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This page was generated on 2025-10-16 11:38 -0400 (Thu, 16 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4833
merida1macOS 12.7.6 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4614
kjohnson1macOS 13.7.5 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4555
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4586
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 915/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.24.2  (landing page)
Britta Velten
Snapshot Date: 2025-10-13 13:40 -0400 (Mon, 13 Oct 2025)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_21
git_last_commit: fb5f237
git_last_commit_date: 2025-06-24 03:18:49 -0400 (Tue, 24 Jun 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.6 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.7.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


CHECK results for graper on nebbiolo1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.24.2
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.24.2.tar.gz
StartedAt: 2025-10-15 23:51:21 -0400 (Wed, 15 Oct 2025)
EndedAt: 2025-10-15 23:52:52 -0400 (Wed, 15 Oct 2025)
EllapsedTime: 91.1 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.24.2’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.21-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.21-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.21-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.21-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.308
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.808
ELB improved by 298.5

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.123
ELB improved by 56.685

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.534
ELB improved by 34.5899

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.596
ELB improved by 14.938

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.254
ELB improved by 6.34143

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.24
ELB improved by 4.01385

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.753
ELB improved by 3.4874

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.311
ELB improved by 3.44213

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.798
ELB improved by 3.51279

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.29
ELB improved by 3.50747

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.034
ELB improved by 3.2568

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.337
ELB improved by 2.69697

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.362
ELB improved by 1.97512

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.034
ELB improved by 1.3274

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.165
ELB improved by 0.868781

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.585
ELB improved by 0.579969

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.183
ELB improved by 0.402195

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.892
ELB improved by 0.290973

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.672
ELB improved by 0.220467

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.497
ELB improved by 0.175228

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.351
ELB improved by 0.145413

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.226
ELB improved by 0.124899

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.116
ELB improved by 0.11007

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.017
ELB improved by 0.0988491

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.927
ELB improved by 0.0900441

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.844
ELB improved by 0.0829487

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.767
ELB improved by 0.0771279

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.695
ELB improved by 0.0723006

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.627
ELB improved by 0.0682762

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.562
ELB improved by 0.06492

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.5
ELB improved by 0.0621333

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.44
ELB improved by 0.0598424

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.382
ELB improved by 0.0579911

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.325
ELB improved by 0.0565362

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.27
ELB improved by 0.0554449

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.215
ELB improved by 0.0546917

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.161
ELB improved by 0.0542571

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.107
ELB improved by 0.0541254

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.052
ELB improved by 0.0542823

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.998
ELB improved by 0.0547133

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.942
ELB improved by 0.0554

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.886
ELB improved by 0.0563184

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.829
ELB improved by 0.0574358

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.77
ELB improved by 0.0587098

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.71
ELB improved by 0.0600891

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.648
ELB improved by 0.061516

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.585
ELB improved by 0.0629307

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.521
ELB improved by 0.0642765

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.455
ELB improved by 0.0655034

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.389
ELB improved by 0.0665706

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.321
ELB improved by 0.0674461

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.253
ELB improved by 0.0681065

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.185
ELB improved by 0.0685361

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.116
ELB improved by 0.068727

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.047
ELB improved by 0.0686794

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.979
ELB improved by 0.0684016

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.911
ELB improved by 0.0679105

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.844
ELB improved by 0.0672302

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.777
ELB improved by 0.0663906

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.712
ELB improved by 0.0654255

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.648
ELB improved by 0.0643701

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.584
ELB improved by 0.0632589

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.522
ELB improved by 0.0621234

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.461
ELB improved by 0.060991

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.401
ELB improved by 0.0598838

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.343
ELB improved by 0.0588178

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.285
ELB improved by 0.0578031

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.228
ELB improved by 0.056844

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.172
ELB improved by 0.0559398

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.117
ELB improved by 0.0550853

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.063
ELB improved by 0.0542719

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.009
ELB improved by 0.0534884

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.956
ELB improved by 0.052722

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.905
ELB improved by 0.051959

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.853
ELB improved by 0.051186

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.803
ELB improved by 0.05039

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.753
ELB improved by 0.0495601

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.705
ELB improved by 0.048687

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.657
ELB improved by 0.0477643

