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This page was generated on 2025-08-18 15:58 -0400 (Mon, 18 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 916
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Package 168/229HostnameOS / ArchINSTALLBUILDCHECK
QFeatures 1.19.2  (landing page)
Laurent Gatto
Snapshot Date: 2025-08-18 12:00 -0400 (Mon, 18 Aug 2025)
git_url: https://git.bioconductor.org/packages/QFeatures
git_branch: devel
git_last_commit: cc6781d
git_last_commit_date: 2025-05-26 12:56:00 -0400 (Mon, 26 May 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for QFeatures on teran2

To the developers/maintainers of the QFeatures package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: QFeatures
Version: 1.19.2
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data QFeatures
StartedAt: 2025-08-18 13:16:22 -0400 (Mon, 18 Aug 2025)
EndedAt: 2025-08-18 13:17:33 -0400 (Mon, 18 Aug 2025)
EllapsedTime: 70.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data QFeatures
###
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* checking for file ‘QFeatures/DESCRIPTION’ ... OK
* preparing ‘QFeatures’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Processing.Rmd’ using rmarkdown
--- finished re-building ‘Processing.Rmd’

--- re-building ‘QFeatures.Rmd’ using rmarkdown
--- finished re-building ‘QFeatures.Rmd’

--- re-building ‘Visualization.Rmd’ using rmarkdown

Quitting from Visualization.Rmd:182-192 [longForm]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `.matchAddColData()`:
! argument "check.names" is missing, with no default
---
Backtrace:
    ▆
 1. ├─BiocGenerics::longForm(...)
 2. └─QFeatures::longForm(...)
 3.   └─QFeatures (local) .local(object, ...)
 4.     └─QFeatures:::longFormQFeatures(object, colvars, rowvars, i)
 5.       ├─MultiAssayExperiment::longForm(...)
 6.       └─MultiAssayExperiment::longForm(...)
 7.         └─MultiAssayExperiment (local) .local(object, ...)
 8.           └─MultiAssayExperiment:::.matchAddColData(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Visualization.Rmd' failed with diagnostics:
argument "check.names" is missing, with no default
--- failed re-building ‘Visualization.Rmd’

--- re-building ‘read_QFeatures.Rmd’ using rmarkdown
--- finished re-building ‘read_QFeatures.Rmd’

SUMMARY: processing the following file failed:
  ‘Visualization.Rmd’

Error: Vignette re-building failed.
Execution halted