Build/check report for BioC 3.23 - CHECK results for graper on nebbiolo1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 RC (2026-04-17 r89917) -- "Because it was There"	4995
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.28.0

Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz

StartedAt: 2026-05-19 00:44:08 -0400 (Tue, 19 May 2026)

EndedAt: 2026-05-19 00:45:40 -0400 (Tue, 19 May 2026)

EllapsedTime: 92.2 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-19 04:44:08 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.28.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.28.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.871
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.863
ELB improved by 278.008

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.017
ELB improved by 58.8455

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.47
ELB improved by 38.5478

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.816
ELB improved by 17.6531

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.895
ELB improved by 6.92168

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.151
ELB improved by 3.74345

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.266
ELB improved by 2.88539

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.685
ELB improved by 2.58117

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.205
ELB improved by 2.47992

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.727
ELB improved by 2.47794

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.179
ELB improved by 2.54753

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.491
ELB improved by 2.68816

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.584
ELB improved by 2.90691

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.389
ELB improved by 3.19523

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.91
ELB improved by 3.47885

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.341
ELB improved by 3.5688

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.092
ELB improved by 3.24968

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.562
ELB improved by 2.52954

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.852
ELB improved by 1.71032

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.768
ELB improved by 1.08372

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.064
ELB improved by 0.704321

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.572
ELB improved by 0.49166

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.206
ELB improved by 0.366354

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.921
ELB improved by 0.284631

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.694
ELB improved by 0.227497

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.507
ELB improved by 0.18643

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.351
ELB improved by 0.156271

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.218
ELB improved by 0.133427

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.102
ELB improved by 0.115528

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.001
ELB improved by 0.101095

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.912
ELB improved by 0.089205

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.832
ELB improved by 0.0792587

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.762
ELB improved by 0.0708437

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.698
ELB improved by 0.0636617

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.64
ELB improved by 0.0574883

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.588
ELB improved by 0.0521503

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.541
ELB improved by 0.0475105

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.497
ELB improved by 0.0434595

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.457
ELB improved by 0.0399083

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.421
ELB improved by 0.0367841

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.387
ELB improved by 0.034027

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.355
ELB improved by 0.0315872

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.326
ELB improved by 0.0294228

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.298
ELB improved by 0.0274989

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.272
ELB improved by 0.0257858

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.248
ELB improved by 0.0242581

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.225
ELB improved by 0.0228945

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.203
ELB improved by 0.0216764

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.183
ELB improved by 0.020588

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.163
ELB improved by 0.0196156

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.145
ELB improved by 0.0187472

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.127
ELB improved by 0.0179727

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.109
ELB improved by 0.017283

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.093
ELB improved by 0.0166705

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.076
ELB improved by 0.0161282

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.061
ELB improved by 0.0156504

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.046
ELB improved by 0.0152318

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.031
ELB improved by 0.014868

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.016
ELB improved by 0.0145552

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.002
ELB improved by 0.0142899

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.988
ELB improved by 0.0140695

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.974
ELB improved by 0.0138914

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.96
ELB improved by 0.0137537

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.946
ELB improved by 0.0136548

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.933
ELB improved by 0.0135933

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.919
ELB improved by 0.0135684

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.906
ELB improved by 0.0135794

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.892
ELB improved by 0.013626

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.878
ELB improved by 0.0137083

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.865
ELB improved by 0.0138266

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.851
ELB improved by 0.0139816

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.836
ELB improved by 0.0141741

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.822
ELB improved by 0.0144057

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.807
ELB improved by 0.014678

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.792
ELB improved by 0.0149932

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.777
ELB improved by 0.0153539

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.761
ELB improved by 0.0157632

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.745
ELB improved by 0.0162248

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.728
ELB improved by 0.016743

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.711
ELB improved by 0.0173228

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.693
ELB improved by 0.0179703

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.674
ELB improved by 0.0186923

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.655
ELB improved by 0.019497

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.634
ELB improved by 0.0203939

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.613
ELB improved by 0.0213944

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.59
ELB improved by 0.0225119

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.567
ELB improved by 0.0237624

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.542
ELB improved by 0.0251655

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.515
ELB improved by 0.0267446

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.486
ELB improved by 0.0285291

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.456
ELB improved by 0.0305554

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.423
ELB improved by 0.0328699

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.387
ELB improved by 0.035532

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.349
ELB improved by 0.0386196

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.306
ELB improved by 0.0422358

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.26
ELB improved by 0.0465188

