Multiple platform build/check report for BioC 3.16 - BUILD results for bsseq on kjohnson

Back to Multiple platform build/check report for BioC 3.16

[B]

This page was generated on 2022-07-11 11:06:41 -0400 (Mon, 11 Jul 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.2.1 (2022-06-23) -- "Funny-Looking Kid"	4148
lconway	macOS 12.2.1 Monterey	x86_64	4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics"	4168
kjohnson	macOS 12.4 Monterey	arm64	4.2.1 (2022-06-23) -- "Funny-Looking Kid"	3545
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for bsseq on kjohnson

To the developers/maintainers of the bsseq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bsseq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

bsseq 1.33.0 (landing page)
Kasper Daniel Hansen

Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022)

git_url: https://git.bioconductor.org/packages/bsseq

git_branch: master

git_last_commit: 67c93e4

git_last_commit_date: 2022-04-26 11:11:30 -0400 (Tue, 26 Apr 2022)

nebbiolo2

Linux (Ubuntu 20.04.4 LTS) / x86_64

lconway

macOS 12.2.1 Monterey / x86_64

kjohnson

macOS 12.4 Monterey / arm64

ERROR

skipped

Summary

Package: bsseq

Version: 1.33.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data bsseq

StartedAt: 2022-07-11 04:21:05 -0400 (Mon, 11 Jul 2022)

EndedAt: 2022-07-11 04:21:15 -0400 (Mon, 11 Jul 2022)

EllapsedTime: 10.3 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data bsseq
###
##############################################################################
##############################################################################


* checking for file ‘bsseq/DESCRIPTION’ ... OK
* preparing ‘bsseq’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
ERROR: dependency ‘BSgenome’ is not available for package ‘bsseq’
* removing ‘/private/tmp/RtmpCy0RoU/Rinst10e464459146a/bsseq’
      -----------------------------------
ERROR: package installation failed