Xuejun Liu
| Snapshot Date: 2024-12-19 13:00 -0500 (Thu, 19 Dec 2024) |
| git_url: https://git.bioconductor.org/packages/puma |
| git_branch: RELEASE_3_20 |
| git_last_commit: 269c99c |
| git_last_commit_date: 2024-10-29 09:27:54 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-12-23 12:05 -0500 (Mon, 23 Dec 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4744 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4487 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4515 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4467 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1617/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| puma 3.48.0 (landing page) Xuejun Liu
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the puma package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/puma.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: puma |
| Version: 3.48.0 |
| Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:puma.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings puma_3.48.0.tar.gz |
| StartedAt: 2024-12-20 04:52:04 -0500 (Fri, 20 Dec 2024) |
| EndedAt: 2024-12-20 04:58:13 -0500 (Fri, 20 Dec 2024) |
| EllapsedTime: 369.0 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: puma.Rcheck |
| Warnings: 0 |
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###
### Running command:
###
### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:puma.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings puma_3.48.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'F:/biocbuild/bbs-3.20-bioc/meat/puma.Rcheck'
* using R version 4.4.2 (2024-10-31 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'puma/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'puma' version '3.48.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'puma' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 13.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Package listed in more than one of Depends, Imports, Suggests, Enhances:
'oligoClasses'
A package should be listed in only one of these fields.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
'ROCR' 'limma' 'pumadata' 'snow'
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
':::' calls which should be '::':
'affy:::mm' 'affy:::pm' 'affy:::probeNames' 'oligo:::mm' 'oligo:::pm'
'oligo:::probeNames' 'oligo:::rma'
See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
PMmmgmos: no visible binding for global variable 'median'
PMmmgmos: no visible global function definition for 'description'
calcAUC: no visible global function definition for 'prediction'
calcAUC: no visible global function definition for 'performance'
calculateLimma: no visible global function definition for 'lmFit'
calculateLimma: no visible global function definition for
'contrasts.fit'
calculateLimma: no visible global function definition for 'eBayes'
calculateTtest : <anonymous>: no visible global function definition for
't.test'
clusterApplyLBDots : submit: no visible global function definition for
'sendCall'
clusterApplyLBDots: no visible global function definition for
'recvOneResult'
clusterNormE: no visible global function definition for 'var'
clusterNormVar: no visible global function definition for 'var'
compareLimmapumaDE: no visible global function definition for 'pdf'
compareLimmapumaDE: no visible global function definition for 'dev.off'
compareLimmapumaDE: no visible global function definition for 'par'
compareLimmapumaDE: no visible global function definition for
'vennDiagram'
createDesignMatrix: no visible global function definition for
'model.matrix'
erfc: no visible global function definition for 'pnorm'
gmhta: no visible global function definition for 'clusterEvalQ'
gmhta: no visible global function definition for 'data'
gmhta: no visible global function definition for 'clusterApplyLB'
gmhta: no visible global function definition for 'stopCluster'
gmhta: no visible binding for global variable 'median'
gmoExon: no visible global function definition for 'clusterEvalQ'
gmoExon: no visible global function definition for 'data'
gmoExon: no visible global function definition for 'clusterApplyLB'
gmoExon: no visible global function definition for 'stopCluster'
gmoExon: no visible binding for global variable 'median'
igmoExon: no visible global function definition for 'clusterEvalQ'
igmoExon: no visible global function definition for 'read.table'
igmoExon: no visible global function definition for 'data'
igmoExon: no visible global function definition for 'clusterApplyLB'
igmoExon: no visible global function definition for 'stopCluster'
igmoExon: no visible binding for global variable 'median'
just.mgmos: no visible binding for global variable 'median'
just.mmgmos: no visible binding for global variable 'median'
legend2: no visible global function definition for 'par'
legend2: no visible global function definition for 'xy.coords'
legend2 : rect2: no visible global function definition for 'rect'
legend2 : segments2: no visible global function definition for
'segments'
legend2 : points2: no visible global function definition for 'points'
legend2 : text2: no visible global function definition for 'text'
legend2: no visible global function definition for 'strwidth'
legend2: no visible global function definition for 'xinch'
legend2: no visible global function definition for 'yinch'
legend2: no visible global function definition for 'strheight'
matrixDistance: no visible global function definition for 'dist'
mgmos: no visible binding for global variable 'median'
mmgmos: no visible binding for global variable 'median'
plot.pumaPCARes: no visible global function definition for 'text'
plot.pumaPCARes: no visible global function definition for 'legend'
plotErrorBars: no visible global function definition for 'qnorm'