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.61
ELB improved by 0.0467885

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.564
ELB improved by 0.0457594

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.52
ELB improved by 0.0446803

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.476
ELB improved by 0.0435582

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.434
ELB improved by 0.042404

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.392
ELB improved by 0.0412326

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.352
ELB improved by 0.0400635

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.314
ELB improved by 0.038922

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.276
ELB improved by 0.0378412

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.239
ELB improved by 0.0368656

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.0360584

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.167
ELB improved by 0.0355134

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.132
ELB improved by 0.0353784

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.096
ELB improved by 0.0358985

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.058
ELB improved by 0.0374993

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.018
ELB improved by 0.0409451

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.97
ELB improved by 0.0476295

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.91
ELB improved by 0.0600207

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.828
ELB improved by 0.0819325

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.711
ELB improved by 0.11684

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.551
ELB improved by 0.16036

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.359
ELB improved by 0.191466

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.168
ELB improved by 0.190763

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.996
ELB improved by 0.172531

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.831
ELB improved by 0.164638

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.651
ELB improved by 0.180162

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.218461

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.173
ELB improved by 0.259373

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.906
ELB improved by 0.267567

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.664
ELB improved by 0.241683

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.446
ELB improved by 0.217959

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.219
ELB improved by 0.226932

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.929
ELB improved by 0.290598

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.531
ELB improved by 0.397662

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.096
ELB improved by 0.435016

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.756
ELB improved by 0.339987

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.541
ELB improved by 0.215019

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.411
ELB improved by 0.129963

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.329
ELB improved by 0.0818342

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.275
ELB improved by 0.0545845

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.236
ELB improved by 0.0386087

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.207
ELB improved by 0.0290568

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.184
ELB improved by 0.0233333

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.164
ELB improved by 0.0199206

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.146
ELB improved by 0.0178603

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.129
ELB improved by 0.0165087

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.114
ELB improved by 0.015423

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.1
ELB improved by 0.0143192

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.086
ELB improved by 0.0130599

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.075
ELB improved by 0.0116375

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.065
ELB improved by 0.0101334

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.056
ELB improved by 0.00866234

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.779
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.543
ELB improved by 273.237

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.176
ELB improved by 59.3672

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.408
ELB improved by 44.768

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.966
ELB improved by 21.4416

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.766
ELB improved by 9.19981

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.924
ELB improved by 5.84268

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.523
ELB improved by 5.40109

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.43
ELB improved by 6.09227

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.346
ELB improved by 7.08424

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.843
ELB improved by 7.50331

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.233
ELB improved by 6.61023

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.397
ELB improved by 4.83546

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.187
ELB improved by 3.21053

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.007
ELB improved by 2.17991

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.362
ELB improved by 1.64447

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.015
ELB improved by 1.347

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.929
ELB improved by 1.08613

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.046
ELB improved by 0.883475

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.274
ELB improved by 0.771169

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.556
ELB improved by 0.718012

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.864
ELB improved by 0.692793

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.185
ELB improved by 0.678827

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.516
ELB improved by 0.669147

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.854
ELB improved by 0.661981

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.195
ELB improved by 0.65814

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.536
ELB improved by 0.659496

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.868
ELB improved by 0.668038

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.183
ELB improved by 0.685306

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.47
ELB improved by 0.712227

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.721
ELB improved by 0.749891

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.918
ELB improved by 0.802882

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.029
ELB improved by 0.888252

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.984
ELB improved by 1.04492

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.736
ELB improved by 1.24861

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.515
ELB improved by 1.22119

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.565
ELB improved by 0.94963

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.864
ELB improved by 0.700931

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.339
ELB improved by 0.524651

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.936
ELB improved by 0.403387

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.616
ELB improved by 0.320555

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.353
ELB improved by 0.262173

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.136
ELB improved by 0.217653

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.954
ELB improved by 0.181878

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.799
ELB improved by 0.15523

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.659
ELB improved by 0.139952

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.521
ELB improved by 0.137565

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.371
ELB improved by 0.150109

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.187
ELB improved by 0.183876

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.934
ELB improved by 0.253075

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.575
ELB improved by 0.35909

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.153
ELB improved by 0.421724

