Multiple platform build/check report for BioC 3.21 - BUILD results for BulkSignalR on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	4661
palomino7	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences"	4457
lconway	macOS 12.7.1 Monterey	x86_64	R Under development (unstable) (2025-01-22 r87618) -- "Unsuffered Consequences"	4468
kjohnson3	macOS 13.7.1 Ventura	arm64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	4421
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences"	4411
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for BulkSignalR on kunpeng2

To the developers/maintainers of the BulkSignalR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BulkSignalR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: BulkSignalR

Version: 0.99.22

Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data BulkSignalR

StartedAt: 2025-01-28 21:29:06 -0000 (Tue, 28 Jan 2025)

EndedAt: 2025-01-28 21:32:18 -0000 (Tue, 28 Jan 2025)

EllapsedTime: 192.1 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data BulkSignalR
###
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* checking for file ‘BulkSignalR/DESCRIPTION’ ... OK
* preparing ‘BulkSignalR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BulkSignalR-Differential.Rmd’ using rmarkdown
[WARNING] This document format requires a nonempty <title> element.
  Defaulting to 'BulkSignalR-Differential.knit' as the title.
  To specify a title, use 'title' in metadata or --metadata title="...".
--- finished re-building ‘BulkSignalR-Differential.Rmd’

--- re-building ‘BulkSignalR-Main.Rmd’ using rmarkdown

Quitting from lines 551-583 [mouse] (BulkSignalR-Main.Rmd)
Error: processing vignette 'BulkSignalR-Main.Rmd' failed with diagnostics:
There's an issue with your request to g:Profiler.
Error code: 301.
Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
--- failed re-building ‘BulkSignalR-Main.Rmd’

SUMMARY: processing the following file failed:
  ‘BulkSignalR-Main.Rmd’

Error: Vignette re-building failed.
Execution halted