plotErrorBars: no visible global function definition for 'par'
plotErrorBars: no visible global function definition for 'even'
plotErrorBars: no visible global function definition for 'odd'
plotErrorBars: no visible global function definition for 'arrows'
plotErrorBars: no visible global function definition for 'points'
plotErrorBars: no visible global function definition for 'axis'
plotErrorBars: no visible global function definition for 'title'
plotHistTwoClasses: no visible global function definition for 'axis'
plotHistTwoClasses: no visible global function definition for 'box'
plotROC: no visible global function definition for 'prediction'
plotROC: no visible global function definition for 'performance'
plotWhiskers: no visible global function definition for 'segments'
plotWhiskers: no visible global function definition for 'qnorm'
plotWhiskers: no visible global function definition for 'points'
plotWhiskers: no visible global function definition for 'abline'
pumaClust: no visible global function definition for 'read.csv'
pumaClust: no visible global function definition for 'kmeans'
pumaClust: no visible global function definition for 'cov'
pumaClustii: no visible global function definition for 'read.csv'
pumaClustii: no visible global function definition for 'cov'
pumaComb: no visible global function definition for 'getMPIcluster'
pumaComb: no visible global function definition for 'makeCluster'
pumaComb: no visible global function definition for 'clusterEvalQ'
pumaComb: no visible global function definition for 'clusterApplyLB'
pumaCombImproved: no visible global function definition for
'getMPIcluster'
pumaCombImproved: no visible global function definition for
'makeCluster'
pumaCombImproved: no visible global function definition for
'clusterEvalQ'
pumaCombImproved: no visible global function definition for
'clusterApplyLB'
pumaFull: no visible global function definition for 'pdf'
pumaFull: no visible global function definition for 'par'
pumaFull: no visible global function definition for 'prcomp'
pumaFull: no visible global function definition for 'dev.off'
pumaNormalize: no visible binding for global variable 'median'
pumaPCA: no visible global function definition for 'prcomp'
pumaPCA: no visible global function definition for 'rnorm'
pumaPCA: no visible global function definition for 'optimise'
pumaPCA: no visible global function definition for 'optim'
pumaPCA: no visible global function definition for 'par'
pumaPCARemoveRedundancy: no visible global function definition for
'dist'
write.reslts,DEResult: no visible global function definition for
'write.table'
write.reslts,ExpressionSet: no visible global function definition for
'write.table'
write.reslts,exprReslt: no visible global function definition for
'write.table'
write.reslts,pumaPCARes: no visible global function definition for
'write.table'
Undefined global functions or variables:
abline arrows axis box clusterApplyLB clusterEvalQ contrasts.fit cov
data description dev.off dist eBayes even getMPIcluster kmeans legend
lmFit makeCluster median model.matrix odd optim optimise par pdf
performance pnorm points prcomp prediction qnorm read.csv read.table
rect recvOneResult rnorm segments sendCall stopCluster strheight
strwidth t.test text title var vennDiagram write.table xinch
xy.coords yinch
Consider adding
importFrom("grDevices", "dev.off", "pdf", "xy.coords")
importFrom("graphics", "abline", "arrows", "axis", "box", "legend",
"par", "points", "rect", "segments", "strheight",
"strwidth", "text", "title", "xinch", "yinch")
importFrom("stats", "cov", "dist", "kmeans", "median", "model.matrix",
"optim", "optimise", "pnorm", "prcomp", "qnorm", "rnorm",
"t.test", "var")
importFrom("utils", "data", "read.csv", "read.table", "write.table")
to your NAMESPACE file.
* checking Rd files ... NOTE
checkRd: (-1) DEResult-class.Rd:92: Escaped LaTeX specials: \_
checkRd: (-1) DEResult-class.Rd:93: Escaped LaTeX specials: \_
checkRd: (-1) PMmmgmos.Rd:26: Escaped LaTeX specials: \_
checkRd: (-1) PMmmgmos.Rd:37: Escaped LaTeX specials: \_
checkRd: (-1) createContrastMatrix.Rd:20: Escaped LaTeX specials: \&
checkRd: (-1) exprReslt-class.Rd:100: Escaped LaTeX specials: \_
checkRd: (-1) exprReslt-class.Rd:101: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) exprReslt-class.Rd:102: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) gmhta.Rd:26: Escaped LaTeX specials: \_
checkRd: (-1) gmoExon.Rd:28: Escaped LaTeX specials: \_
checkRd: (-1) hcomb.Rd:22: Escaped LaTeX specials: \_
checkRd: (-1) hcomb.Rd:23: Escaped LaTeX specials: \_
checkRd: (-1) igmoExon.Rd:28: Escaped LaTeX specials: \_
checkRd: (-1) justmgMOS.Rd:41: Escaped LaTeX specials: \_ \_
checkRd: (-1) justmmgMOS.Rd:41: Escaped LaTeX specials: \_ \_
checkRd: (-1) legend2.Rd:134: Escaped LaTeX specials: \&
checkRd: (-1) mgmos.Rd:25: Escaped LaTeX specials: \_ \_
checkRd: (-1) mgmos.Rd:35: Escaped LaTeX specials: \_
checkRd: (-1) mmgmos.Rd:26: Escaped LaTeX specials: \_ \_
checkRd: (-1) mmgmos.Rd:37: Escaped LaTeX specials: \_
checkRd: (-1) mmgmos.Rd:38: Escaped LaTeX specials: \_
checkRd: (-1) pumaFull.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) pumaFull.Rd:24: Escaped LaTeX specials: \_
checkRd: (-1) pumaFull.Rd:25: Escaped LaTeX specials: \_ \_ \_
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.20-bioc/R/library/puma/libs/x64/puma.dll':
Found '_exit', possibly from '_exit' (C)
Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
puma-package 47.19 0.62 47.81
pumaDE 29.86 0.02 29.87
pumaComb 16.30 0.01 16.32
pumaCombImproved 12.00 0.03 12.03
plot-methods 6.25 0.42 6.68
pumaclust 6.50 0.00 6.50
pumaPCA 5.22 0.36 5.58
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 5 NOTEs
See
'F:/biocbuild/bbs-3.20-bioc/meat/puma.Rcheck/00check.log'
for details.
