This page was generated on 2023-04-12 11:06:11 -0400 (Wed, 12 Apr 2023).
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL IgGeneUsage
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘IgGeneUsage’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -D_HAS_AUTO_PTR_ETC=0 -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include' -I/usr/local/include -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Core:540:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:2:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/LU:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Jacobi:29:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:15:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Householder:27:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:5:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SVD:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Geometry:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Eigenvalues:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:26:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCore:66:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:27:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/OrderingMethods:71:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:29:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseQR:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:33:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/CholmodSupport:45:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:39:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:40:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
18 warnings generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -D_HAS_AUTO_PTR_ETC=0 -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include' -I/usr/local/include -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -Wall -g -O2 -c stanExports_zibb.cc -o stanExports_zibb.o
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Core:540:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:2:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/LU:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Jacobi:29:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:15:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Householder:27:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:5:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SVD:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Geometry:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Eigenvalues:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:26:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCore:66:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:27:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/OrderingMethods:71:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:29:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseQR:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:33:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/CholmodSupport:45:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:39:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:40:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
#pragma clang diagnostic pop
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:38:38: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>' requested here
|| (cholesky.vectorD().array() <= 0.0).any()) {
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_pos_semidefinite.hpp:44:38: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>' requested here
|| (cholesky.vectorD().array() < 0.0).any()) {
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/matrix_exp_action_handler.hpp:70:19: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>' requested here
B = t * A * B / (s * j);
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/matrix_exp_action_handler.hpp:70:27: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>' requested here
B = t * A * B / (s * j);
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/welford_covar_estimator.hpp:26:29: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>' requested here
Eigen::VectorXd delta(q - m_);
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:44:53: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
Eigen::VectorXd stddev = S_ldlt.vectorD().array().sqrt().matrix();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:52:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>' requested here
= mu + (S_ldlt.transpositionsP().transpose() * (S_ldlt.matrixL() * z));
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:283:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable]
int n = G.rows(); // number of states
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/matrix_normal_prec_rng.hpp:98:38: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
= Sigma_ldlt.vectorD().array().inverse().sqrt().matrix();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:29: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>' requested here
= (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:48: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>' requested here
= (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:55: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>' requested here
= (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:61: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' requested here
= (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:133:18: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>' requested here
logp = y_vec.cwiseEqual(1)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:44:16: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>' requested here
return vd1.val().dot(vd2.val());
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:67:9: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>' requested here
vd1.adj() += adj_ * vd2.val();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:84:54: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>' requested here
= Eigen::Map<const vector_v>(inv, length_).vi();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:96:45: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>' requested here
= Eigen::Ref<const vector_v>(inv).vi();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:17:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion]
inline static double square(double x) { return square(x); }
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:44:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>' requested here
return Eigen::Ref<const vector_v>(v).val().squaredNorm();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/determinant.hpp:38:51: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>' requested here
Eigen::Map<matrix_vi>(adjARef_, rows_, cols_).adj()
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/grad.hpp:28:9: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
g = x.adj();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:43:12: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>' requested here
