 value 79.685809
iter 100 value 79.604371
final value 79.604371
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 125.402792
iter 10 value 94.457779
iter 20 value 86.210321
iter 30 value 83.533308
iter 40 value 81.347041
iter 50 value 80.406651
iter 60 value 79.767348
iter 70 value 79.598526
iter 80 value 79.595954
iter 90 value 79.580687
iter 100 value 79.416379
final value 79.416379
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 111.059033
iter 10 value 94.555929
iter 20 value 92.554245
iter 30 value 85.274334
iter 40 value 84.195779
iter 50 value 83.552543
iter 60 value 82.905064
iter 70 value 81.883081
iter 80 value 80.870533
iter 90 value 80.238874
iter 100 value 80.157723
final value 80.157723
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 105.979492
iter 10 value 94.484784
iter 20 value 92.800666
iter 30 value 92.592100
iter 40 value 86.989158
iter 50 value 83.425471
iter 60 value 82.611994
iter 70 value 81.747727
iter 80 value 81.368456
iter 90 value 81.109725
iter 100 value 80.433318
final value 80.433318
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 124.215478
iter 10 value 96.323065
iter 20 value 92.829628
iter 30 value 85.660428
iter 40 value 83.742344
iter 50 value 82.574905
iter 60 value 80.922490
iter 70 value 80.404445
iter 80 value 80.007866
iter 90 value 79.621428
iter 100 value 79.446250
final value 79.446250
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 115.823091
iter 10 value 94.858762
iter 20 value 90.775279
iter 30 value 84.664207
iter 40 value 84.288810
iter 50 value 83.422173
iter 60 value 82.014841
iter 70 value 80.843009
iter 80 value 80.435305
iter 90 value 79.990959
iter 100 value 79.910312
final value 79.910312
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 117.298934
iter 10 value 94.579737
iter 20 value 93.035446
iter 30 value 84.446500
iter 40 value 84.197585
iter 50 value 83.895267
iter 60 value 82.834938
iter 70 value 81.545304
iter 80 value 79.911194
iter 90 value 79.304534
iter 100 value 79.131910
final value 79.131910
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 102.166506
final value 94.486137
converged
Fitting Repeat 2
# weights: 103
initial value 97.994871
iter 10 value 90.775518
iter 20 value 88.850019
iter 30 value 88.567530
iter 40 value 85.604403
iter 50 value 84.507268
iter 60 value 84.480268
final value 84.480219
converged
Fitting Repeat 3
# weights: 103
initial value 102.716205
final value 94.485598
converged
Fitting Repeat 4
# weights: 103
initial value 108.182776
final value 93.811288
converged
Fitting Repeat 5
# weights: 103
initial value 106.477544
final value 94.486007
converged
Fitting Repeat 1
# weights: 305
initial value 98.513074
iter 10 value 94.489578
final value 94.485883
converged
Fitting Repeat 2
# weights: 305
initial value 101.649624
iter 10 value 94.488859
iter 20 value 94.484471
final value 94.484281
converged
Fitting Repeat 3
# weights: 305
initial value 99.652979
iter 10 value 94.031733
iter 20 value 94.028706
final value 94.028181
converged
Fitting Repeat 4
# weights: 305
initial value 99.520842
iter 10 value 94.492275
iter 20 value 94.305435
iter 30 value 87.086891
iter 40 value 86.110250
iter 50 value 86.102628
iter 60 value 85.761809
iter 70 value 85.061198
iter 80 value 85.058805
final value 85.058619
converged
Fitting Repeat 5
# weights: 305
initial value 114.661102
iter 10 value 94.489023
iter 20 value 94.484239
iter 30 value 92.348868
iter 40 value 88.815729
iter 50 value 88.721426
iter 60 value 87.355347