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.208
ELB improved by 0.051655

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.15
ELB improved by 0.0578939

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.085
ELB improved by 0.0655613

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.01
ELB improved by 0.0750537

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.923
ELB improved by 0.0867793

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.822
ELB improved by 0.100981

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.705
ELB improved by 0.117382

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.57
ELB improved by 0.134759

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.419
ELB improved by 0.150872

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.256
ELB improved by 0.163294

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.085
ELB improved by 0.170712

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.912
ELB improved by 0.173393

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.739
ELB improved by 0.172478

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.57
ELB improved by 0.16915

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.406
ELB improved by 0.164325

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.247
ELB improved by 0.158683

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.094
ELB improved by 0.152731

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.947
ELB improved by 0.146835

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.806
ELB improved by 0.141201

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.67
ELB improved by 0.135829

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.54
ELB improved by 0.130445

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.415
ELB improved by 0.124455

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.298
ELB improved by 0.117082

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.191
ELB improved by 0.107788

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.094
ELB improved by 0.0967528

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.009
ELB improved by 0.084909

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.936
ELB improved by 0.0734058

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.873
ELB improved by 0.0630388

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.818
ELB improved by 0.0541003

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.772
ELB improved by 0.0465497

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.732
ELB improved by 0.0402183

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.697
ELB improved by 0.0349227

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.666
ELB improved by 0.0305023

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.639
ELB improved by 0.0268233

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.616
ELB improved by 0.0237742

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.594
ELB improved by 0.0212609

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.575
ELB improved by 0.019204

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.558
ELB improved by 0.0175352

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.541
ELB improved by 0.0161955

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.526
ELB improved by 0.0151329

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.512
ELB improved by 0.0142998

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.498
ELB improved by 0.0136513

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.485
ELB improved by 0.0131437

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.472
ELB improved by 0.0127338

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.46
ELB improved by 0.0123796

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.448
ELB improved by 0.0120419

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.436
ELB improved by 0.011688

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.425
ELB improved by 0.011294

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.414
ELB improved by 0.0108471

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.404
ELB improved by 0.0103456

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.394
ELB improved by 0.009797

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-824.153
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.838
ELB improved by 241.315

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.872
ELB improved by 62.9664

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.099
ELB improved by 51.773

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.253
ELB improved by 26.8461

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.349
ELB improved by 9.90327

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.721
ELB improved by 4.628

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.457
ELB improved by 3.26456

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.65
ELB improved by 2.8068

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.999
ELB improved by 2.65104

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.386
ELB improved by 2.61331

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.776
ELB improved by 2.60958

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.178
ELB improved by 2.59826

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.631
ELB improved by 2.54629

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.22
ELB improved by 2.41178

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.063
ELB improved by 2.15695

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.275
ELB improved by 1.78741

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.906
ELB improved by 1.36967

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.916
ELB improved by 0.989862

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.217
ELB improved by 0.69845

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.719
ELB improved by 0.498588

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.35
ELB improved by 0.368735

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.065
ELB improved by 0.284769

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.836
ELB improved by 0.228907

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.646
ELB improved by 0.190087

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.484
ELB improved by 0.161859

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.344
ELB improved by 0.140482

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.22
ELB improved by 0.123724

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.11
ELB improved by 0.110188

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.011
ELB improved by 0.0989564

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.922
ELB improved by 0.0894045

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.841
ELB improved by 0.081097

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.767
ELB improved by 0.0737354

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.7
ELB improved by 0.067124

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.639
ELB improved by 0.0611432

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.583
ELB improved by 0.0557237

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.532
ELB improved by 0.0508243

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.486
ELB improved by 0.0464137

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.443
ELB improved by 0.0424598

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.404
ELB improved by 0.0389262

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.368
ELB improved by 0.0357726

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.335
ELB improved by 0.0329576

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.305
ELB improved by 0.0304411

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.277
ELB improved by 0.0281863

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.251
ELB improved by 0.0261606

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.226
ELB improved by 0.0243356

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.204
ELB improved by 0.022687

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.182
ELB improved by 0.0211939

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.163
ELB improved by 0.0198386

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.144
ELB improved by 0.0186057

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.127
ELB improved by 0.0174821

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.11
ELB improved by 0.0164564

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.095
ELB improved by 0.0155185

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.08
ELB improved by 0.0146597

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.066
ELB improved by 0.0138724

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.053
ELB improved by 0.0131498

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.04
ELB improved by 0.0124857

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.029
ELB improved by 0.0118749