puma.Rcheck/00install.out
##############################################################################
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###
### Running command:
###
### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL puma
###
##############################################################################
##############################################################################
* installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library'
* installing *source* package 'puma' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PMmultimgmos.c -o PMmultimgmos.o
In file included from PMmultimgmos.c:149:
o8comm.h: In function 'pmcalparameters':
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cregistration.c -o cregistration.o
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c donlp2.c -o donlp2.o
donlp2.c: In function 'o8st':
donlp2.c:471:33: warning: variable 'infiny' set but not used [-Wunused-but-set-variable]
471 | static DDOUBLE tol1,term, infiny;
| ^~~~~~
donlp2.c: At top level:
donlp2.c:2034:1: warning: "/*" within comment [-Wcomment]
2034 | /* **************************************************************************** */
|
donlp2.c: In function 'o8opti':
donlp2.c:2707:1: warning: "/*" within comment [-Wcomment]
2707 | /* inactive
|
donlp2.c:2079:44: warning: variable 'iumin' set but not used [-Wunused-but-set-variable]
2079 | static DDOUBLE delsig,delx,sum,term, iumin;
| ^~~~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gme.c -o gme.o
gme.c: In function 'gme_calparameters':
gme.c:266:16: warning: variable 'fstart' set but not used [-Wunused-but-set-variable]
266 | double fstart;
| ^~~~~~
In file included from gme.c:577:
o8comm.h: In function 'user_init_size_gme':
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:34: warning: unused variable 'fx' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
In file included from gme.c:663:
o8cons.h: In function 'solchk_gme':
o8cons.h:11:5: warning: unused variable 'tp4' [-Wunused-variable]
11 | tp3,tp4;
| ^~~
o8cons.h:11:1: warning: unused variable 'tp3' [-Wunused-variable]
11 | tp3,tp4;
| ^~~
o8cons.h:10:21: warning: unused variable 'tp2' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:17: warning: unused variable 'tp1' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:13: warning: unused variable 'tm1' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:9: warning: unused variable 'tm2' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:5: warning: unused variable 'tm3' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:1: warning: unused variable 'tm4' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:9:22: warning: unused variable 'tm5' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:18: warning: unused variable 'tm6' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:14: warning: unused variable 'tm7' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:10: warning: unused variable 'tm8' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:6: warning: unused variable 'tm9' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:1: warning: unused variable 'tm10' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~~
o8cons.h:8:5: warning: unused variable 'tm12' [-Wunused-variable]
8 | c45,tm12,
| ^~~~
o8cons.h:8:1: warning: unused variable 'c45' [-Wunused-variable]
8 | c45,tm12,
| ^~~
o8cons.h:7:22: warning: unused variable 'p9' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:19: warning: unused variable 'p8' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:16: warning: unused variable 'p7' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:13: warning: unused variable 'p5' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:10: warning: unused variable 'p4' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:7: warning: unused variable 'p2' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:1: warning: unused variable 'onep5' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~~~~
o8cons.h:6:20: warning: unused variable 'onep3' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:6:13: warning: unused variable 'twop11' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~~
o8cons.h:6:7: warning: unused variable 'twop4' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:6:1: warning: unused variable 'twom2' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:5:10: warning: unused variable 'seven' [-Wunused-variable]
5 | five,six,seven,
| ^~~~~
o8cons.h:5:6: warning: unused variable 'six' [-Wunused-variable]
5 | five,six,seven,
| ^~~
o8cons.h:5:1: warning: unused variable 'five' [-Wunused-variable]
5 | five,six,seven,
| ^~~~
o8cons.h:4:41: warning: unused variable 'four' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~~
o8cons.h:4:35: warning: unused variable 'three' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~~~
o8cons.h:4:31: warning: unused variable 'two' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~
o8cons.h:4:27: warning: unused variable 'one' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~
