Multiple platform build/check report for BioC 3.16 - CHECK results for IgGeneUsage on lconway

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.5 LTS)	x86_64	4.2.3 (2023-03-15) -- "Shortstop Beagle"	4502
palomino4	Windows Server 2022 Datacenter	x64	4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle"	4282
lconway	macOS 12.5.1 Monterey	x86_64	4.2.3 (2023-03-15) -- "Shortstop Beagle"	4310
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

Package: IgGeneUsage

Version: 1.12.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:IgGeneUsage.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings IgGeneUsage_1.12.0.tar.gz

StartedAt: 2023-04-10 20:44:21 -0400 (Mon, 10 Apr 2023)

EndedAt: 2023-04-10 20:58:46 -0400 (Mon, 10 Apr 2023)

EllapsedTime: 864.8 seconds

RetCode: 0

Status: OK

CheckDir: IgGeneUsage.Rcheck

Warnings: 0

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:IgGeneUsage.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings IgGeneUsage_1.12.0.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.16-bioc/meat/IgGeneUsage.Rcheck’
* using R version 4.2.3 (2023-03-15)
* using platform: x86_64-apple-darwin17.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘IgGeneUsage/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘IgGeneUsage’ version ‘1.12.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .travis.yml
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘IgGeneUsage’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
LOO 219.832  1.194 221.736
DGU  41.142  0.689  41.918
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.16-bioc/meat/IgGeneUsage.Rcheck/00check.log’
for details.

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL IgGeneUsage
###
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##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘IgGeneUsage’ ...
** using staged installation
** libs


clang++ -mmacosx-version-min=10.13 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -D_HAS_AUTO_PTR_ETC=0 -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include' -I/usr/local/include   -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Core:540:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:2:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/LU:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Jacobi:29:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:15:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Householder:27:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:5:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SVD:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Geometry:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:30:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Eigenvalues:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:26:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCore:66:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:27:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/OrderingMethods:71:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:29:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseQR:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:33:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/CholmodSupport:45:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:39:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:40:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
18 warnings generated.


