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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Rmmquant_1.8.1.tar.gz && rm -rf Rmmquant.buildbin-libdir && mkdir Rmmquant.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rmmquant.buildbin-libdir Rmmquant_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Rmmquant_1.8.1.zip && rm Rmmquant_1.8.1.tar.gz Rmmquant_1.8.1.zip
###
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100 31168  100 31168    0     0   651k      0 --:--:-- --:--:-- --:--:--  661k

install for i386

* installing *source* package 'Rmmquant' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c mmquant_wrapper.cpp -o mmquant_wrapper.o
In file included from C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp.h:57,
                 from mmquant_wrapper.cpp:1:
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h: In instantiation of 'void Rcpp::DataFrame_Impl<StoragePolicy>::set_type_after_push() [with StoragePolicy = Rcpp::PreserveStorage]':
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h:95:13:   required from 'void Rcpp::DataFrame_Impl<StoragePolicy>::push_back(const T&, const string&) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; StoragePolicy = Rcpp::PreserveStorage; std::__cxx11::string = std::__cxx11::basic_string<char>]'
mmquant.h:2009:35:   required from here
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h:136:18: warning: unused variable 'data' [-Wunused-variable]
             SEXP data = Parent::get__();
                  ^~~~
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o Rmmquant.dll tmp.def RcppExports.o mmquant_wrapper.o -lz -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/Rmmquant.buildbin-libdir/00LOCK-Rmmquant/00new/Rmmquant/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Rmmquant'
    finding HTML links ... done
    Rmmquant                                html  
    RmmquantClass-class                     html  
    RmmquantClassExample                    html  
    RmmquantExample                         html  
    RmmquantRun                             html  
    counts-method                           html  
    show-RmmquantClass-method               html  
    validateRmmquant                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Rmmquant' ...
** libs
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c mmquant_wrapper.cpp -o mmquant_wrapper.o
In file included from C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp.h:57,
                 from mmquant_wrapper.cpp:1:
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h: In instantiation of 'void Rcpp::DataFrame_Impl<StoragePolicy>::set_type_after_push() [with StoragePolicy = Rcpp::PreserveStorage]':
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h:95:13:   required from 'void Rcpp::DataFrame_Impl<StoragePolicy>::push_back(const T&, const string&) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; StoragePolicy = Rcpp::PreserveStorage; std::__cxx11::string = std::__cxx11::basic_string<char>]'
mmquant.h:2009:35:   required from here
C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include/Rcpp/DataFrame.h:136:18: warning: unused variable 'data' [-Wunused-variable]
             SEXP data = Parent::get__();
                  ^~~~
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o Rmmquant.dll tmp.def RcppExports.o mmquant_wrapper.o -lz -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/Rmmquant.buildbin-libdir/Rmmquant/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Rmmquant' as Rmmquant_1.8.1.zip
* DONE (Rmmquant)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'Rmmquant' successfully unpacked and MD5 sums checked