o8cons.h:4:22: warning: unused variable 'zero' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ipplr_c.c -o ipplr_c.o
ipplr_c.c: In function 'workout0':
ipplr_c.c:255:132: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
255 | while((fmaxn_ipplr(diff_mu1,in_param.conds)>in_param.eps)||(fmaxn_ipplr(diff_lamda,in_param.conds)>in_param.eps)&& (n<2000))
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from ipplr_c.c:150:
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
ipplr_c.c:209:20: warning: 'tempx' may be used uninitialized [-Wmaybe-uninitialized]
209 | if (tempx<=1.0e-3)
| ^
ipplr_c.c:159:21: note: 'tempx' was declared here
159 | double temp,tempx,alpha1,beta1,fopt,foptold,Fx1,Fx2;
| ^~~~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c multimgmos.c -o multimgmos.o
In file included from multimgmos.c:156:
o8comm.h: In function 'calparameters':
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
multimgmos.c: In function 'ef_mmgmos':
multimgmos.c:771:16: warning: variable 'alphaii' set but not used [-Wunused-but-set-variable]
771 | double alphaii[MAX_NUM_COND]={0.0}, c, d_mmgmos, t1, t2;
| ^~~~~~~
multimgmos.c: In function 'egradf_mmgmos':
multimgmos.c:893:101: warning: missing braces around initializer [-Wmissing-braces]
893 | double alphaii[MAX_NUM_COND]={0.0}, s1[MAX_NUM_COND]={0.0}, s2[MAX_NUM_PROBE][MAX_NUM_COND]={0.0}, c, d_mmgmos, t1, s3, s4;
| ^
| { }
multimgmos.c:893:16: warning: variable 'alphaii' set but not used [-Wunused-but-set-variable]
893 | double alphaii[MAX_NUM_COND]={0.0}, s1[MAX_NUM_COND]={0.0}, s2[MAX_NUM_PROBE][MAX_NUM_COND]={0.0}, c, d_mmgmos, t1, s3, s4;
| ^~~~~~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c newx.c -o newx.o
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pplr_c.c -o pplr_c.o
pplr_c.c: In function 'workout_comb1':
pplr_c.c:185:68: warning: unused variable 'x_temp' [-Wunused-variable]
185 | double exp_c[MAX_NUM_REPLICATE], var_c[MAX_NUM_REPLICATE], x_temp[MAX_NUM_COND];
| ^~~~~~
In file included from pplr_c.c:181:
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
pplr_c.c:242:20: warning: 'tempx' may be used uninitialized [-Wmaybe-uninitialized]
242 | if (tempx<=1.0e-3)
| ^
pplr_c.c:186:39: note: 'tempx' was declared here
186 | double v[MAX_NUM_COND], temp, tempx, foptold, fopt, lamda10[MAX_NUM_COND];
| ^~~~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pumaclust_c.c -o pumaclust_c.o
In file included from pumaclust_c.c:162:
o8comm.h: In function 'workout':
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pumaclustii_c.c -o pumaclustii_c.o
pumaclustii_c.c: In function 'workout_pumaclustii':
pumaclustii_c.c:255:49: warning: variable 'temp2' set but not used [-Wunused-but-set-variable]
255 | double *exprs=NULL, *vars=NULL, temp, *temp2, temp3, **t3=NULL, *t4=NULL;
| ^~~~~
In file included from pumaclustii_c.c:248:
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:34: warning: unused variable 'fx' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:33: warning: unused variable 'analyt' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:28: warning: unused variable 'deldif' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:29: warning: unused variable 'nonlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:24: warning: unused variable 'nlin' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:7:14: warning: unused variable 'n' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
pumaclustii_c.c:695:41: warning: 'K_nz_t' may be used uninitialized [-Wmaybe-uninitialized]
695 | in_param.K_best = K_nz_t;
| ~~~~~~~~~~~~~~~~^~~~~~~~
pumaclustii_c.c:257:19: note: 'K_nz_t' was declared here
257 | int K_nz, K_nz_t, n_hat, iit;
| ^~~~~~
pumaclustii_c.c:692:20: warning: 'F_t' may be used uninitialized [-Wmaybe-uninitialized]
692 | if (F_t>=F_max)
| ^
pumaclustii_c.c:258:46: note: 'F_t' was declared here
258 | double F_max, F0, F, Ft0, Ft, max_A, F_t;
| ^~~
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c user_eval.c -o user_eval.o
In file included from user_eval.c:67:
o8cons.h: In function 'user_eval':
o8cons.h:11:5: warning: unused variable 'tp4' [-Wunused-variable]
11 | tp3,tp4;
| ^~~
o8cons.h:11:1: warning: unused variable 'tp3' [-Wunused-variable]
11 | tp3,tp4;
| ^~~
o8cons.h:10:21: warning: unused variable 'tp2' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:17: warning: unused variable 'tp1' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:5: warning: unused variable 'tm3' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:10:1: warning: unused variable 'tm4' [-Wunused-variable]
10 | tm4,tm3,tm2,tm1,tp1,tp2,
| ^~~
o8cons.h:9:22: warning: unused variable 'tm5' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:18: warning: unused variable 'tm6' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:14: warning: unused variable 'tm7' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:10: warning: unused variable 'tm8' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:6: warning: unused variable 'tm9' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~
