Simon Anders
| Snapshot Date: 2024-11-19 13:40 -0500 (Tue, 19 Nov 2024) |
| git_url: https://git.bioconductor.org/packages/HilbertVisGUI |
| git_branch: RELEASE_3_20 |
| git_last_commit: c5ebbd3 |
| git_last_commit_date: 2024-10-29 09:30:32 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-11-20 12:07 -0500 (Wed, 20 Nov 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4481 |
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4479 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4359 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4539 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 965/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HilbertVisGUI 1.64.0 (landing page) Simon Anders
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | ... NOT SUPPORTED ... | ||||||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ... NOT SUPPORTED ... | ||||||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | ERROR | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the HilbertVisGUI package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HilbertVisGUI.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: HilbertVisGUI |
| Version: 1.64.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data HilbertVisGUI |
| StartedAt: 2024-11-20 01:24:09 -0000 (Wed, 20 Nov 2024) |
| EndedAt: 2024-11-20 01:24:12 -0000 (Wed, 20 Nov 2024) |
| EllapsedTime: 3.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data HilbertVisGUI
###
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* checking for file ‘HilbertVisGUI/DESCRIPTION’ ... OK
* preparing ‘HilbertVisGUI’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘HilbertVisGUI’ ...
** using staged installation
Checking for pkg-config... /usr/bin/pkg-config
Checking for gtkmm-2.4... found: version 2.24.5
** libs
using C compiler: ‘gcc (conda-forge gcc 14.2.0-1) 14.2.0’
using C++ compiler: ‘g++ (conda-forge gcc 14.2.0-1) 14.2.0’
gcc -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI -I/usr/local/include `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI -fPIC -g -O2 -Wall -c R_env_prot.c -o R_env_prot.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG `pkg-config gtkmm-2.4 --cflags` -DSO_NAME=HilbertVisGUI -DSO_NAME=HilbertVisGUI -I/usr/local/include -fPIC -g -O2 -Wall -c R_interface.cc -o R_interface.o
In file included from /usr/include/cairomm-1.0/cairomm/enums.h:23,
from /usr/include/cairomm-1.0/cairomm/fontoptions.h:22,
from /usr/include/gdkmm-2.4/gdkmm/screen.h:36,
from /usr/include/gdkmm-2.4/gdkmm.h:27,
from /usr/include/gtkmm-2.4/gtkmm.h:89,
from display.h:7,
from R_interface.cc:8:
/usr/include/cairo/cairo-ft.h:50:10: fatal error: fontconfig/fontconfig.h: No such file or directory
50 | #include <fontconfig/fontconfig.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make: *** [/home/biocbuild/R/R-4.4.1/etc/Makeconf:202: R_interface.o] Error 1
ERROR: compilation failed for package ‘HilbertVisGUI’
* removing ‘/home/biocbuild/tmp/RtmpfxdGas/Rinst231b9d63fd3d7f/HilbertVisGUI’
-----------------------------------
ERROR: package installation failed