iter 70 value 83.130756
iter 80 value 81.824952
iter 90 value 81.650835
iter 100 value 81.563019
final value 81.563019
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 96.341400
iter 10 value 94.485611
iter 20 value 92.894722
final value 92.553738
converged
Fitting Repeat 2
# weights: 507
initial value 103.459239
iter 10 value 94.034441
iter 20 value 92.612554
iter 30 value 92.552577
iter 40 value 92.147009
iter 50 value 87.833114
iter 60 value 81.358104
iter 70 value 79.922615
iter 80 value 79.901656
iter 90 value 79.856231
iter 100 value 78.816349
final value 78.816349
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 113.168472
iter 10 value 94.492545
iter 20 value 94.484024
iter 30 value 89.325710
iter 40 value 84.507687
iter 50 value 81.135421
iter 60 value 79.607194
iter 70 value 79.552684
iter 80 value 79.528957
iter 90 value 78.818913
iter 100 value 78.723931
final value 78.723931
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 109.274835
iter 10 value 93.817370
iter 20 value 93.810740
iter 30 value 93.569167
iter 40 value 92.518829
final value 92.512086
converged
Fitting Repeat 5
# weights: 507
initial value 101.264467
iter 10 value 94.492490
iter 20 value 94.387156
iter 30 value 92.553040
iter 40 value 87.626926
iter 50 value 83.026806
iter 60 value 82.421000
iter 70 value 81.962063
iter 80 value 81.565675
iter 90 value 81.554330
iter 100 value 81.553676
final value 81.553676
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 111.488097
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 99.521752
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 98.382358
iter 10 value 93.720946
iter 20 value 93.720867
final value 93.720829
converged
Fitting Repeat 4
# weights: 103
initial value 107.121139
final value 94.484211
converged
Fitting Repeat 5
# weights: 103
initial value 99.365532
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 94.918817
final value 94.354396
converged
Fitting Repeat 2
# weights: 305
initial value 107.975089
final value 94.484211
converged
Fitting Repeat 3
# weights: 305
initial value 97.156213
final value 94.484211
converged
Fitting Repeat 4
# weights: 305
initial value 95.113573
final value 94.484211
converged
Fitting Repeat 5
# weights: 305
initial value 110.128675
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 98.128759
iter 10 value 94.480060
iter 20 value 94.381462
iter 20 value 94.381462
iter 20 value 94.381462
final value 94.381462
converged
Fitting Repeat 2
# weights: 507
initial value 112.668185
iter 10 value 94.609264
final value 94.484211
converged
Fitting Repeat 3
# weights: 507
initial value 128.329041
final value 94.484211
converged
Fitting Repeat 4
# weights: 507
initial value 113.748723
final value 94.484211
converged
Fitting Repeat 5
# weights: 507
initial value 94.917571
iter 10 value 94.354396
iter 10 value 94.354396
iter 10 value 94.354396
final value 94.354396
converged
Fitting Repeat 1
# weights: 103
initial value 113.265216
iter 10 value 94.486543
iter 20 value 94.484180
iter 30 value 94.202691
iter 40 value 90.778943
iter 50 value 88.046157
iter 60 value 87.132932
iter 70 value 84.813870
iter 80 value 84.773208
iter 90 value 84.765955
iter 100 value 84.127138
final value 84.127138
stopped after 100 iterations
Fitting Repeat 2
# weights: 103
initial value 97.605801
iter 10 value 94.214552
iter 20 value 94.187075
iter 30 value 93.788674
iter 40 value 93.327518
iter 50 value 93.296564
iter 60 value 92.900674
iter 70 value 92.614071
iter 80 value 92.594238
final value 92.594202