o8cons.h:9:1: warning: unused variable 'tm10' [-Wunused-variable]
9 | tm10,tm9,tm8,tm7,tm6,tm5,
| ^~~~
o8cons.h:8:5: warning: unused variable 'tm12' [-Wunused-variable]
8 | c45,tm12,
| ^~~~
o8cons.h:7:22: warning: unused variable 'p9' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:19: warning: unused variable 'p8' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:16: warning: unused variable 'p7' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:13: warning: unused variable 'p5' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:7: warning: unused variable 'p2' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~
o8cons.h:7:1: warning: unused variable 'onep5' [-Wunused-variable]
7 | onep5,p2,p4,p5,p7,p8,p9,
| ^~~~~
o8cons.h:6:20: warning: unused variable 'onep3' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:6:13: warning: unused variable 'twop11' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~~
o8cons.h:6:7: warning: unused variable 'twop4' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:6:1: warning: unused variable 'twom2' [-Wunused-variable]
6 | twom2,twop4,twop11,onep3,
| ^~~~~
o8cons.h:5:6: warning: unused variable 'six' [-Wunused-variable]
5 | five,six,seven,
| ^~~
o8cons.h:5:1: warning: unused variable 'five' [-Wunused-variable]
5 | five,six,seven,
| ^~~~
o8cons.h:4:31: warning: unused variable 'two' [-Wunused-variable]
4 | extern const DDOUBLE zero,one,two,three,four,
| ^~~
In file included from user_eval.c:65:
o8fint.h:23:25: warning: unused variable 'corr' [-Wunused-variable]
23 | X LLOGICAL bloc,valid,corr;
| ^~~~
o8fint.h:23:14: warning: unused variable 'bloc' [-Wunused-variable]
23 | X LLOGICAL bloc,valid,corr;
| ^~~~
In file included from user_eval.c:64:
o8comm.h:60:15: warning: unused variable 'xst' [-Wunused-variable]
60 | X DDOUBLE *xst;
| ^~~
o8comm.h:58:14: warning: unused variable 'nreset' [-Wunused-variable]
58 | X IINTEGER nreset;
| ^~~~~~
o8comm.h:56:23: warning: unused variable 'big' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:56:20: warning: unused variable 'up' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~
o8comm.h:56:15: warning: unused variable 'low' [-Wunused-variable]
56 | X DDOUBLE *low,*up,big;
| ^~~
o8comm.h:54:19: warning: unused variable 'og' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:54:15: warning: unused variable 'ug' [-Wunused-variable]
54 | X DDOUBLE *ug,*og;
| ^~
o8comm.h:52:20: warning: unused variable 'meu' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~
o8comm.h:52:14: warning: unused variable 'prou' [-Wunused-variable]
52 | X FILE *prou,*meu;
| ^~~~
o8comm.h:50:33: warning: unused variable 'lastch' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:26: warning: unused variable 'lastup' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:19: warning: unused variable 'lastdw' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~~~
o8comm.h:50:14: warning: unused variable 'clow' [-Wunused-variable]
50 | X IINTEGER clow,lastdw,lastup,lastch;
| ^~~~
o8comm.h:49:14: warning: unused variable 'level' [-Wunused-variable]
49 | X DDOUBLE level;
| ^~~~~
o8comm.h:47:21: warning: unused variable 'stmaxl' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:47:14: warning: unused variable 'delta1' [-Wunused-variable]
47 | X DDOUBLE delta1,stmaxl;
| ^~~~~~
o8comm.h:46:50: warning: unused variable 'stptrm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~~
o8comm.h:46:44: warning: unused variable 'delta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:38: warning: unused variable 'sigla' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:32: warning: unused variable 'sigsm' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:26: warning: unused variable 'theta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:20: warning: unused variable 'bbeta' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:46:14: warning: unused variable 'alpha' [-Wunused-variable]
46 | X DDOUBLE alpha,bbeta,theta,sigsm,sigla,delta,stptrm;
| ^~~~~
o8comm.h:44:40: warning: unused variable 'taumax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:33: warning: unused variable 'taufac' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:27: warning: unused variable 'tauqp' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~
o8comm.h:44:20: warning: unused variable 'updmy0' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:44:13: warning: unused variable 'scfmax' [-Wunused-variable]
44 | scfmax,updmy0,tauqp,taufac,taumax;
| ^~~~~~
o8comm.h:43:46: warning: unused variable 'c1d' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:41: warning: unused variable 'epsx' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:37: warning: unused variable 'eta' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:32: warning: unused variable 'rho1' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~
o8comm.h:43:28: warning: unused variable 'rho' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~