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.017
ELB improved by 0.0113126

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.006
ELB improved by 0.0107944

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.996
ELB improved by 0.0103166

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.986
ELB improved by 0.00987561

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-852.124
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.415
ELB improved by 263.71

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.267
ELB improved by 57.1475

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.296
ELB improved by 43.9711

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.874
ELB improved by 22.4219

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.222
ELB improved by 8.65177

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.711
ELB improved by 5.51153

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.272
ELB improved by 5.43842

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.026
ELB improved by 6.24591

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.72
ELB improved by 7.30609

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.856
ELB improved by 7.86445

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.743
ELB improved by 7.11257

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.443
ELB improved by 5.30048

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.883
ELB improved by 3.5595

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.553
ELB improved by 2.33011

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.103
ELB improved by 1.45001

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.189
ELB improved by 0.914128

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.554
ELB improved by 0.634899

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.064
ELB improved by 0.490193

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.655
ELB improved by 0.408965

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.297
ELB improved by 0.358542

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.972
ELB improved by 0.324394

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.672
ELB improved by 0.29977

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.391
ELB improved by 0.281321

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.124
ELB improved by 0.267256

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.867
ELB improved by 0.256509

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.619
ELB improved by 0.248356

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.377
ELB improved by 0.242271

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.139
ELB improved by 0.237859

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.904
ELB improved by 0.234826

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.671
ELB improved by 0.232956

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.439
ELB improved by 0.232088

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.207
ELB improved by 0.232119

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.974
ELB improved by 0.233047

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.739
ELB improved by 0.235091

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.5
ELB improved by 0.239004

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.253
ELB improved by 0.2467

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.99
ELB improved by 0.262542

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.694
ELB improved by 0.295988

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.328
ELB improved by 0.366243

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.825
ELB improved by 0.502945

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.122
ELB improved by 0.703756

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.293
ELB improved by 0.828937

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.491
ELB improved by 0.801832

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.678
ELB improved by 0.813102

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.699
ELB improved by 0.97828

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.365
ELB improved by 1.33418

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.657
ELB improved by 1.70817

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.053
ELB improved by 1.60417

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.797
ELB improved by 1.25617

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.863
ELB improved by 0.933222

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.196
ELB improved by 0.667087

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.732
ELB improved by 0.464704

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.407
ELB improved by 0.32462

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.173
ELB improved by 0.233913

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.997
ELB improved by 0.175931

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.86
ELB improved by 0.137654

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.748
ELB improved by 0.111395

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.655
ELB improved by 0.0934913

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.572
ELB improved by 0.0827299

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.492
ELB improved by 0.0797472

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.404
ELB improved by 0.0877061

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.29
ELB improved by 0.114054

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.121
ELB improved by 0.169224

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.878
ELB improved by 0.243544

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.604
ELB improved by 0.273528

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.374
ELB improved by 0.229767

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.203
ELB improved by 0.171462

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.073
ELB improved by 0.129495

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.972
ELB improved by 0.10102

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.892
ELB improved by 0.0804803

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.828
ELB improved by 0.0639137

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.779
ELB improved by 0.0493422

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.742
ELB improved by 0.0368435

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.715
ELB improved by 0.0271296

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.694
ELB improved by 0.0202782

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.679
ELB improved by 0.0157009

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.666
ELB improved by 0.0126585

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.655
ELB improved by 0.0105766

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.646
ELB improved by 0.00908924

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.114
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-557.677
ELB improved by 283.437

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.407
ELB improved by 59.2696

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.898
ELB improved by 37.5099

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.255
ELB improved by 16.6424

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.834
ELB improved by 7.42099

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.107
ELB improved by 4.72746

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.102
ELB improved by 4.00465

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.332
ELB improved by 3.77013

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.674
ELB improved by 3.65814

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.181
ELB improved by 3.49314

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.017
ELB improved by 3.16353

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.372
ELB improved by 2.64486

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.335
ELB improved by 2.03753

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.839
ELB improved by 1.49534

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.75
ELB improved by 1.0893

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.955
ELB improved by 0.79482

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.376
ELB improved by 0.579216

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.947
ELB improved by 0.429141

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.616
ELB improved by 0.330543

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.35
ELB improved by 0.266724

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.224363

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.93
ELB improved by 0.194933

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.757
ELB improved by 0.173471

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.6
ELB improved by 0.157154

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.455
ELB improved by 0.144338

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.321
ELB improved by 0.134016

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.196
ELB improved by 0.125528

