Back to Multiple platform build/check report for BioC 3.21:   simplified   long
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

This page was generated on 2025-02-03 12:38 -0500 (Mon, 03 Feb 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 4704
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" 4467
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2025-01-22 r87618) -- "Unsuffered Consequences" 4478
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1546/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phyloseq 1.51.0  (landing page)
Paul J. McMurdie
Snapshot Date: 2025-02-02 13:40 -0500 (Sun, 02 Feb 2025)
git_url: https://git.bioconductor.org/packages/phyloseq
git_branch: devel
git_last_commit: fca5959
git_last_commit_date: 2024-10-29 09:40:05 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


BUILD results for phyloseq on palomino7

To the developers/maintainers of the phyloseq package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phyloseq.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: phyloseq
Version: 1.51.0
Command: chmod a+r phyloseq -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data phyloseq
StartedAt: 2025-02-02 20:42:48 -0500 (Sun, 02 Feb 2025)
EndedAt: 2025-02-02 20:49:41 -0500 (Sun, 02 Feb 2025)
EllapsedTime: 413.1 seconds
RetCode: 0
Status:   OK  
PackageFile: phyloseq_1.51.0.tar.gz
PackageFileSize: 4.036 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r phyloseq -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data phyloseq
###
##############################################################################
##############################################################################


* checking for file 'phyloseq/DESCRIPTION' ... OK
* preparing 'phyloseq':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'phyloseq_1.51.0.tar.gz'