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This page was generated on 2022-07-07 11:11:20 -0400 (Thu, 07 Jul 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" 4343
palomino4Windows Server 2022 Datacenterx644.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" 4148
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4160
kjohnsonmacOS 12.4 Montereyarm644.2.0 Patched (2022-06-09 r82473) -- "Vigorous Calisthenics" 3115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for inveRsion on kjohnson


To the developers/maintainers of the inveRsion package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/inveRsion.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 963/2124HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
inveRsion 1.45.1  (landing page)
Alejandro Caceres
Snapshot Date: 2022-07-06 14:00:06 -0400 (Wed, 06 Jul 2022)
git_url: https://git.bioconductor.org/packages/inveRsion
git_branch: master
git_last_commit: 3dc631e
git_last_commit_date: 2022-05-10 11:53:30 -0400 (Tue, 10 May 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.2.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnsonmacOS 12.4 Monterey / arm64  ERROR    ERROR  skippedskipped

Summary

Package: inveRsion
Version: 1.45.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data inveRsion
StartedAt: 2022-07-06 23:03:36 -0400 (Wed, 06 Jul 2022)
EndedAt: 2022-07-06 23:03:56 -0400 (Wed, 06 Jul 2022)
EllapsedTime: 19.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data inveRsion
###
##############################################################################
##############################################################################


* checking for file ‘inveRsion/DESCRIPTION’ ... OK
* preparing ‘inveRsion’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘inveRsion.Rnw’ using Sweave
Loading required package: haplo.stats
Loading required package: arsenal


Hola!

welcome to inevRsion package. 
 
 

type: manual() for full manual 
      vignette("inveRsion") for a quick start 

Warning: Package 'inveRsion' is deprecated and will be removed from Bioconductor
  version 3.17
-Code haplotypes-
  reading data from haplotype file:
  /private/tmp/Rtmp1vYItK/Rinste8a057b1800d/inveRsion/extdata/haplotypesROI.txt 

  preparing data
  Number of brakepoints: 248

Error: processing vignette 'inveRsion.Rnw' failed with diagnostics:
 chunk 3 
Error in lociPos[lociSel]/10^6 : non-numeric argument to binary operator

--- failed re-building ‘inveRsion.Rnw’

SUMMARY: processing the following file failed:
  ‘inveRsion.Rnw’

Error: Vignette re-building failed.
Execution halted