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.077
ELB improved by 0.118416

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.965
ELB improved by 0.112348

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.858
ELB improved by 0.107083

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.756
ELB improved by 0.102453

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.657
ELB improved by 0.0983443

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.563
ELB improved by 0.094683

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.471
ELB improved by 0.0914157

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.383
ELB improved by 0.0884933

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.297
ELB improved by 0.0858631

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.213
ELB improved by 0.0834683

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.132
ELB improved by 0.0812519

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.053
ELB improved by 0.0791621

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.976
ELB improved by 0.0771558

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.901
ELB improved by 0.0751999

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.827
ELB improved by 0.0732714

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.756
ELB improved by 0.0713554

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.686
ELB improved by 0.0694438

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.619
ELB improved by 0.0675332

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.553
ELB improved by 0.0656238

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.49
ELB improved by 0.0637178

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.428
ELB improved by 0.0618187

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.368
ELB improved by 0.0599303

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.31
ELB improved by 0.0580562

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.254
ELB improved by 0.0561997

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.199
ELB improved by 0.0543634

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.147
ELB improved by 0.0525494

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.096
ELB improved by 0.050759

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.047
ELB improved by 0.0489931

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401
ELB improved by 0.0472526

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.954
ELB improved by 0.045538

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.91
ELB improved by 0.04385

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.868
ELB improved by 0.0421895

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.828
ELB improved by 0.0405578

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.789
ELB improved by 0.0389565

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.751
ELB improved by 0.037388

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.715
ELB improved by 0.0358547

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.681
ELB improved by 0.0343598

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.648
ELB improved by 0.0329064

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.617
ELB improved by 0.0314983

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.586
ELB improved by 0.0301392

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.558
ELB improved by 0.0288326

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.53
ELB improved by 0.0275823

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.504
ELB improved by 0.0263916

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.478
ELB improved by 0.0252638

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.454
ELB improved by 0.0242017

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.431
ELB improved by 0.0232078

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.409
ELB improved by 0.0222843

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.387
ELB improved by 0.0214331

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.367
ELB improved by 0.0206557

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.347
ELB improved by 0.0199536

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.327
ELB improved by 0.019328

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.309
ELB improved by 0.0187803

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.29
ELB improved by 0.0183122

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.272
ELB improved by 0.0179259

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.255
ELB improved by 0.0176248

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.237
ELB improved by 0.0174135

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.22
ELB improved by 0.0172994

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.203
ELB improved by 0.0172934

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.185
ELB improved by 0.0174119

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.168
ELB improved by 0.01768

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.149
ELB improved by 0.0181361

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.131
ELB improved by 0.0188397

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.111
ELB improved by 0.0198844

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.089
ELB improved by 0.0214199

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.066
ELB improved by 0.0236897

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.038
ELB improved by 0.0270963

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.006
ELB improved by 0.0323058

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.966
ELB improved by 0.0403992

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.913
ELB improved by 0.0530061

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.841
ELB improved by 0.0721669

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.741
ELB improved by 0.0994394

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.607
ELB improved by 0.134555

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.43
ELB improved by 0.176775

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.198
ELB improved by 0.231568

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.88
ELB improved by 0.318635

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.404
ELB improved by 0.475902

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.711
ELB improved by 0.692431

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.946
ELB improved by 0.765289

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.307
ELB improved by 0.638772

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.809
ELB improved by 0.498037

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.38
ELB improved by 0.428979

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.942
ELB improved by 0.438124

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.512
ELB improved by 0.430299

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.229
ELB improved by 0.282333

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.089
ELB improved by 0.140022

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.01
ELB improved by 0.0791599

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.958
ELB improved by 0.0520626

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.922
ELB improved by 0.0364708

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.895
ELB improved by 0.0265099

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.875
ELB improved by 0.0199153

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.86
ELB improved by 0.0154541

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.847
ELB improved by 0.0123767

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.837
ELB improved by 0.0102108

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.829
ELB improved by 0.00865367

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.465   0.219   2.673

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.053	0.019	0.071
getPIPs	0.068	0.056	0.122
graper	0.083	0.019	0.104
makeExampleData	0.009	0.000	0.011
makeExampleDataWithUnequalGroups	0.011	0.001	0.014
plotELBO	0.307	0.032	0.339
plotGroupPenalties	0.963	0.012	0.974
plotPosterior	0.651	0.013	0.663
predict.graper	2.073	0.081	2.155
print.graper	0.049	0.013	0.061