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This page was generated on 2025-11-06 12:01 -0500 (Thu, 06 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4902
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4638
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 922/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.26.0  (landing page)
Britta Velten
Snapshot Date: 2025-11-05 13:45 -0500 (Wed, 05 Nov 2025)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_22
git_last_commit: 76fc31b
git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

CHECK results for graper on kjohnson3

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.26.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
StartedAt: 2025-11-05 20:37:03 -0500 (Wed, 05 Nov 2025)
EndedAt: 2025-11-05 20:37:30 -0500 (Wed, 05 Nov 2025)
EllapsedTime: 27.4 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-09-10 r88807)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-882.953
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.909
ELB improved by 311.044

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.336
ELB improved by 62.5728

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.554
ELB improved by 38.7822

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.459
ELB improved by 17.0945

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.201
ELB improved by 7.25833

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.197
ELB improved by 4.00423

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.562
ELB improved by 2.63531

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.507
ELB improved by 2.05475

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.647
ELB improved by 1.86002

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.783
ELB improved by 1.86371

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.811
ELB improved by 1.97191

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.689
ELB improved by 2.12255

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.435
ELB improved by 2.25371

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.14
ELB improved by 2.29515

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.953
ELB improved by 2.18667

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.036
ELB improved by 1.91686

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.49
ELB improved by 1.5458

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.32
ELB improved by 1.17089

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.457
ELB improved by 0.862813

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.816
ELB improved by 0.640246

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.327
ELB improved by 0.489789

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.936
ELB improved by 0.390761

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.61
ELB improved by 0.326057

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.326
ELB improved by 0.283977

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.069
ELB improved by 0.25731

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.826
ELB improved by 0.242137

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.589
ELB improved by 0.237088

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.346
ELB improved by 0.242887

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.086
ELB improved by 0.260557

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.802
ELB improved by 0.284318

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.508
ELB improved by 0.29339

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.235
ELB improved by 0.272749

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.995
ELB improved by 0.240641

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.778
ELB improved by 0.217047

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.575
ELB improved by 0.203049

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.38
ELB improved by 0.194326

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.192
ELB improved by 0.188212

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.009
ELB improved by 0.183574

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.829
ELB improved by 0.179961

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.651
ELB improved by 0.177239

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.476
ELB improved by 0.17551

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.301
ELB improved by 0.175132

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.124
ELB improved by 0.176728

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.943
ELB improved by 0.181216

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.753
ELB improved by 0.189886

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.549
ELB improved by 0.204373

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.323
ELB improved by 0.225955

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.069
ELB improved by 0.253128

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.791
ELB improved by 0.278052

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.502
ELB improved by 0.288978

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.22
ELB improved by 0.28218

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.955
ELB improved by 0.265198

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.709
ELB improved by 0.245958

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.481
ELB improved by 0.227634

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.27
ELB improved by 0.211018

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.074
ELB improved by 0.196595

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.889
ELB improved by 0.185036

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.712
ELB improved by 0.177053

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.539
ELB improved by 0.17281

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.368
ELB improved by 0.170869

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.2
ELB improved by 0.167711

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.04
ELB improved by 0.160106

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.891
ELB improved by 0.149003

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.752
ELB improved by 0.138863

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.62
ELB improved by 0.132517

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.492
ELB improved by 0.127883

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.372
ELB improved by 0.119784

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.266
ELB improved by 0.106034

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.176
ELB improved by 0.0906268

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.096
ELB improved by 0.0793752

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.02
ELB improved by 0.075827

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.938
ELB improved by 0.0824065

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.835
ELB improved by 0.103169

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.691
ELB improved by 0.143608

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.491
ELB improved by 0.199785

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.254
ELB improved by 0.237246

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.038
ELB improved by 0.216624

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.88
ELB improved by 0.157931

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.776
ELB improved by 0.1034

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.709
ELB improved by 0.0669159

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.664
ELB improved by 0.0454388

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.63
ELB improved by 0.0335371

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.603
ELB improved by 0.0271012

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.58
ELB improved by 0.0236214

