| Back to Multiple platform build/check report for BioC 3.16 |
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This page was generated on 2022-07-07 11:12:13 -0400 (Thu, 07 Jul 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" | 4343 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" | 4148 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4160 |
| kjohnson | macOS 12.4 Monterey | arm64 | 4.2.0 Patched (2022-06-09 r82473) -- "Vigorous Calisthenics" | 3115 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the zlibbioc package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/zlibbioc.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2124/2124 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| zlibbioc 1.43.0 (landing page) Bioconductor Package Maintainer
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson | macOS 12.4 Monterey / arm64 | OK | OK | NA | ERROR | |||||||||
| Package: zlibbioc |
| Version: 1.43.0 |
| Command: rm -rf zlibbioc.buildbin-libdir && mkdir zlibbioc.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh zlibbioc_1.43.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R zlibbioc.buildbin-libdir |
| StartedAt: 2022-07-07 09:26:21 -0400 (Thu, 07 Jul 2022) |
| EndedAt: 2022-07-07 09:26:25 -0400 (Thu, 07 Jul 2022) |
| EllapsedTime: 4.7 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf zlibbioc.buildbin-libdir && mkdir zlibbioc.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh zlibbioc_1.43.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R zlibbioc.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=zlibbioc.buildbin-libdir zlibbioc_1.43.0.tar.gz' >>>>>>> * installing *source* package ‘zlibbioc’ ... ** using staged installation configure: creating ./config.status config.status: creating src/Makevars ** libs mkdir -p "/Users/biocbuild/bbs-3.16-bioc/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/include" clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c R_init_zlibbioc.c -o R_init_zlibbioc.o clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o zlibbioc.so R_init_zlibbioc.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.16-bioc/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zlibbioc) >>>>>>> >>>>>>> FIXING LINKS FOR zlibbioc.buildbin-libdir/zlibbioc/libs/zlibbioc.so >>>>>>> ERROR: R installation problem: File /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgcc_s.1.dylib not found!