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| Package 65/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
externalVector1.5.1Biocore TeamLast Changed Date: 2006-09-26 17:05:54 -0700 Last Changed Rev: 20172 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ ERROR ] | |
| wellington | Linux (SUSE 9.2) | i686 | OK | ERROR | ||
| churchill | Solaris 2.9 | sparc | OK | ERROR | ||
| lemming | Windows Server 2003 (32-bit) | x64 | OK | ERROR | ERROR |
| Package: externalVector |
| Version: 1.5.1 |
| Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check externalVector_1.5.1.tar.gz |
| RetCode: 1 |
| Time: 7.5 seconds |
| Status: ERROR |
| CheckDir: externalVector.Rcheck |
| Warnings: NA |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/externalVector.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-04-17 r41210) * checking for file 'externalVector/DESCRIPTION' ... OK * this is package 'externalVector' version '1.5.1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'externalVector' can be installed ... ERROR Installation failed. See '/home/biocbuild/bbs-2.1-bioc/meat/externalVector.Rcheck/00install.out' for details.
externalVector.Rcheck/00install.out:
* Installing *source* package 'externalVector' ... ** libs gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c allocator.c -o allocator.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c arraySummary.c -o arraySummary.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c coerce.c -o coerce.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c externalVector.c -o externalVector.o externalVector.c:7: warning: 'ScalarVector' defined but not used gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c groups.c -o groups.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c math.c -o math.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c slice.c -o slice.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c storage.c -o storage.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c subscript.c -o subscript.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o externalVector.so allocator.o arraySummary.o coerce.o externalVector.o groups.o math.o slice.o storage.o subscript.o -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** save image Creating a new generic function for "match" in "externalVector" Error in genericForPrimitive(f) : methods may not be defined for primitive function "is.finite" in this version of R Error: unable to load R code in package 'externalVector' Execution halted ERROR: execution of package source for 'externalVector' failed ** Removing '/home/biocbuild/bbs-2.1-bioc/meat/externalVector.Rcheck/externalVector'