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.558
ELB improved by 0.021776

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.537
ELB improved by 0.0209613

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.516
ELB improved by 0.0209585

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.494
ELB improved by 0.0217472

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.471
ELB improved by 0.0234085

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.445
ELB improved by 0.0260577

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.415
ELB improved by 0.0297515

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.381
ELB improved by 0.0343228

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.341
ELB improved by 0.0391512

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.298
ELB improved by 0.0430494

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.254
ELB improved by 0.044645

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.21
ELB improved by 0.043336

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.17
ELB improved by 0.039931

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.134
ELB improved by 0.0360467

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.101
ELB improved by 0.0329568

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.07
ELB improved by 0.0311569

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.04
ELB improved by 0.030641

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.008
ELB improved by 0.0312155

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.976
ELB improved by 0.0325499

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.942
ELB improved by 0.0340446

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.907
ELB improved by 0.034763

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.873
ELB improved by 0.0337314

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.843
ELB improved by 0.0305993

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.817
ELB improved by 0.0260308

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.795
ELB improved by 0.0212535

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.778
ELB improved by 0.0172325

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.764
ELB improved by 0.0143165

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.752
ELB improved by 0.0124194

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.74
ELB improved by 0.0113063

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.729
ELB improved by 0.0107499

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.719
ELB improved by 0.0105733

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.708
ELB improved by 0.0106445

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.697
ELB improved by 0.0108621

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.686
ELB improved by 0.0111459

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.675
ELB improved by 0.0114337

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.663
ELB improved by 0.0116852

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.651
ELB improved by 0.0118885

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.639
ELB improved by 0.0120661

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.627
ELB improved by 0.0122803

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.614
ELB improved by 0.0126383

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.601
ELB improved by 0.0133049

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.586
ELB improved by 0.0145348

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.57
ELB improved by 0.0167493

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.549
ELB improved by 0.0206956

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.521
ELB improved by 0.0277586

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.481
ELB improved by 0.0404591

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.418
ELB improved by 0.062761

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.32
ELB improved by 0.0980992

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.179
ELB improved by 0.141066

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.01
ELB improved by 0.168425

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.855
ELB improved by 0.155616

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.744
ELB improved by 0.110584

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.68
ELB improved by 0.0646515

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.645
ELB improved by 0.0348119

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.625
ELB improved by 0.0192992

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.613
ELB improved by 0.0119325

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.605
ELB improved by 0.00846622

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-839.389
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-557.845
ELB improved by 281.544

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.651
ELB improved by 57.1936

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.798
ELB improved by 31.8529

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.81
ELB improved by 11.9881

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.99
ELB improved by 4.82003

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.84
ELB improved by 3.15002

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.122
ELB improved by 2.71759

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.524
ELB improved by 2.59864

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.005
ELB improved by 2.51852

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.664
ELB improved by 2.34161

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.637
ELB improved by 2.02697

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.016
ELB improved by 1.62019

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.807
ELB improved by 1.20969

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.94
ELB improved by 0.866676

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.325
ELB improved by 0.615284

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.881
ELB improved by 0.444173

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.55
ELB improved by 0.331015

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.293
ELB improved by 0.256252

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.087
ELB improved by 0.206124

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.916
ELB improved by 0.171679

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.768
ELB improved by 0.147268

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.639
ELB improved by 0.12938

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.523
ELB improved by 0.115838

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.418
ELB improved by 0.105284

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.321
ELB improved by 0.0968506

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.231
ELB improved by 0.0899736

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.147
ELB improved by 0.0842748

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.067
ELB improved by 0.0794953

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.992
ELB improved by 0.0754558

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.92
ELB improved by 0.0720314

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.851
ELB improved by 0.0691354

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.784
ELB improved by 0.0667091

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.719
ELB improved by 0.0647139

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.656
ELB improved by 0.0631267

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.594
ELB improved by 0.0619356

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.533
ELB improved by 0.0611376

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.472
ELB improved by 0.0607361

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.411
ELB improved by 0.0607388