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.767
ELB improved by 0.385839

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.42
ELB improved by 0.347833

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.089
ELB improved by 0.330508

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.779
ELB improved by 0.310333

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.467
ELB improved by 0.311376

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.115
ELB improved by 0.35253

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.76
ELB improved by 0.354394

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.511
ELB improved by 0.248899

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.375
ELB improved by 0.136243

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.301
ELB improved by 0.0746721

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.255
ELB improved by 0.0460444

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.222
ELB improved by 0.0322208

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.197
ELB improved by 0.0248984

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.177
ELB improved by 0.0205941

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.159
ELB improved by 0.0178199

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.143
ELB improved by 0.015916

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.128
ELB improved by 0.0145803

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.115
ELB improved by 0.0136764

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.102
ELB improved by 0.0131563

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.089
ELB improved by 0.0130322

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.075
ELB improved by 0.0133698

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.061
ELB improved by 0.014292

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.045
ELB improved by 0.0159773

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.026
ELB improved by 0.0186234

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.004
ELB improved by 0.0223123

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.977
ELB improved by 0.0267108

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.947
ELB improved by 0.0307122

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.914
ELB improved by 0.0325863

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.883
ELB improved by 0.0311979

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.856
ELB improved by 0.0272553

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.833
ELB improved by 0.0226762

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.814
ELB improved by 0.0188579

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.798
ELB improved by 0.016079

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.784
ELB improved by 0.0140263

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.772
ELB improved by 0.0123362

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.761
ELB improved by 0.0107916

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.751
ELB improved by 0.00932128

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.311
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.335
ELB improved by 333.976

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.836
ELB improved by 58.4989

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.25
ELB improved by 30.5858

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.286
ELB improved by 10.965

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.266
ELB improved by 5.01906

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.864
ELB improved by 3.40267

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.963
ELB improved by 2.90034

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.176
ELB improved by 2.78698

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.32
ELB improved by 2.85609

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.289
ELB improved by 3.03171

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.017
ELB improved by 3.2716

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.5
ELB improved by 3.51739

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.841
ELB improved by 3.65902

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.277
ELB improved by 3.5638

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.092
ELB improved by 3.18503

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.47
ELB improved by 2.62171

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.439
ELB improved by 2.03078

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.925
ELB improved by 1.51462

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.811
ELB improved by 1.11351

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.978
ELB improved by 0.83302

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.327
ELB improved by 0.651675

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.787
ELB improved by 0.53905

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.317
ELB improved by 0.470485

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.887
ELB improved by 0.4298

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.48
ELB improved by 0.407211

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.083
ELB improved by 0.396856

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.688
ELB improved by 0.394847

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.29
ELB improved by 0.398043

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.886
ELB improved by 0.40392

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.475
ELB improved by 0.4114

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.054
ELB improved by 0.421334

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.618
ELB improved by 0.435718

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.161
ELB improved by 0.456484

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.676
ELB improved by 0.484944

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.155
ELB improved by 0.521863

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.587
ELB improved by 0.567739

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.964
ELB improved by 0.623281

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.273
ELB improved by 0.690355

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.499
ELB improved by 0.773734

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.62
ELB improved by 0.879423

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.639
ELB improved by 0.980747

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.674
ELB improved by 0.965181

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.878
ELB improved by 0.795809

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.282
ELB improved by 0.596775

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.841
ELB improved by 0.440138

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.512
ELB improved by 0.329075

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.261
ELB improved by 0.251629

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.064
ELB improved by 0.197046

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.906
ELB improved by 0.157868

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.777
ELB improved by 0.129205

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.669
ELB improved by 0.107818

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.577
ELB improved by 0.0914843

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.499
ELB improved by 0.0786171

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.431
ELB improved by 0.0680775

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.371
ELB improved by 0.0590794

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.32
ELB improved by 0.0511383

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.276
ELB improved by 0.0440158

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.239
ELB improved by 0.0376415

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.207
ELB improved by 0.0320241

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.179
ELB improved by 0.0271781

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.156
ELB improved by 0.0230844

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.137
ELB improved by 0.0196838

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.12
ELB improved by 0.0168896

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.105
ELB improved by 0.0146054