o8comm.h:43:21: warning: unused variable 'smallw' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:43:14: warning: unused variable 'smalld' [-Wunused-variable]
43 | X DDOUBLE smalld,smallw,rho,rho1,eta,epsx,c1d,
| ^~~~~~
o8comm.h:42:45: warning: unused variable 'ny' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~
o8comm.h:42:41: warning: unused variable 'tau' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:42:36: warning: unused variable 'tau0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:29: warning: unused variable 'delmin' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~~
o8comm.h:42:23: warning: unused variable 'del01' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~~
o8comm.h:42:18: warning: unused variable 'del0' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~~
o8comm.h:42:14: warning: unused variable 'del' [-Wunused-variable]
42 | X DDOUBLE del,del0,del01,delmin,tau0,tau,ny;
| ^~~
o8comm.h:41:14: warning: unused variable 'iterma' [-Wunused-variable]
41 | X IINTEGER iterma;
| ^~~~~~
o8comm.h:39:32: warning: unused variable 'work' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~
o8comm.h:39:24: warning: unused variable 'infeas' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~~
o8comm.h:39:18: warning: unused variable 'slack' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~~~~
o8comm.h:39:14: warning: unused variable 'yu' [-Wunused-variable]
39 | *yu,*slack,infeas,*work;
| ^~
o8comm.h:38:24: warning: unused variable 'scf0' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~
o8comm.h:38:20: warning: unused variable 'scf' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~
o8comm.h:38:14: warning: unused variable 'resst' [-Wunused-variable]
38 | *resst,scf,scf0,
| ^~~~~
o8comm.h:37:20: warning: unused variable 'res1' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:37:14: warning: unused variable 'res0' [-Wunused-variable]
37 | *res0,*res1,
| ^~~~
o8comm.h:36:21: warning: unused variable 'res' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~~
o8comm.h:36:17: warning: unused variable 'w1' [-Wunused-variable]
36 | *w,*w1,*res,
| ^~
o8comm.h:36:14: warning: unused variable 'w' [-Wunused-variable]
36 | *w,*w1,*res,
| ^
o8comm.h:35:18: warning: unused variable 'u0' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^~
o8comm.h:35:15: warning: unused variable 'u' [-Wunused-variable]
35 | X DDOUBLE *u,*u0,
| ^
o8comm.h:33:32: warning: unused variable 'clist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~
o8comm.h:33:24: warning: unused variable 'aalist' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~
o8comm.h:33:14: warning: unused variable 'o8bind0' [-Wunused-variable]
33 | *o8bind0, *aalist,*clist;
| ^~~~~~~
o8comm.h:32:30: warning: unused variable 'o8bind' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:32:23: warning: unused variable 'alist' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~
o8comm.h:32:15: warning: unused variable 'violis' [-Wunused-variable]
32 | X IINTEGER *violis,*alist,*o8bind,
| ^~~~~~
o8comm.h:30:38: warning: unused variable 'matsc' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:32: warning: unused variable 'diag0' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:24: warning: unused variable 'scalm2' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~~
o8comm.h:30:18: warning: unused variable 'scalm' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^~~~~
o8comm.h:30:16: warning: unused variable 'a' [-Wunused-variable]
30 | X DDOUBLE **a,scalm,scalm2,*diag0,matsc;
| ^
o8comm.h:26:14: warning: unused variable 'colle' [-Wunused-variable]
26 | *colle;
| ^~~~~
o8comm.h:25:14: warning: unused variable 'cscal' [-Wunused-variable]
25 | *cscal,
| ^~~~~
o8comm.h:24:27: warning: unused variable 'diag' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~
o8comm.h:24:20: warning: unused variable 'betaq' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~~~~
o8comm.h:24:16: warning: unused variable 'qr' [-Wunused-variable]
24 | X DDOUBLE **qr,*betaq,*diag,
| ^~
o8comm.h:23:34: warning: unused variable 'rank' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:23:28: warning: unused variable 'colno' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:21: warning: unused variable 'perm1' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~~
o8comm.h:23:15: warning: unused variable 'perm' [-Wunused-variable]
23 | X IINTEGER *perm,*perm1,*colno,rank;
| ^~~~
o8comm.h:21:21: warning: unused variable 'gresn' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~~
o8comm.h:21:15: warning: unused variable 'gres' [-Wunused-variable]
21 | **gres,*gresn;
| ^~~~
o8comm.h:20:38: warning: unused variable 'gphi1' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:31: warning: unused variable 'gphi0' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:20:26: warning: unused variable 'qgf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:21: warning: unused variable 'gfn' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~