clang++ -mmacosx-version-min=10.13 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -D_HAS_AUTO_PTR_ETC=0 -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include' -I/usr/local/include   -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fPIC  -Wall -g -O2  -c stanExports_zibb.cc -o stanExports_zibb.o
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Core:540:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:2:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/LU:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Jacobi:29:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Cholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:15:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Householder:27:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/QR:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:5:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SVD:48:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Geometry:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Eigenvalues:58:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:26:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCore:66:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:27:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/OrderingMethods:71:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:29:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseCholesky:43:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/SparseQR:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Sparse:33:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:32:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/CholmodSupport:45:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:39:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:22:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigen.h:25:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/RcppEigenForward.h:40:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:38:38: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>' requested here
      || (cholesky.vectorD().array() <= 0.0).any()) {
                                     ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LE> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_pos_semidefinite.hpp:44:38: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1, 0>>>' requested here
      || (cholesky.vectorD().array() < 0.0).any()) {
                                     ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_LT> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/matrix_exp_action_handler.hpp:70:19: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>' requested here
            B = t * A * B / (s * j);
                  ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_product_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/matrix_exp_action_handler.hpp:70:27: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double>, const Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 0>>, const Eigen::Matrix<double, -1, -1, 0>>, Eigen::Matrix<double, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1, 0>>>' requested here
            B = t * A * B / (s * j);
                          ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_quotient_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/welford_covar_estimator.hpp:26:29: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>' requested here
    Eigen::VectorXd delta(q - m_);
                            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_difference_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:44:53: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_sqrt_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
  Eigen::VectorXd stddev = S_ldlt.vectorD().array().sqrt().matrix();
                                                    ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sqrt_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:52:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Product<Eigen::Transpose<Eigen::TranspositionsBase<Eigen::Transpositions<-1>>>, Eigen::Product<Eigen::TriangularView<const Eigen::Matrix<double, -1, -1, 0>, 5>, Eigen::Matrix<double, -1, 1, 0>, 0>, 2>>' requested here
      = mu + (S_ldlt.transpositionsP().transpose() * (S_ldlt.matrixL() * z));
           ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sum_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:283:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/matrix_normal_prec_rng.hpp:98:38: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
      = Sigma_ldlt.vectorD().array().inverse().sqrt().matrix();
                                     ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_inverse_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:29: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Array<double, -1, 1, 0>>' requested here
      = (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
                            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_opposite_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:48: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>' requested here
      = (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
                                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_abs_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:55: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>' requested here
      = (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_exp_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:125:61: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_log1p_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Array<double, -1, 1, 0>>>>>' requested here
      = (cut1 > 0.0).select(-cut1, 0) - (-cut1.abs()).exp().log1p();
                                                            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_log1p_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/ordered_logistic_glm_lpmf.hpp:133:18: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ>, const Eigen::Map<const Eigen::Matrix<int, -1, 1, 0>, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1, 0>>>' requested here
    logp = y_vec.cwiseEqual(1)
                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<int, int, Eigen::internal::cmp_EQ> (const int &, const int &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:44:16: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>' requested here
    return vd1.val().dot(vd2.val());
               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::val_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:67:9: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>' requested here
    vd1.adj() += adj_ * vd2.val();
        ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, 1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:84:54: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>' requested here
          = Eigen::Map<const vector_v>(inv, length_).vi();
                                                     ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_product.hpp:96:45: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>' requested here
          = Eigen::Ref<const vector_v>(inv).vi();
                                            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:17:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion]
  inline static double square(double x) { return square(x); }
                                        ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:44:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>' requested here
    return Eigen::Ref<const vector_v>(v).val().squaredNorm();
                                         ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0, Eigen::InnerStride<1>>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/determinant.hpp:38:51: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>' requested here
    Eigen::Map<matrix_vi>(adjARef_, rows_, cols_).adj()
                                                  ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, -1, -1, 0>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/grad.hpp:28:9: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op, Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
  g = x.adj();
        ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::adj_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:43:12: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>' requested here
    Ad = A.val();
           ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:46:45: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, -1, 0>>' requested here
    Map<matrix_vi>(vari_ref_A_, M_, M_) = A.vi();
                                            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, -1, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:19: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29), const Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>' requested here
        = A_inv_d.unaryExpr([](double x) { return new vari(x, false); });
                  ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:48:29) (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_determinant_ldlt.hpp:35:50: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op, Eigen::Matrix<stan::math::vari *, -1, -1, 0>>' requested here