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.092
ELB improved by 0.0127383

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.081
ELB improved by 0.0112069

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.00994356

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-871.339
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.751
ELB improved by 304.587

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.058
ELB improved by 57.693

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.34
ELB improved by 35.7184

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.547
ELB improved by 15.7933

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.598
ELB improved by 6.94838

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.571
ELB improved by 5.02746

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.908
ELB improved by 4.6631

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.273
ELB improved by 4.63477

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.527
ELB improved by 4.74553

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.628
ELB improved by 4.89921

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.683
ELB improved by 4.94526

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.057
ELB improved by 4.62607

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.324
ELB improved by 3.73317

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.784
ELB improved by 2.53993

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.231
ELB improved by 1.55313

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.291
ELB improved by 0.940163

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.687
ELB improved by 0.603186

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.268
ELB improved by 0.419203

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.955
ELB improved by 0.313078

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.708
ELB improved by 0.246915

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.506
ELB improved by 0.202407

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.335
ELB improved by 0.170543

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.189
ELB improved by 0.146645

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.06
ELB improved by 0.128112

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.947
ELB improved by 0.113386

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.846
ELB improved by 0.101467

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.754
ELB improved by 0.0916817

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.083553

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.0767328

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.523
ELB improved by 0.0709598

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.457
ELB improved by 0.0660338

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.395
ELB improved by 0.0617988

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.337
ELB improved by 0.0581313

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.282
ELB improved by 0.0549324

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.23
ELB improved by 0.0521223

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.18
ELB improved by 0.0496358

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.133
ELB improved by 0.0474193

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.087
ELB improved by 0.0454285

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.044
ELB improved by 0.0436265

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.002
ELB improved by 0.0419828

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.961
ELB improved by 0.0404715

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.922
ELB improved by 0.0390714

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.884
ELB improved by 0.0377645

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.848
ELB improved by 0.0365357

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.812
ELB improved by 0.0353729

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.778
ELB improved by 0.0342657

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.745
ELB improved by 0.0332057

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.713
ELB improved by 0.0321863

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.681
ELB improved by 0.0312019

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.651
ELB improved by 0.0302484

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.622
ELB improved by 0.0293223

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.593
ELB improved by 0.0284213

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.566
ELB improved by 0.0275436

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.539
ELB improved by 0.026688

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.513
ELB improved by 0.0258536

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.488
ELB improved by 0.02504

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.464
ELB improved by 0.0242471

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.441
ELB improved by 0.023475

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.418
ELB improved by 0.0227238

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.396
ELB improved by 0.0219937

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.375
ELB improved by 0.0212851

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.354
ELB improved by 0.0205984

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.334
ELB improved by 0.0199337

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.315
ELB improved by 0.0192913

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.296
ELB improved by 0.0186714

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.278
ELB improved by 0.0180742

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.261
ELB improved by 0.0174998

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.244
ELB improved by 0.016948

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.227
ELB improved by 0.0164188

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.211
ELB improved by 0.0159121

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.196
ELB improved by 0.0154275

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.181
ELB improved by 0.0149649

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.166
ELB improved by 0.0145237

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.152
ELB improved by 0.0141037

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.139
ELB improved by 0.0137044

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.0133253

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.112
ELB improved by 0.0129658

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.1
ELB improved by 0.0126254

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.087
ELB improved by 0.0123035

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.075
ELB improved by 0.0119996

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.064
ELB improved by 0.011713

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.052
ELB improved by 0.0114433

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.041
ELB improved by 0.0111897

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.03
ELB improved by 0.0109518

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.019
ELB improved by 0.0107289

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.009
ELB improved by 0.0105205

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.998
ELB improved by 0.0103261

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.988
ELB improved by 0.0101452

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.978
ELB improved by 0.00997723

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.202   0.182   2.372 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0580.0130.071
getPIPs0.0490.0140.063
graper0.0850.0150.100
makeExampleData0.0100.0010.010
makeExampleDataWithUnequalGroups0.0120.0010.013
plotELBO0.3400.0140.355
plotGroupPenalties1.1230.0561.178
plotPosterior0.6470.0140.662
predict.graper2.0680.0782.145
print.graper0.0500.0140.063