converged
Fitting Repeat 3
# weights: 103
initial value 99.703719
iter 10 value 94.469194
iter 20 value 93.567625
iter 30 value 91.848438
iter 40 value 90.271908
iter 50 value 87.135084
iter 60 value 85.813625
iter 70 value 85.273347
iter 80 value 84.420409
iter 90 value 83.717639
iter 100 value 83.701072
final value 83.701072
stopped after 100 iterations
Fitting Repeat 4
# weights: 103
initial value 101.693391
iter 10 value 94.493870
iter 20 value 94.473301
iter 30 value 90.206263
iter 40 value 87.716205
iter 50 value 85.583543
iter 60 value 84.577874
iter 70 value 84.249533
iter 80 value 84.154168
iter 90 value 83.533340
final value 83.523669
converged
Fitting Repeat 5
# weights: 103
initial value 98.795057
iter 10 value 94.483783
iter 20 value 88.703630
iter 30 value 86.319718
iter 40 value 85.287611
iter 50 value 85.219464
final value 85.219442
converged
Fitting Repeat 1
# weights: 305
initial value 132.593140
iter 10 value 94.860640
iter 20 value 91.771906
iter 30 value 89.071804
iter 40 value 88.340954
iter 50 value 87.695667
iter 60 value 85.979064
iter 70 value 84.335168
iter 80 value 83.955855
iter 90 value 83.859472
iter 100 value 83.415139
final value 83.415139
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 106.603893
iter 10 value 94.318388
iter 20 value 86.833029
iter 30 value 85.934107
iter 40 value 85.198610
iter 50 value 84.811875
iter 60 value 84.376100
iter 70 value 84.082112
iter 80 value 83.558642
iter 90 value 83.478531
iter 100 value 83.364831
final value 83.364831
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 101.046911
iter 10 value 93.576418
iter 20 value 86.107241
iter 30 value 85.210937
iter 40 value 84.392266
iter 50 value 84.059973
iter 60 value 82.975738
iter 70 value 82.536579
iter 80 value 82.409365
iter 90 value 82.272663
iter 100 value 82.081128
final value 82.081128
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 112.427344
iter 10 value 94.618080
iter 20 value 88.249014
iter 30 value 86.565542
iter 40 value 86.262762
iter 50 value 84.645513
iter 60 value 83.793748
iter 70 value 83.573163
iter 80 value 83.280999
iter 90 value 83.235074
iter 100 value 83.218781
final value 83.218781
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 105.870725
iter 10 value 93.761042
iter 20 value 86.572445
iter 30 value 86.331474
iter 40 value 85.258513
iter 50 value 84.728100
iter 60 value 84.389241
iter 70 value 84.145267
iter 80 value 83.245225
iter 90 value 82.508931
iter 100 value 82.404803
final value 82.404803
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 123.884780
iter 10 value 91.877226
iter 20 value 86.540768
iter 30 value 86.362594
iter 40 value 85.278070
iter 50 value 84.614554
iter 60 value 83.573696
iter 70 value 83.232843
iter 80 value 83.001984
iter 90 value 82.677453
iter 100 value 82.304168
final value 82.304168
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 109.249267
iter 10 value 94.507696
iter 20 value 93.302994
iter 30 value 86.983272
iter 40 value 86.635884
iter 50 value 84.826417
iter 60 value 82.888227
iter 70 value 82.187348
iter 80 value 82.067398
iter 90 value 81.923557
iter 100 value 81.769432
final value 81.769432
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 113.283868
iter 10 value 94.491413
iter 20 value 92.924991
iter 30 value 88.966559
iter 40 value 87.235485
iter 50 value 87.101933
iter 60 value 86.869636
iter 70 value 85.877931
iter 80 value 84.516823
iter 90 value 83.513046
iter 100 value 82.649372
final value 82.649372