Ad = A.val();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:46:45: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>' requested here
Map<matrix_vi>(vari_ref_A_, M_, M_) = A.vi();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:19: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>' requested here
= A_inv_d.unaryExpr([](double x) { return new vari(x, false); });
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_determinant_ldlt.hpp:35:50: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>' requested here
const_cast<matrix_vi &>(alloc_ldlt_->variA_).adj() += adj_ * invA;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_log_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_log_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_determinant_spd.hpp:38:39: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
double val = ldlt.vectorD().array().log().sum();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_log_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_softmax.hpp:66:57: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
Eigen::Map<vector_vi>(alpha_vi_array, a_size) = alpha.vi();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_softmax.hpp:68:28: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
vector_d alpha_d = alpha.val();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/multiply.hpp:549:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>' requested here
Map<row_vector_vi>(variRefA_, size_).adj()
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/sd.hpp:33:32: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>' requested here
vector_d dtrs_val = dtrs_map.val();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>>' required here
: public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/sum.hpp:21:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>' requested here
return Eigen::Ref<const matrix_v>(v).val().sum();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:70:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable]
const size_t coupled_size = cvodes_data.coupled_ode_.size();
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_square_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_square_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:182:56: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>' requested here
return normal_fullrank(Eigen::VectorXd(mu_.array().square()),
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_square_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1238:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
int ret = stan::services::error_codes::CONFIG;
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:31: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>' requested here
return numext::real((*this).cwiseAbs2().sum());
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:25: note: in instantiation of member function 'Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>::squaredNorm' requested here
if (k>0) x -= A10.squaredNorm();
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:14: note: in instantiation of function template specialization 'Eigen::internal::llt_inplace<double, 1>::unblocked<Eigen::Matrix<double, -1, -1, 0>>' requested here
return unblocked(m);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:61: note: in instantiation of function template specialization 'Eigen::internal::llt_inplace<double, 1>::blocked<Eigen::Matrix<double, -1, -1, 0>>' requested here
{ return llt_inplace<typename MatrixType::Scalar, Lower>::blocked(m)==-1; }
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:21: note: in instantiation of member function 'Eigen::internal::LLT_Traits<Eigen::Matrix<double, -1, -1, 0>, 1>::inplace_decomposition' requested here
bool ok = Traits::inplace_decomposition(m_matrix);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/cholesky_decompose.hpp:76:7: note: in instantiation of function template specialization 'Eigen::LLT<Eigen::Matrix<double, -1, -1, 0>, 1>::compute<Eigen::Matrix<double, -1, -1, 0>>' requested here
llt.compute(m);
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:23: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>' requested here
return a.template binaryExpr<conj_prod>(b).sum();
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:55: note: in instantiation of member function 'Eigen::internal::dot_nocheck<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, false>::run' requested here
return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/multiply_lower_tri_self_transpose.hpp:35:49: note: in instantiation of function template specialization 'Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>::dot<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>' requested here
LLt(n, m) = LLt(m, n) = Lt.col(m).head(k).dot(Lt.col(n).head(k));
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:381:34: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>' requested here
= lu.col(k).tail(rows-k).unaryExpr(Scoring()).maxCoeff(&row_of_biggest_in_col);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:436:14: note: (skipping 9 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
return unblocked_lu(lu, row_transpositions, nb_transpositions);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:3: note: in instantiation of function template specialization 'Eigen::internal::call_assignment_no_alias<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::internal::assign_op<double, double>>' requested here
call_assignment_no_alias(dst, src, func);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:3: note: in instantiation of function template specialization 'Eigen::internal::call_assignment<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::internal::assign_op<double, double>>' requested here
call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:13: note: in instantiation of function template specialization 'Eigen::internal::call_assignment<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
internal::call_assignment(derived(), other.derived());
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Map.h:162:5: note: in instantiation of function template specialization 'Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>::operator=<Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Map)
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:872:5: note: expanded from macro 'EIGEN_INHERIT_ASSIGNMENT_OPERATORS'
EIGEN_INHERIT_ASSIGNMENT_EQUAL_OPERATOR(Derived) \
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:841:108: note: expanded from macro 'EIGEN_INHERIT_ASSIGNMENT_EQUAL_OPERATOR'
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& operator=(const DenseBase<OtherDerived>& other) { Base::operator=(other.derived()); return *this; }
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:44:13: note: in instantiation of function template specialization 'Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>::operator=<Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
A_inv_d = Ad.inverse();
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:144:30: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