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.35
ELB improved by 0.0611554

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.288
ELB improved by 0.0619937

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.225
ELB improved by 0.0632556

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.16
ELB improved by 0.0649318

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.093
ELB improved by 0.0669956

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.024
ELB improved by 0.0693987

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.952
ELB improved by 0.0720708

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.877
ELB improved by 0.0749247

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.799
ELB improved by 0.0778687

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.718
ELB improved by 0.0808241

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.634
ELB improved by 0.0837415

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.548
ELB improved by 0.0866109

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.458
ELB improved by 0.0894617

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.366
ELB improved by 0.0923564

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.27
ELB improved by 0.0953841

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.172
ELB improved by 0.0986602

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.069
ELB improved by 0.102335

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.963
ELB improved by 0.106611

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.851
ELB improved by 0.111772

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.733
ELB improved by 0.118222

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.606
ELB improved by 0.126541

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.469
ELB improved by 0.137562

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.316
ELB improved by 0.152473

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.143
ELB improved by 0.1729

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.943
ELB improved by 0.20082

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.705
ELB improved by 0.237945

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.421
ELB improved by 0.284111

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.085
ELB improved by 0.335342

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.7
ELB improved by 0.384768

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.273
ELB improved by 0.427701

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.809
ELB improved by 0.46414

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.314
ELB improved by 0.494869

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.796
ELB improved by 0.517486

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.27
ELB improved by 0.526504

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.752
ELB improved by 0.517273

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.261
ELB improved by 0.491239

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.805
ELB improved by 0.456451

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.383
ELB improved by 0.421667

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.993
ELB improved by 0.390417

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.633
ELB improved by 0.360074

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.306
ELB improved by 0.326116

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.019
ELB improved by 0.28793

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.768
ELB improved by 0.250163

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.549
ELB improved by 0.219378

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.348
ELB improved by 0.201303

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.148
ELB improved by 0.199922

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.934
ELB improved by 0.213681

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.706
ELB improved by 0.227797

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.482
ELB improved by 0.224752

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.266
ELB improved by 0.215928

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.036
ELB improved by 0.229249

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.769
ELB improved by 0.267682

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.472
ELB improved by 0.296963

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.19
ELB improved by 0.282039

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.958
ELB improved by 0.231297

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.786
ELB improved by 0.172496

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.664
ELB improved by 0.122294

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.578
ELB improved by 0.0855496

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.517
ELB improved by 0.0608794

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.472
ELB improved by 0.0450153

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.437
ELB improved by 0.0349292

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.409
ELB improved by 0.0284258

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.385
ELB improved by 0.0240952

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.364
ELB improved by 0.0210889

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.345
ELB improved by 0.0189113

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.327
ELB improved by 0.0172754

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.311
ELB improved by 0.0160142

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.296
ELB improved by 0.0150296

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.282
ELB improved by 0.014264

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.268
ELB improved by 0.0136846

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.255
ELB improved by 0.0132759

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.242
ELB improved by 0.0130361

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.229
ELB improved by 0.0129776

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.216
ELB improved by 0.0131307

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.202
ELB improved by 0.0135525

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.188
ELB improved by 0.0143438

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.172
ELB improved by 0.0156805

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.155
ELB improved by 0.0178736

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.133
ELB improved by 0.0214816

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.106
ELB improved by 0.0275167

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.068
ELB improved by 0.0377781

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.013
ELB improved by 0.0551719

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.93
ELB improved by 0.0830783

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.808
ELB improved by 0.121081

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.652
ELB improved by 0.156283

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.487
ELB improved by 0.165357

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.346
ELB improved by 0.141303

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.242
ELB improved by 0.103083

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.173
ELB improved by 0.0693807

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.127
ELB improved by 0.0456634

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.097
ELB improved by 0.0304219

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.076
ELB improved by 0.0209474

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.061
ELB improved by 0.0151049

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.049
ELB improved by 0.011483

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.04
ELB improved by 0.00920472

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-882.517
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.087
ELB improved by 319.43

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.511
ELB improved by 55.5763