    const_cast<matrix_vi &>(alloc_ldlt_->variA_).adj() += adj_ * invA;
                                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::vari *, -1, -1, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_log_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_log_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_determinant_spd.hpp:38:39: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::ArrayWrapper<Eigen::Diagonal<const Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
  double val = ldlt.vectorD().array().log().sum();
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_log_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_softmax.hpp:66:57: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
  Eigen::Map<vector_vi>(alpha_vi_array, a_size) = alpha.vi();
                                                        ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::vi_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/log_softmax.hpp:68:28: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op, const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
  vector_d alpha_d = alpha.val();
                           ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Matrix<stan::math::var, -1, 1, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/multiply.hpp:549:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op, Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>' requested here
    Map<row_vector_vi>(variRefA_, size_).adj()
                                         ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<stan::math::vari *, 1, -1, 1>, 0>>::adj_Op (stan::math::vari *const &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/sd.hpp:33:32: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op, Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>' requested here
  vector_d dtrs_val = dtrs_map.val();
                               ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<stan::math::var, -1, 1, 0>, 0>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:20:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:479:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:102:22: note: in instantiation of default argument for 'dense_xpr_base<Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>>' required here
  : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryView.h:58:31: note: in instantiation of template class 'Eigen::CwiseUnaryViewImpl<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>, Eigen::Dense>' requested here
class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/sum.hpp:21:42: note: in instantiation of template class 'Eigen::CwiseUnaryView<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op, Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>' requested here
    return Eigen::Ref<const matrix_v>(v).val().sum();
                                         ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<stan::math::var, -1, -1, 0>, 0, Eigen::OuterStride<-1>>>::val_Op (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:70:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable]
    const size_t coupled_size = cvodes_data.coupled_ode_.size();
                 ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_square_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_square_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/variational/families/normal_fullrank.hpp:182:56: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<double>, const Eigen::ArrayWrapper<const Eigen::Matrix<double, -1, 1, 0>>>' requested here
    return normal_fullrank(Eigen::VectorXd(mu_.array().square()),
                                                       ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_square_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1238:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:31: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>' requested here
  return numext::real((*this).cwiseAbs2().sum());
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:25: note: in instantiation of member function 'Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, 1, -1, false>>::squaredNorm' requested here
      if (k>0) x -= A10.squaredNorm();
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:14: note: in instantiation of function template specialization 'Eigen::internal::llt_inplace<double, 1>::unblocked<Eigen::Matrix<double, -1, -1, 0>>' requested here
      return unblocked(m);
             ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:61: note: in instantiation of function template specialization 'Eigen::internal::llt_inplace<double, 1>::blocked<Eigen::Matrix<double, -1, -1, 0>>' requested here
  { return llt_inplace<typename MatrixType::Scalar, Lower>::blocked(m)==-1; }
                                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:21: note: in instantiation of member function 'Eigen::internal::LLT_Traits<Eigen::Matrix<double, -1, -1, 0>, 1>::inplace_decomposition' requested here
  bool ok = Traits::inplace_decomposition(m_matrix);
                    ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/cholesky_decompose.hpp:76:7: note: in instantiation of function template specialization 'Eigen::LLT<Eigen::Matrix<double, -1, -1, 0>, 1>::compute<Eigen::Matrix<double, -1, -1, 0>>' requested here
  llt.compute(m);
      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_abs2_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:23: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>' requested here
    return a.template binaryExpr<conj_prod>(b).sum();
                      ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:55: note: in instantiation of member function 'Eigen::internal::dot_nocheck<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>, false>::run' requested here
  return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
                                                      ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/multiply_lower_tri_self_transpose.hpp:35:49: note: in instantiation of function template specialization 'Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>::dot<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1, 0>, -1, 1, true>, -1, 1, false>>' requested here
      LLt(n, m) = LLt(m, n) = Lt.col(m).head(k).dot(Lt.col(n).head(k));
                                                ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_conj_product_op<double> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:381:34: note: in instantiation of template class 'Eigen::CwiseUnaryOp<Eigen::internal::scalar_score_coeff_op<double>, const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, -1, -1, false>, -1, 1, true>, -1, 1, false>>' requested here
        = lu.col(k).tail(rows-k).unaryExpr(Scoring()).maxCoeff(&row_of_biggest_in_col);
                                 ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:436:14: note: (skipping 9 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
      return unblocked_lu(lu, row_transpositions, nb_transpositions);
             ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:3: note: in instantiation of function template specialization 'Eigen::internal::call_assignment_no_alias<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::internal::assign_op<double, double>>' requested here
  call_assignment_no_alias(dst, src, func);
  ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:3: note: in instantiation of function template specialization 'Eigen::internal::call_assignment<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>, Eigen::internal::assign_op<double, double>>' requested here
  call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
  ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:13: note: in instantiation of function template specialization 'Eigen::internal::call_assignment<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>, Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
  internal::call_assignment(derived(), other.derived());
            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/Map.h:162:5: note: in instantiation of function template specialization 'Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>::operator=<Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
    EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Map)
    ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:872:5: note: expanded from macro 'EIGEN_INHERIT_ASSIGNMENT_OPERATORS'
    EIGEN_INHERIT_ASSIGNMENT_EQUAL_OPERATOR(Derived) \
    ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:841:108: note: expanded from macro 'EIGEN_INHERIT_ASSIGNMENT_EQUAL_OPERATOR'
    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& operator=(const DenseBase<OtherDerived>& other) { Base::operator=(other.derived()); return *this; }
                                                                                                           ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/inverse.hpp:44:13: note: in instantiation of function template specialization 'Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>::operator=<Eigen::Inverse<Eigen::Map<Eigen::Matrix<double, -1, -1, 0>, 0>>>' requested here