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 106.190346
iter 10 value 94.212064
iter 20 value 88.449212
iter 30 value 85.760303
iter 40 value 85.013706
iter 50 value 84.500366
iter 60 value 84.459088
iter 70 value 84.426143
iter 80 value 84.101276
iter 90 value 82.798944
iter 100 value 82.407330
final value 82.407330
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 123.652583
iter 10 value 95.784025
iter 20 value 87.189992
iter 30 value 86.665872
iter 40 value 85.035986
iter 50 value 83.570177
iter 60 value 82.726831
iter 70 value 82.412005
iter 80 value 82.284692
iter 90 value 82.203658
iter 100 value 82.027836
final value 82.027836
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 102.167093
final value 94.485862
converged
Fitting Repeat 2
# weights: 103
initial value 99.692605
iter 10 value 94.485852
iter 20 value 94.254465
iter 30 value 86.623603
iter 40 value 85.933881
final value 85.933664
converged
Fitting Repeat 3
# weights: 103
initial value 98.528186
iter 10 value 94.486288
iter 20 value 94.484837
iter 20 value 94.484837
iter 20 value 94.484837
final value 94.484837
converged
Fitting Repeat 4
# weights: 103
initial value 100.220876
final value 94.485767
converged
Fitting Repeat 5
# weights: 103
initial value 104.783652
final value 94.486074
converged
Fitting Repeat 1
# weights: 305
initial value 100.932278
iter 10 value 94.488217
iter 20 value 94.484238
final value 94.484225
converged
Fitting Repeat 2
# weights: 305
initial value 97.988512
iter 10 value 94.484724
iter 20 value 94.484469
final value 94.484455
converged
Fitting Repeat 3
# weights: 305
initial value 96.956808
iter 10 value 94.489181
iter 20 value 94.294262
iter 30 value 87.981066
iter 40 value 87.101758
iter 50 value 87.038002
iter 60 value 86.915226
iter 70 value 86.498113
iter 80 value 86.496534
iter 80 value 86.496533
iter 80 value 86.496533
final value 86.496533
converged
Fitting Repeat 4
# weights: 305
initial value 99.832640
iter 10 value 94.368786
iter 20 value 94.358558
iter 30 value 94.147569
iter 40 value 94.144682
iter 50 value 94.144185
final value 94.142682
converged
Fitting Repeat 5
# weights: 305
initial value 97.888094
iter 10 value 94.149310
iter 20 value 94.131080
iter 30 value 94.123445
iter 40 value 94.027066
iter 50 value 94.024209
final value 94.012007
converged
Fitting Repeat 1
# weights: 507
initial value 120.014858
iter 10 value 94.492082
iter 20 value 94.457596
iter 30 value 88.074722
iter 40 value 87.821063
iter 50 value 87.541834
iter 60 value 87.374612
iter 70 value 87.374291
iter 70 value 87.374291
iter 70 value 87.374291
final value 87.374291
converged
Fitting Repeat 2
# weights: 507
initial value 108.726668
iter 10 value 94.487575
iter 20 value 87.980039
iter 30 value 86.494428
iter 40 value 83.136333
iter 50 value 82.933031
iter 60 value 82.915268
iter 60 value 82.915268
final value 82.915268
converged
Fitting Repeat 3
# weights: 507
initial value 118.500554
iter 10 value 94.415223
iter 20 value 86.808596
iter 30 value 84.558849
iter 40 value 84.484172
iter 50 value 84.427128
iter 60 value 84.420009
iter 70 value 84.418429
iter 80 value 84.417151
iter 80 value 84.417151
iter 80 value 84.417151
final value 84.417151
converged
Fitting Repeat 4
# weights: 507
initial value 111.336501
iter 10 value 94.492375
iter 20 value 94.443033
iter 30 value 87.075655
iter 40 value 86.633552
iter 50 value 86.535763
iter 60 value 85.861392
iter 70 value 85.855254
iter 80 value 85.805405
iter 90 value 83.316347
iter 100 value 82.976381
