Multiple platform build/check report for BioC 3.16 - BUILD results for igvR on kjohnson

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This page was generated on 2022-07-07 11:11:18 -0400 (Thu, 07 Jul 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics"	4343
palomino4	Windows Server 2022 Datacenter	x64	4.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics"	4148
lconway	macOS 12.2.1 Monterey	x86_64	4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics"	4160
kjohnson	macOS 12.4 Monterey	arm64	4.2.0 Patched (2022-06-09 r82473) -- "Vigorous Calisthenics"	3115
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for igvR on kjohnson

To the developers/maintainers of the igvR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igvR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

igvR 1.17.6 (landing page)
Paul Shannon

Snapshot Date: 2022-07-06 14:00:06 -0400 (Wed, 06 Jul 2022)

git_url: https://git.bioconductor.org/packages/igvR

git_branch: master

git_last_commit: dc4331f

git_last_commit_date: 2022-06-12 00:32:35 -0400 (Sun, 12 Jun 2022)

nebbiolo2

Linux (Ubuntu 20.04.4 LTS) / x86_64

ERROR

palomino4

Windows Server 2022 Datacenter / x64

ERROR

lconway

macOS 12.2.1 Monterey / x86_64

ERROR

kjohnson

macOS 12.4 Monterey / arm64

ERROR

skipped

Summary

Package: igvR

Version: 1.17.6

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data igvR

StartedAt: 2022-07-06 22:51:04 -0400 (Wed, 06 Jul 2022)

EndedAt: 2022-07-06 22:51:06 -0400 (Wed, 06 Jul 2022)

EllapsedTime: 1.2 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data igvR
###
##############################################################################
##############################################################################


* checking for file ‘igvR/DESCRIPTION’ ... OK
* preparing ‘igvR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘MotifDb’, ‘rtracklayer’, ‘VariantAnnotation’ are not available for package ‘igvR’
* removing ‘/private/tmp/Rtmpy6hqFW/Rinstda92682a3069/igvR’
      -----------------------------------
ERROR: package installation failed