    A_inv_d = Ad.inverse();
            ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_score_coeff_op<double> (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:144:30: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>>' requested here
  return !((derived().array()==derived().array()).all());
                             ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:158:34: note: in instantiation of member function 'Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double>, const Eigen::Matrix<double, -1, 1, 0>, const Eigen::Matrix<double, -1, 1, 0>>>::hasNaN' requested here
  return !((derived()-derived()).hasNaN());
                                 ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/err/check_finite.hpp:30:22: note: in instantiation of member function 'Eigen::DenseBase<Eigen::Matrix<double, -1, 1, 0>>::allFinite' requested here
    if (!value_of(y).allFinite()) {
                     ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/scal/err/check_finite.hpp:47:54: note: in instantiation of member function 'stan::math::internal::finite<Eigen::Matrix<double, -1, 1, 0>, true>::check' requested here
  internal::finite<T_y, is_vector_like<T_y>::value>::check(function, name, y);
                                                     ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/validate_diag_inv_metric.hpp:21:17: note: in instantiation of function template specialization 'stan::math::check_finite<Eigen::Matrix<double, -1, 1, 0>>' requested here
    stan::math::check_finite("check_finite", "inv_metric", inv_metric);
                ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_cmp_op<double, double, Eigen::internal::cmp_EQ> (const double &, const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:57:14: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<double, -1, 1, 0>>' requested here
    return x.unaryExpr(
             ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/inv_logit.hpp:32:48: note: (skipping 3 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
  return apply_scalar_unary<inv_logit_fun, T>::apply(x);
                                               ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:92:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const double &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/multiply.hpp:585:20: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
  return to_var(m) * to_var(c);
                   ^
./stanExports_zibb.h:530:51: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
            stan::math::assign(alpha_gene, add(0, multiply(alpha_sigma, alpha_raw)));
                                                  ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_product_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/add.hpp:58:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
  return c + m.array();
           ^
./stanExports_zibb.h:530:44: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
            stan::math::assign(alpha_gene, add(0, multiply(alpha_sigma, alpha_raw)));
                                           ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_sum_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:21:20: note: in instantiation of template class 'Eigen::internal::result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:95:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' required here
  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:29: note: in instantiation of template class 'Eigen::CwiseUnaryOpImpl<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>, Eigen::Dense>' requested here
class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:57:14: note: in instantiation of template class 'Eigen::CwiseUnaryOp<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9), const Eigen::Matrix<stan::math::var, -1, 1, 0>>' requested here
    return x.unaryExpr(
             ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/inv_logit.hpp:32:48: note: (skipping 3 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
  return apply_scalar_unary<inv_logit_fun, T>::apply(x);
                                               ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<(lambda at /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/vectorize/apply_scalar_unary.hpp:58:9) (const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:3:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/Dense:1:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported/Eigen/../../Eigen/Core:367:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/Meta.h:320:25: warning: 'result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' is deprecated [-Wdeprecated-declarations]
  typedef typename std::result_of<T>::type type1;
                        ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:33:20: note: in instantiation of template class 'Eigen::internal::result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' requested here
  typedef typename result_of<
                   ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:497:56: note: in instantiation of template class 'Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' requested here
template<typename Derived, typename XprKind = typename traits<Derived>::XprKind, typename StorageKind = typename traits<Derived>::StorageKind>
                                                       ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:149:22: note: in instantiation of default argument for 'generic_xpr_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>>' required here
  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:78:10: note: in instantiation of template class 'Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>, Eigen::Dense>' requested here
  public CwiseBinaryOpImpl<
         ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/subtract.hpp:34:12: note: in instantiation of template class 'Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<stan::math::var>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<stan::math::var>, const Eigen::Array<stan::math::var, -1, 1, 0>>, const Eigen::ArrayWrapper<const Eigen::Matrix<stan::math::var, -1, 1, 0>>>' requested here
  return c - m.array();
           ^
./stanExports_zibb.h:548:29: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
                            subtract(phi, get_base1(a, i, "a", 1)), 
                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/util/initialize.hpp:165:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_zibb_namespace::model_zibb>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:51:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:467:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_zibb_namespace::model_zibb>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:1201:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stanExports_zibb.cc:15:87: note: in instantiation of member function 'rstan::stan_fit<model_zibb_namespace::model_zibb, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/type_traits:4009:34: note: 'result_of<Eigen::internal::scalar_difference_op<stan::math::var> (const stan::math::var &, const stan::math::var &)>' has been explicitly marked deprecated here
template <class _Callable> class _LIBCPP_DEPRECATED_IN_CXX17 result_of;
                                 ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1066:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/v1/__config:1043:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core.hpp:46:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
static void set_zero_all_adjoints() {
            ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core.hpp:47:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints_nested.hpp:17:13: warning: 'static' function 'set_zero_all_adjoints_nested' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints_nested() {
            ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:278:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat.hpp:328:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stanExports_zibb.cc:5:
In file included from ./stanExports_zibb.h:20:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/rstaninc.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include/rstan/stan_fit.hpp:35:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat.hpp:51:
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_v>::type;
          ^
/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_d>::type;
          ^
In file included from stanExports_zibb.cc:5:
./stanExports_zibb.h:266:24: warning: unused typedef 'local_scalar_t__' [-Wunused-local-typedef]
        typedef double local_scalar_t__;
                       ^
69 warnings generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o IgGeneUsage.so RcppExports.o stanExports_zibb.o -L/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/ -Wl,-rpath,/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.2/Resources/library/00LOCK-IgGeneUsage/00new/IgGeneUsage/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IgGeneUsage)


