Multiple platform build/check report for BioC 3.20 - INSTALL results for trigger on palomino6

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4677
palomino6	Windows Server 2022 Datacenter	x64	4.4.1 (2024-06-14 ucrt) -- "Race for Your Life"	4416
lconway	macOS 12.7.1 Monterey	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4444
kjohnson3	macOS 13.6.5 Ventura	arm64	4.4.1 (2024-06-14) -- "Race for Your Life"	4393
palomino8	Windows Server 2022 Datacenter	x64	4.4.1 (2024-06-14 ucrt) -- "Race for Your Life"	4373
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for trigger on palomino6

To the developers/maintainers of the trigger package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/trigger.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: trigger

Version: 1.51.0

Command: C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL trigger

StartedAt: 2024-07-15 16:03:40 -0400 (Mon, 15 Jul 2024)

EndedAt: 2024-07-15 16:04:12 -0400 (Mon, 15 Jul 2024)

EllapsedTime: 32.0 seconds

RetCode: 0

Status: OK

Command output

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### Running command:
###
###   C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL trigger
###
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* installing to library 'C:/Users/biocbuild/bbs-3.20-bioc/R/library'
* installing *source* package 'trigger' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
gcc  -I"C:/Users/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c trigger.c -o trigger.o
trigger.c: In function 'mergeorder':
trigger.c:25:20: warning: variable 'n3' set but not used [-Wunused-but-set-variable]
   25 | int i1,i2,i3,n1,n2,n3;
      |                    ^~
trigger.c: In function 'sec_link_stat':
trigger.c:81:10: warning: variable 'nct' set but not used [-Wunused-but-set-variable]
   81 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function 'sec_link_stat_x':
trigger.c:153:10: warning: variable 'nct' set but not used [-Wunused-but-set-variable]
  153 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function 'condi_indep_stat':
trigger.c:233:10: warning: variable 'nct' set but not used [-Wunused-but-set-variable]
  233 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function 'condi_indep_stat_x':
trigger.c:310:10: warning: variable 'nct' set but not used [-Wunused-but-set-variable]
  310 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function 'condi_indep_stat_rx':
trigger.c:393:10: warning: variable 'nct' set but not used [-Wunused-but-set-variable]
  393 | int ntr, nct, i, j, k, nk;
      |          ^~~
gcc -shared -s -static-libgcc -o trigger.dll tmp.def trigger.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LC:/Users/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.20-bioc/R/library/00LOCK-trigger/00new/trigger/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (trigger)