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.068
ELB improved by 30.4428

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.134
ELB improved by 12.9339

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.855
ELB improved by 5.27876

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.911
ELB improved by 2.94387

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.74
ELB improved by 2.17102

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.875
ELB improved by 1.86522

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.17
ELB improved by 1.70492

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.587
ELB improved by 1.58325

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.124
ELB improved by 1.46251

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.797
ELB improved by 1.32759

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.622
ELB improved by 1.17506

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.61
ELB improved by 1.01147

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.76
ELB improved by 0.850148

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.055
ELB improved by 0.704718

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.472
ELB improved by 0.583348

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.985
ELB improved by 0.487436

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.571
ELB improved by 0.41401

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.212
ELB improved by 0.358723

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.894
ELB improved by 0.317593

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.607
ELB improved by 0.287498

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.341
ELB improved by 0.266136

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.089
ELB improved by 0.251903

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.845
ELB improved by 0.243828

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.603
ELB improved by 0.24152

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.358
ELB improved by 0.245132

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.103
ELB improved by 0.255337

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.83
ELB improved by 0.273346

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.529
ELB improved by 0.300966

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.188
ELB improved by 0.340713

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.792
ELB improved by 0.395964

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.321
ELB improved by 0.471147

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.749
ELB improved by 0.57192

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.044
ELB improved by 0.70522

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.165
ELB improved by 0.878893

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.065
ELB improved by 1.10017

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.693
ELB improved by 1.37166

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.01
ELB improved by 1.68286

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.015
ELB improved by 1.99534

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.787
ELB improved by 2.22731

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.521
ELB improved by 2.26597

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.48
ELB improved by 2.04124

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.867
ELB improved by 1.6134

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.721
ELB improved by 1.14569

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.951
ELB improved by 0.770143

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.432
ELB improved by 0.518613

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.069
ELB improved by 0.363102

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.801
ELB improved by 0.2684

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.59
ELB improved by 0.21065

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.413
ELB improved by 0.176798

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.252
ELB improved by 0.160937

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.09
ELB improved by 0.161958

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.909
ELB improved by 0.181635

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.689
ELB improved by 0.219699

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.423
ELB improved by 0.266093

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.111
ELB improved by 0.311552

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.737
ELB improved by 0.374349

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.288
ELB improved by 0.448889

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.84
ELB improved by 0.448639

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.476
ELB improved by 0.363323

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 0.2606

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.035
ELB improved by 0.180638

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.901
ELB improved by 0.133978

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.794
ELB improved by 0.107071

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.707
ELB improved by 0.0872167

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.636
ELB improved by 0.0705208

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.579
ELB improved by 0.0568538

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.533
ELB improved by 0.046231

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.495
ELB improved by 0.0382329

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.463
ELB improved by 0.0322719

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.435
ELB improved by 0.027798

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.41
ELB improved by 0.0243785

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.389
ELB improved by 0.0217041

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.369
ELB improved by 0.0195661

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.351
ELB improved by 0.0178261

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.335
ELB improved by 0.0163924

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.32
ELB improved by 0.0152027

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.306
ELB improved by 0.0142137

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.292
ELB improved by 0.013394

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.279
ELB improved by 0.01272

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.267
ELB improved by 0.0121736

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.256
ELB improved by 0.0117401

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.244
ELB improved by 0.0114073

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.233
ELB improved by 0.011164

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.222
ELB improved by 0.0109994

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.211
ELB improved by 0.0109026

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.2
ELB improved by 0.0108616

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.189
ELB improved by 0.0108639

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.178
ELB improved by 0.0108963

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.168
ELB improved by 0.010946

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.157
ELB improved by 0.0110027

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.145
ELB improved by 0.0110597

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.134
ELB improved by 0.0111157

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.123
ELB improved by 0.0111759

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.112
ELB improved by 0.0112513

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.101
ELB improved by 0.0113575

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.089
ELB improved by 0.0115125

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.077
ELB improved by 0.0117339

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.065
ELB improved by 0.0120356