o8comm.h:20:15: warning: unused variable 'gradf' [-Wunused-variable]
20 | X DDOUBLE *gradf,gfn,*qgf,*gphi0,*gphi1,
| ^~~~~
o8comm.h:18:24: warning: unused variable 'resmin' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~~~
o8comm.h:18:18: warning: unused variable 'difx' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~~~
o8comm.h:18:14: warning: unused variable 'dd' [-Wunused-variable]
18 | *dd,*difx,*resmin;
| ^~
o8comm.h:17:42: warning: unused variable 'd0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:39: warning: unused variable 'd' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^
o8comm.h:17:33: warning: unused variable 'xmin' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~
o8comm.h:17:29: warning: unused variable 'x1' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:25: warning: unused variable 'x0' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~
o8comm.h:17:15: warning: unused variable 'donlp2_x' [-Wunused-variable]
17 | X DDOUBLE *donlp2_x,*x0,*x1,*xmin,*d,*d0,
| ^~~~~~~~
o8comm.h:16:39: warning: unused variable 'upsim' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~
o8comm.h:16:32: warning: unused variable 'cosphi' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:25: warning: unused variable 'dirder' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:18: warning: unused variable 'sigmin' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~~~~
o8comm.h:16:14: warning: unused variable 'sig' [-Wunused-variable]
16 | X DDOUBLE sig,sigmin,dirder,cosphi,upsim;
| ^~~
o8comm.h:15:70: warning: unused variable 'd0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:63: warning: unused variable 'ddnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:57: warning: unused variable 'dscal' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:52: warning: unused variable 'sig0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:45: warning: unused variable 'x0norm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~
o8comm.h:15:39: warning: unused variable 'xnorm' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~
o8comm.h:15:34: warning: unused variable 'b2n0' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:15:30: warning: unused variable 'b2n' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~
o8comm.h:15:18: warning: unused variable 'donlp2_fmin' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~~~~~~~~
o8comm.h:15:13: warning: unused variable 'fxst' [-Wunused-variable]
15 | fxst,donlp2_fmin,b2n,b2n0,xnorm,x0norm,sig0,dscal,ddnorm,d0norm;
| ^~~~
o8comm.h:14:41: warning: unused variable 'fx1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:37: warning: unused variable 'fx0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:14:34: warning: unused variable 'fx' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~
o8comm.h:14:27: warning: unused variable 'phimin' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~~~
o8comm.h:14:22: warning: unused variable 'phi1' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:17: warning: unused variable 'phi0' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~~
o8comm.h:14:13: warning: unused variable 'phi' [-Wunused-variable]
14 | phi,phi0,phi1,phimin,fx,fx0,fx1,
| ^~~
o8comm.h:13:24: warning: unused variable 'psimin' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~~
o8comm.h:13:18: warning: unused variable 'psist' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~~
o8comm.h:13:13: warning: unused variable 'psi1' [-Wunused-variable]
13 | psi1,psist,psimin,
| ^~~~
o8comm.h:12:42: warning: unused variable 'psi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:12:38: warning: unused variable 'psi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~
o8comm.h:12:31: warning: unused variable 'upsist' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~~
o8comm.h:12:25: warning: unused variable 'upsi1' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:19: warning: unused variable 'upsi0' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~~
o8comm.h:12:14: warning: unused variable 'upsi' [-Wunused-variable]
12 | X DDOUBLE upsi,upsi0,upsi1,upsist,psi,psi0,
| ^~~~
o8comm.h:10:21: warning: unused variable 'phase' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~
o8comm.h:10:14: warning: unused variable 'itstep' [-Wunused-variable]
10 | X IINTEGER itstep,phase;
| ^~~~~~
o8comm.h:9:16: warning: unused variable 'accinf' [-Wunused-variable]
9 | X DDOUBLE **accinf;
| ^~~~~~
o8comm.h:8:14: warning: unused variable 'optite' [-Wunused-variable]
8 | X RREAL optite;
| ^~~~~~
o8comm.h:7:14: warning: unused variable 'runtim' [-Wunused-variable]
7 | X RREAL runtim;
| ^~~~~~
In file included from o8comm.h:5:
o8fuco.h:33:13: warning: unused variable 'cfuerr' [-Wunused-variable]
33 | X LLOGICAL *cfuerr;
| ^~~~~~
o8fuco.h:31:13: warning: unused variable 'gconst' [-Wunused-variable]
31 | X LLOGICAL *gconst;
| ^~~~~~
o8fuco.h:29:14: warning: unused variable 'gunit' [-Wunused-variable]
29 | X IINTEGER **gunit;
| ^~~~~
