| Back to Multiple platform build/check report for BioC 3.16 |
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This page was generated on 2022-07-11 11:06:58 -0400 (Mon, 11 Jul 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4148 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4168 |
| kjohnson | macOS 12.4 Monterey | arm64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 3545 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the SynExtend package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SynExtend.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1962/2130 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SynExtend 1.9.1 (landing page) Nicholas Cooley
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | ERROR | OK | ERROR | |||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | ERROR | OK | ERROR | OK | |||||||||
| kjohnson | macOS 12.4 Monterey / arm64 | ERROR | NA | NA | NA | |||||||||
| Package: SynExtend |
| Version: 1.9.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SynExtend |
| StartedAt: 2022-07-10 15:42:36 -0400 (Sun, 10 Jul 2022) |
| EndedAt: 2022-07-10 15:43:00 -0400 (Sun, 10 Jul 2022) |
| EllapsedTime: 24.0 seconds |
| RetCode: 1 |
| Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SynExtend ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’ * installing *source* package ‘SynExtend’ ... ** using staged installation ** libs make: Nothing to be done for `all'. installing to /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-SynExtend/00new/SynExtend/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘SynExtend’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-SynExtend/00new/SynExtend/libs/SynExtend.so': dlopen(/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-SynExtend/00new/SynExtend/libs/SynExtend.so, 0x0006): Library not loaded: /opt/homebrew/opt/libomp/lib/libomp.dylib Referenced from: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-SynExtend/00new/SynExtend/libs/SynExtend.so Reason: tried: '/opt/homebrew/opt/libomp/lib/libomp.dylib' (no such file), '/Library/Frameworks/R.framework/Resources/lib/libomp.dylib' (no such file), '/usr/local/openjdk-18.0.1.1.jdk/Contents/Home/lib/server/libomp.dylib' (no such file) Error: loading failed Execution halted ERROR: loading failed * removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/SynExtend’