R version 4.2.3 (2023-03-15) -- "Shortstop Beagle"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin17.0 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(IgGeneUsage)
> 
> test_check("IgGeneUsage")
Tests stan model 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000122 seconds
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Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 6e-05 seconds
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Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 9.7e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 9.1e-05 seconds
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Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 5.8e-05 seconds
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Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 8.1e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 5.9e-05 seconds
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Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 8.3e-05 seconds
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SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 8.8e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 8.7e-05 seconds
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SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 9e-05 seconds
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Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 9e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 6.8e-05 seconds
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Chain 2: 
Chain 2: Gradient evaluation took 8.4e-05 seconds
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SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 5.4e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 5.9e-05 seconds
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Chain 2: Gradient evaluation took 9.1e-05 seconds
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Chain 3: 
Chain 3:  Elapsed Time: 4.28995 seconds (Warm-up)
Chain 3:                13.6858 seconds (Sampling)
Chain 3:                17.9757 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 8.7e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.87 seconds.
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Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 5.5e-05 seconds
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Chain 2:  Elapsed Time: 3.32844 seconds (Warm-up)
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Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 8.3e-05 seconds
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Chain 3:                15.0404 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 5.9e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.59 seconds.
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Chain 1:                17.4379 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 8.5e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.85 seconds.
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Chain 2:  Elapsed Time: 4.3405 seconds (Warm-up)
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Chain 2:                15.6851 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 5.9e-05 seconds
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Chain 3: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 5.8e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.58 seconds.
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Chain 1: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 8.4e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.84 seconds.
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Chain 2: 
Chain 2:  Elapsed Time: 4.67194 seconds (Warm-up)
Chain 2:                27.0658 seconds (Sampling)
Chain 2:                31.7377 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'zibb' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 5.5e-05 seconds
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Chain 3: 
Chain 3:  Elapsed Time: 3.05141 seconds (Warm-up)
Chain 3:                9.48151 seconds (Sampling)
Chain 3:                12.5329 seconds (Total)
Chain 3: 
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ]
> 
> proc.time()
   user  system elapsed 
454.783   2.453 458.474

name	user	system	elapsed
DGU	41.142	0.689	41.918
IGHV_Epitopes	0.002	0.002	0.003
IGHV_HCV	0.004	0.001	0.005
Ig	0.002	0.002	0.003
Ig_SE	0.030	0.002	0.032
LOO	219.832	1.194	221.736
d_zibb	0.002	0.001	0.003

CHECK results for IgGeneUsage on lconway

Summary

Command output

Installation output

Tests output

Example timings