o8fuco.h:27:13: warning: unused variable 'nonlinlist' [-Wunused-variable]
27 | X IINTEGER *nonlinlist;
| ^~~~~~~~~~
o8fuco.h:25:15: warning: unused variable 'ng' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:25:12: warning: unused variable 'nh' [-Wunused-variable]
25 | X IINTEGER nh,ng;
| ^~
o8fuco.h:20:22: warning: unused variable 'confuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~~~
o8fuco.h:20:14: warning: unused variable 'ffuerr' [-Wunused-variable]
20 | X LLOGICAL ffuerr,*confuerr;
| ^~~~~~
o8fuco.h:18:37: warning: unused variable 'cgres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~
o8fuco.h:18:31: warning: unused variable 'cres' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:23: warning: unused variable 'cfincr' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~~~
o8fuco.h:18:18: warning: unused variable 'icgf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~~
o8fuco.h:18:14: warning: unused variable 'icf' [-Wunused-variable]
18 | X IINTEGER icf,icgf,cfincr,*cres,*cgres;
| ^~~
o8fuco.h:16:40: warning: unused variable 'cold' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~
o8fuco.h:16:26: warning: unused variable 'silent' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~~
o8fuco.h:16:20: warning: unused variable 'eqres' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:16:14: warning: unused variable 'ident' [-Wunused-variable]
16 | X LLOGICAL ident,eqres,silent,analyt,cold;
| ^~~~~
o8fuco.h:15:37: warning: unused variable 'singul' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:15:33: warning: unused variable 'te3' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:29: warning: unused variable 'te2' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:25: warning: unused variable 'te1' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:21: warning: unused variable 'te0' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~
o8fuco.h:15:14: warning: unused variable 'intakt' [-Wunused-variable]
15 | X LLOGICAL intakt,te0,te1,te2,te3,singul;
| ^~~~~~
o8fuco.h:13:14: warning: unused variable 'epsdif' [-Wunused-variable]
13 | X DDOUBLE epsdif;
| ^~~~~~
o8fuco.h:11:13: warning: unused variable 'name' [-Wunused-variable]
11 | X char name[41];
| ^~~~
o8fuco.h:9:21: warning: unused variable 'tolmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:9:14: warning: unused variable 'epsmac' [-Wunused-variable]
9 | X DDOUBLE epsmac,tolmac,deldif;
| ^~~~~~
o8fuco.h:7:52: warning: unused variable 'mdualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:44: warning: unused variable 'ndualm' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~~
o8fuco.h:7:37: warning: unused variable 'nstep' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~~
o8fuco.h:7:19: warning: unused variable 'nres' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~~~
o8fuco.h:7:16: warning: unused variable 'nr' [-Wunused-variable]
7 | X IINTEGER n,nr,nres,nlin,nonlin, nstep, ndualm, mdualm;
| ^~
o8fuco.h:5:26: warning: unused variable 'lup' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
o8fuco.h:5:20: warning: unused variable 'llow' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~~
o8fuco.h:5:15: warning: unused variable 'val' [-Wunused-variable]
5 | X LLOGICAL *val,*llow,*lup;
| ^~~
gcc -shared -s -static-libgcc -o puma.dll tmp.def PMmultimgmos.o cregistration.o donlp2.o gme.o ipplr_c.o multimgmos.o newx.o pplr_c.o pumaclust_c.o pumaclustii_c.o user_eval.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-puma/00new/puma/libs/x64
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (puma)
puma.Rcheck/puma-Ex.timings
| name | user | system | elapsed | |
| DEResult-class | 0 | 0 | 0 | |
| PMmmgmos | 0 | 0 | 0 | |
| bcomb | 0 | 0 | 0 | |
| calcAUC | 0 | 0 | 0 | |
| calculateFC | 0 | 0 | 0 | |
| calculateLimma | 0 | 0 | 0 | |
| calculateTtest | 0 | 0 | 0 | |
| clusterNormE | 0 | 0 | 0 | |
| clusterNormVar | 0 | 0 | 0 | |
| createContrastMatrix | 0.04 | 0.00 | 0.05 | |
| createDesignMatrix | 0.05 | 0.00 | 0.04 | |
| erfc | 0 | 0 | 0 | |
| exprReslt-class | 0 | 0 | 0 | |
| gmhta | 0 | 0 | 0 | |
| gmoExon | 0 | 0 | 0 | |
| hcomb | 0 | 0 | 0 | |
| igmoExon | 0 | 0 | 0 | |
| legend2 | 0 | 0 | 0 | |
| license.puma | 0.02 | 0.00 | 0.02 | |
| matrixDistance | 0 | 0 | 0 | |
| mgmos | 0 | 0 | 0 | |
| mmgmos | 0 | 0 | 0 | |
| normalisation.gs | 0 | 0 | 0 | |
| numFP | 0 | 0 | 0 | |
| numOfFactorsToUse | 0 | 0 | 0 | |
| numTP | 0 | 0 | 0 | |
| orig_pplr | 0 | 0 | 0 | |
| plot-methods | 6.25 | 0.42 | 6.68 | |
| plotErrorBars | 0.24 | 0.02 | 0.25 | |
| plotHistTwoClasses | 0.01 | 0.00 | 0.01 | |
| plotROC | 0 | 0 | 0 | |
| pplr | 0.17 | 0.02 | 0.19 | |
| puma-package | 47.19 | 0.62 | 47.81 | |
| pumaClustii | 3.39 | 0.05 | 3.43 | |
| pumaComb | 16.30 | 0.01 | 16.32 | |
| pumaCombImproved | 12.00 | 0.03 | 12.03 | |
| pumaDE | 29.86 | 0.02 | 29.87 | |
| pumaFull | 0 | 0 | 0 | |
| pumaNormalize | 0.20 | 0.03 | 0.24 | |
| pumaPCA | 5.22 | 0.36 | 5.58 | |
| pumaclust | 6.5 | 0.0 | 6.5 | |
| removeUninformativeFactors | 0.03 | 0.00 | 0.03 | |