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This page was generated on 2024-11-20 12:07 -0500 (Wed, 20 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4481
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4479
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4359
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4539
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4493
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 965/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HilbertVisGUI 1.64.0  (landing page)
Simon Anders
Snapshot Date: 2024-11-19 13:40 -0500 (Tue, 19 Nov 2024)
git_url: https://git.bioconductor.org/packages/HilbertVisGUI
git_branch: RELEASE_3_20
git_last_commit: c5ebbd3
git_last_commit_date: 2024-10-29 09:30:32 -0500 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  
palomino8Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
lconwaymacOS 12.7.1 Monterey / x86_64... NOT SUPPORTED ...
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  ERROR    ERROR  skipped


INSTALL results for HilbertVisGUI on kunpeng2

To the developers/maintainers of the HilbertVisGUI package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HilbertVisGUI.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: HilbertVisGUI
Version: 1.64.0
Command: /home/biocbuild/R/R/bin/R CMD INSTALL HilbertVisGUI
StartedAt: 2024-11-19 20:30:02 -0000 (Tue, 19 Nov 2024)
EndedAt: 2024-11-19 20:30:39 -0000 (Tue, 19 Nov 2024)
EllapsedTime: 37.0 seconds
RetCode: 1
Status:   ERROR  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL HilbertVisGUI
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’
* installing *source* package ‘HilbertVisGUI’ ...
** using staged installation
Checking for pkg-config... /usr/bin/pkg-config
Checking for gtkmm-2.4... found: version 2.24.5
** libs
using C compiler: ‘gcc (conda-forge gcc 14.2.0-1) 14.2.0’
using C++ compiler: ‘g++ (conda-forge gcc 14.2.0-1) 14.2.0’
gcc -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI  -I/usr/local/include   `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI -fPIC  -g -O2  -Wall -c R_env_prot.c -o R_env_prot.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI  -I/usr/local/include    -fPIC  -g -O2  -Wall  -c R_interface.cc -o R_interface.o
In file included from /usr/include/cairomm-1.0/cairomm/enums.h:23,
                 from /usr/include/cairomm-1.0/cairomm/fontoptions.h:22,
                 from /usr/include/gdkmm-2.4/gdkmm/screen.h:36,
                 from /usr/include/gdkmm-2.4/gdkmm.h:27,
                 from /usr/include/gtkmm-2.4/gtkmm.h:89,
                 from display.h:7,
                 from R_interface.cc:8:
/usr/include/cairo/cairo-ft.h:50:10: fatal error: fontconfig/fontconfig.h: No such file or directory
   50 | #include <fontconfig/fontconfig.h>
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make: *** [/home/biocbuild/R/R-4.4.1/etc/Makeconf:202: R_interface.o] Error 1
ERROR: compilation failed for package ‘HilbertVisGUI’
* removing ‘/home/biocbuild/R/R-4.4.1/site-library/HilbertVisGUI’
* restoring previous ‘/home/biocbuild/R/R-4.4.1/site-library/HilbertVisGUI’