To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ceu1kg")
In most cases, you don't need to download the package archive at all.
ceu1kg
|
This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see ceu1kg.
CEU (N=60) genotypes from 1000 genomes pilot phase I
Bioconductor version: 2.12
CEU genotypes from 1000 genomes "low coverage" pilot phase I (approx 8 million SNP calls released July 2010); includes Wellcome trust GENEVAR expression for 43 indiv
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("ceu1kg")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ceu1kg")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ceu1kg")
| R Script | ceu1kg overview | |
| Reference Manual |
Details
| biocViews | ExperimentData, Genetics, SNP |
| Version | 0.0.32 |
| License | Artistic-2.0 |
| Depends | R (>= 2.12.0), GGBase(>= 3.9.0), GGtools, Biobase |
| Imports | |
| LinkingTo | |
| Suggests | SNPlocs.Hsapiens.dbSNP.20101109 |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | ceu1kg_0.0.32.tar.gz |
| Windows Binary | ceu1kg_0.0.32.zip |
| Mac OS X 10.6 (Snow Leopard) | ceu1kg_0.0.32.tgz |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/ceu1kg/ |
| Package Downloads Report | Download Stats |
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