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.053
ELB improved by 0.0124236

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.04
ELB improved by 0.0128919

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.027
ELB improved by 0.0134169

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.013
ELB improved by 0.013952

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.998
ELB improved by 0.0144259

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.983
ELB improved by 0.0147475

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.969
ELB improved by 0.0148217

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.954
ELB improved by 0.0145749

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.94
ELB improved by 0.0139819

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.927
ELB improved by 0.0130793

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.915
ELB improved by 0.0119574

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.904
ELB improved by 0.0107328

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.895
ELB improved by 0.0095157

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.732
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.099
ELB improved by 312.633

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.969
ELB improved by 58.1299

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.289
ELB improved by 28.6799

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.348
ELB improved by 11.9407

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.185
ELB improved by 6.16303

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.841
ELB improved by 4.34385

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.025
ELB improved by 3.81649

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.344
ELB improved by 3.68109

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.657
ELB improved by 3.68676

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.961
ELB improved by 3.69642

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.379
ELB improved by 3.58134

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.119
ELB improved by 3.26057

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.407
ELB improved by 2.71209

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.391
ELB improved by 2.0152

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.987
ELB improved by 1.40484

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.973
ELB improved by 1.01332

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.179
ELB improved by 0.794779

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.505
ELB improved by 0.673618

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.904
ELB improved by 0.601378

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.351
ELB improved by 0.552627

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.836
ELB improved by 0.515089

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.352
ELB improved by 0.483697

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.895
ELB improved by 0.457338

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.458
ELB improved by 0.437003

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.033
ELB improved by 0.424596

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.612
ELB improved by 0.421585

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.185
ELB improved by 0.426613

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.752
ELB improved by 0.433496

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.316
ELB improved by 0.435266

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.884
ELB improved by 0.432329

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.453
ELB improved by 0.430874

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.019
ELB improved by 0.434447

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.577
ELB improved by 0.441819

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.127
ELB improved by 0.44996

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.67
ELB improved by 0.457041

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.206
ELB improved by 0.463848

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.732
ELB improved by 0.474395

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.234
ELB improved by 0.497091

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.695
ELB improved by 0.539761

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.115
ELB improved by 0.579213

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.567
ELB improved by 0.548789

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.125
ELB improved by 0.441886

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.799
ELB improved by 0.326264

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.56
ELB improved by 0.238082

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.382
ELB improved by 0.178044

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.243
ELB improved by 0.139112

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.129
ELB improved by 0.114644

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.029
ELB improved by 0.0996726

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.938
ELB improved by 0.0909344

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.852
ELB improved by 0.0864459

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.767
ELB improved by 0.0849793

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.681
ELB improved by 0.0856016

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.594
ELB improved by 0.087321

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.505
ELB improved by 0.0889496

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.415
ELB improved by 0.0893248

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.328
ELB improved by 0.0877497

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.244
ELB improved by 0.0841365

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.165
ELB improved by 0.0787129

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.093
ELB improved by 0.0718722

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.029
ELB improved by 0.0643455

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.972
ELB improved by 0.0570722

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.921
ELB improved by 0.0506727

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.876
ELB improved by 0.0451796

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.835
ELB improved by 0.0402592

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.8
ELB improved by 0.0355721

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.769
ELB improved by 0.0309821

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.742
ELB improved by 0.0265678

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.72
ELB improved by 0.0225139

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.701
ELB improved by 0.0189855

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.685
ELB improved by 0.0160572

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.671
ELB improved by 0.0137104

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.659
ELB improved by 0.0118667

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.649
ELB improved by 0.0104266

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.639
ELB improved by 0.00929465

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  1.036   0.077   1.110

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0290.0050.034
getPIPs0.0270.0040.031
graper0.0510.0080.058
makeExampleData0.0040.0010.004
makeExampleDataWithUnequalGroups0.0040.0000.005
plotELBO0.1230.0070.130
plotGroupPenalties0.4310.0100.446
plotPosterior0.2230.0080.231
predict.graper1.0270.0291.058
print.graper0.0260.0040.031