final value 82.976381
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 98.989749
iter 10 value 94.492397
iter 20 value 94.485160
iter 30 value 93.496237
iter 40 value 87.334639
final value 87.334195
converged
Fitting Repeat 1
# weights: 103
initial value 127.579065
iter 10 value 118.016142
iter 20 value 117.893396
iter 30 value 116.308189
iter 40 value 111.942032
iter 50 value 109.475503
iter 60 value 108.744179
iter 70 value 105.290153
iter 80 value 105.258441
final value 105.258333
converged
Fitting Repeat 2
# weights: 103
initial value 120.991189
iter 10 value 116.672690
iter 20 value 109.598349
iter 30 value 108.695734
iter 40 value 107.485474
iter 50 value 105.320524
iter 60 value 105.261872
iter 70 value 105.258585
final value 105.258336
converged
Fitting Repeat 3
# weights: 103
initial value 132.265720
iter 10 value 117.436659
iter 20 value 111.532281
iter 30 value 110.639966
iter 40 value 109.979294
iter 50 value 105.844561
iter 60 value 105.372885
iter 70 value 105.259424
final value 105.258333
converged
Fitting Repeat 4
# weights: 103
initial value 122.197265
iter 10 value 116.635003
iter 20 value 112.459970
iter 30 value 107.913438
iter 40 value 106.184709
iter 50 value 105.753781
iter 60 value 105.589883
iter 70 value 105.098219
iter 80 value 104.812565
iter 90 value 104.777171
iter 100 value 104.775472
final value 104.775472
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 122.430202
iter 10 value 117.892767
iter 20 value 117.813159
iter 30 value 112.581632
iter 40 value 105.161484
iter 50 value 103.131610
iter 60 value 102.670566
iter 70 value 102.326843
iter 80 value 102.325293
iter 80 value 102.325293
iter 80 value 102.325293
final value 102.325293
converged
svmRadial
ranger
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
RUNIT TEST PROTOCOL -- Sun Apr 19 20:16:23 2026
***********************************************
Number of test functions: 7
Number of errors: 0
Number of failures: 0
1 Test Suite :
HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures
Number of test functions: 7
Number of errors: 0
Number of failures: 0
Warning messages:
1: `repeats` has no meaning for this resampling method.
2: executing %dopar% sequentially: no parallel backend registered
>
>
>
>
> proc.time()
user system elapsed
19.379 0.683 85.046
HPiP.Rcheck/HPiP-Ex.timings
| name | user | system | elapsed | |
| FSmethod | 17.082 | 0.085 | 17.418 | |
| FreqInteractors | 0.153 | 0.006 | 0.159 | |
| calculateAAC | 0.013 | 0.001 | 0.013 | |
| calculateAutocor | 0.130 | 0.007 | 0.139 | |
| calculateCTDC | 0.026 | 0.001 | 0.027 | |
| calculateCTDD | 0.164 | 0.011 | 0.175 | |
| calculateCTDT | 0.056 | 0.002 | 0.058 | |
| calculateCTriad | 0.150 | 0.007 | 0.158 | |
| calculateDC | 0.030 | 0.003 | 0.034 | |
| calculateF | 0.101 | 0.001 | 0.103 | |
| calculateKSAAP | 0.038 | 0.002 | 0.041 | |
| calculateQD_Sm | 0.695 | 0.026 | 0.723 | |
| calculateTC | 0.565 | 0.058 | 0.624 | |
| calculateTC_Sm | 0.106 | 0.009 | 0.116 | |
| corr_plot | 17.197 | 0.099 | 17.330 | |
| enrichfindP | 0.205 | 0.043 | 10.816 | |
| enrichfind_hp | 0.017 | 0.003 | 1.930 | |
| enrichplot | 0.163 | 0.003 | 0.165 | |
| filter_missing_values | 0 | 0 | 0 | |
| getFASTA | 0.031 | 0.007 | 3.519 | |
| getHPI | 0.001 | 0.001 | 0.001 | |
| get_negativePPI | 0.000 | 0.000 | 0.001 | |
| get_positivePPI | 0 | 0 | 0 | |
| impute_missing_data | 0.000 | 0.000 | 0.001 | |
| plotPPI | 0.031 | 0.002 | 0.032 | |
| pred_ensembel | 6.420 | 0.195 | 5.878 | |
| var_imp | 17.038 | 0.157 | 17.360 | |