| Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-02 09:00:48 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the RProtoBufLib package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1706/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| RProtoBufLib 2.11.0 (landing page) Mike Jiang
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
| Package: RProtoBufLib |
| Version: 2.11.0 |
| Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL RProtoBufLib |
| StartedAt: 2022-12-28 15:26:16 -0500 (Wed, 28 Dec 2022) |
| EndedAt: 2022-12-28 15:26:45 -0500 (Wed, 28 Dec 2022) |
| EllapsedTime: 28.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL RProtoBufLib
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* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'RProtoBufLib' ...
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
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** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
using C++11
"F:/biocbuild/bbs-3.17-bioc/R/bin/x64/Rscript.exe" "../tools/downloadlibs.R" 3.8.0
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.8.0/include -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c GatingSet_pb_lib/GatingSet.pb.cc -o GatingSet_pb_lib/GatingSet.pb.o
mkdir -p "F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
cp -r ../windows/protobuf-3.8.0/include/google "F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
mkdir -p "F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64"
cp ../windows/protobuf-3.8.0/lib/x64-ucrt/libprotobuf.a "F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64/libprotobuf.a"
cp GatingSet_pb_lib/GatingSet.pb.o "F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64/GatingSet.pb.o"
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.8.0/include -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dummy.cpp -o dummy.o
g++ -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RProtoBufLib)