return !((derived().array()==derived().array()).all());
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:158:34: note: in instantiation of member function 'Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>::hasNaN' requested here
return !((derived()-derived()).hasNaN());
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_finite.hpp:30:22: note: in instantiation of member function 'Eigen::DenseBase<Eigen::Matrix<double, -1, 1, 0>>::allFinite' requested here
if (!value_of(y).allFinite()) {
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/scal/err/check_finite.hpp:47:54: note: in instantiation of member function 'stan::math::internal::finite<Eigen::Matrix<double, -1, 1, 0>, true>::check' requested here
internal::finite<T_y, is_vector_like<T_y>::value>::check(function, name, y);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/validate_diag_inv_metric.hpp:21:17: note: in instantiation of function template specialization 'stan::math::check_finite<Eigen::Matrix<double, -1, 1, 0>>' requested here
stan::math::check_finite("check_finite", "inv_metric", inv_metric);
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:57:14: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>' requested here
return x.unaryExpr(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/inv_logit.hpp:32:48: note: (skipping 3 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
return apply_scalar_unary<inv_logit_fun, T>::apply(x);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:92:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
stan::io::random_var_context random_context(model, rng, init_radius,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
std::vector<double> cont_vector = util::initialize(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
return_code = stan::services::diagnose::diagnose(model,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
ret = command(args, model_, holder, names_oi_tidx_,
^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
.method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/multiply.hpp:585:20: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
return to_var(m) * to_var(c);
^
./stanExports_zibb.h:530:51: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
stan::math::assign(alpha_gene, add(0, multiply(alpha_sigma, alpha_raw)));
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
log_prob = stan::model::log_prob_grad<true, Jacobian>(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
std::vector<double> cont_vector = util::initialize(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
return_code = stan::services::diagnose::diagnose(model,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
ret = command(args, model_, holder, names_oi_tidx_,
^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
.method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/add.hpp:58:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
return c + m.array();
^
./stanExports_zibb.h:530:44: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
stan::math::assign(alpha_gene, add(0, multiply(alpha_sigma, alpha_raw)));
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
log_prob = stan::model::log_prob_grad<true, Jacobian>(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
std::vector<double> cont_vector = util::initialize(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
return_code = stan::services::diagnose::diagnose(model,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
ret = command(args, model_, holder, names_oi_tidx_,
^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
.method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
: public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:57:14: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
return x.unaryExpr(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/inv_logit.hpp:32:48: note: (skipping 3 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
return apply_scalar_unary<inv_logit_fun, T>::apply(x);
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
log_prob = stan::model::log_prob_grad<true, Jacobian>(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
std::vector<double> cont_vector = util::initialize(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
return_code = stan::services::diagnose::diagnose(model,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
ret = command(args, model_, holder, names_oi_tidx_,
^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
.method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
typedef typename std::result_of<T>::type type1;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
typedef typename result_of<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
: public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
public CwiseBinaryOpImpl<
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/subtract.hpp:34:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
return c - m.array();
^
./stanExports_zibb.h:548:29: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
subtract(phi, get_base1(a, i, "a", 1)),
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
log_prob = stan::model::log_prob_grad<true, Jacobian>(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
std::vector<double> cont_vector = util::initialize(
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
return_code = stan::services::diagnose::diagnose(model,
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
ret = command(args, model_, holder, names_oi_tidx_,
^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
.method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
# define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core.hpp:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
static void set_zero_all_adjoints() {
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core.hpp:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints_nested.hpp:17:13: warning: 'static' function 'set_zero_all_adjoints_nested' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints_nested() {
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:278:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:328:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
using T_alpha_val = typename std::conditional_t<
^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
using idx_t = typename index_type<matrix_v>::type;
^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
using idx_t = typename index_type<matrix_d>::type;
^
In file included from stanExports_zibb.cc:5:
./stanExports_zibb.h:266:24: warning: unused typedef 'local_scalar_t__' [-Wunused-local-typedef]
typedef double local_scalar_t__;
^
69 warnings generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o IgGeneUsage.so RcppExports.o stanExports_zibb.o -L/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/ -Wl,-rpath,/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.2/Resources/library/00LOCK-IgGeneUsage/00new/IgGeneUsage/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IgGeneUsage)