Back to Multiple platform build/check report for BioC 3.20:   simplified   long
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This page was generated on 2024-12-23 12:03 -0500 (Mon, 23 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4744
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4487
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4515
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4467
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1948/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.64.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2024-12-19 13:00 -0500 (Thu, 19 Dec 2024)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: RELEASE_3_20
git_last_commit: 88fd3ab
git_last_commit_date: 2024-10-29 09:29:09 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64
0028
0028
20521
palomino8Windows Server 2022 Datacenter / x64
0324
1323
00518
0023
merida1macOS 12.7.5 Monterey / x86_64
0027
1125
00520
0025
kjohnson1macOS 13.6.6 Ventura / arm64
0027
0126
00521
0026
Package 1/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.28.0  (landing page)
Eivind Valen
git_last_commit: 67f2ecd
git_last_commit_date: 2024-10-29 10:22:13 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 2/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.30.0  (landing page)
Thomas Carroll
git_last_commit: aa293f7
git_last_commit_date: 2024-10-29 10:18:46 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 3/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.44.0  (landing page)
Kemal Akman
git_last_commit: 8cb1962
git_last_commit_date: 2024-10-29 09:49:50 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 4/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.12.0  (landing page)
Wenjie Sun
git_last_commit: d63a174
git_last_commit_date: 2024-10-29 11:06:31 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 5/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.56.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: bb61f21
git_last_commit_date: 2024-10-29 09:31:39 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 6/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.60.0  (landing page)
Peter Humburg
git_last_commit: b1707e5
git_last_commit_date: 2024-10-29 09:32:34 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 7/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.60.0  (landing page)
Peter Humburg
git_last_commit: 7461e09
git_last_commit_date: 2024-10-29 09:32:07 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 8/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.8.0  (landing page)
Jianqiang Sun
git_last_commit: 710288a
git_last_commit_date: 2024-10-29 11:14:51 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 9/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.34.0  (landing page)
Benjamin Callahan
git_last_commit: 5d453a4
git_last_commit_date: 2024-10-29 10:07:42 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 10/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.42.0  (landing page)
Nicolas Delhomme
git_last_commit: bc77aca
git_last_commit_date: 2024-10-29 09:39:50 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 11/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.40.0  (landing page)
Davide Risso
git_last_commit: fdb405f
git_last_commit_date: 2024-10-29 09:38:27 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 12/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.28.0  (landing page)
Zheng Wei
git_last_commit: 25abdd5
git_last_commit_date: 2024-10-29 10:24:06 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  NO, package depends on 'TFBSTools' which is only available as a source package that needs compilation
Package 13/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.24.0  (landing page)
Leandro Roser
git_last_commit: 886d112
git_last_commit_date: 2024-10-29 10:29:02 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 14/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
girafe 1.58.0  (landing page)
J. Toedling
git_last_commit: ff75045
git_last_commit_date: 2024-10-29 09:33:36 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 15/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.42.0  (landing page)
Borbala Mifsud
git_last_commit: 66ddb69
git_last_commit_date: 2024-10-29 10:38:22 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 16/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSeqGenie 4.36.0  (landing page)
Jens Reeder
git_last_commit: 0d8daab
git_last_commit_date: 2024-10-29 09:43:08 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    TIMEOUT  
palomino8Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
merida1macOS 12.7.5 Monterey / x86_64... NOT SUPPORTED ...
kjohnson1macOS 13.6.6 Ventura / arm64... NOT SUPPORTED ...
Package 17/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.24.0  (landing page)
Vivek Bhardwaj
git_last_commit: 65dfe81
git_last_commit_date: 2024-10-29 10:29:24 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 18/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.30.0  (landing page)
Mike Smith
git_last_commit: 7cd9446
git_last_commit_date: 2024-10-29 10:02:02 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 19/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.38.0  (landing page)
Alba Sala
git_last_commit: 7d102b1
git_last_commit_date: 2024-10-29 09:37:44 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 20/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.56.0  (landing page)
Daniel Beck
git_last_commit: 36f950e
git_last_commit_date: 2024-10-29 09:34:46 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 21/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.46.0  (landing page)
Michael Stadler
git_last_commit: 35eb1d4
git_last_commit_date: 2024-10-29 09:44:04 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 22/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.56.0  (landing page)
Hans-Ulrich Klein
git_last_commit: bf27f3f
git_last_commit_date: 2024-10-29 09:35:04 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 23/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.40.0  (landing page)
Welliton Souza
git_last_commit: 956d2d1
git_last_commit_date: 2024-10-29 09:56:33 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 24/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.46.0  (landing page)
Christoph Bartenhagen
git_last_commit: 38de341
git_last_commit_date: 2024-10-29 09:43:56 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 25/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.24.0  (landing page)
Zhe Wang
git_last_commit: 5344b5e
git_last_commit_date: 2024-10-29 10:30:01 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 26/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.40.0  (landing page)
Samuel Granjeaud
git_last_commit: 310dbb9
git_last_commit_date: 2024-10-29 09:33:24 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    TIMEOUT  
palomino8Windows Server 2022 Datacenter / x64  OK    TIMEOUT  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    TIMEOUT  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 27/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.12.0  (landing page)
Thomas Girke
git_last_commit: 1895b29
git_last_commit_date: 2024-10-29 09:54:41 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 28/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.16.0  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: d4dd5a4
git_last_commit_date: 2024-10-29 10:49:18 -0500
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped