Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-08-18 12:05 -0400 (Mon, 18 Aug 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4596 |
kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4538 |
taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1432/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
netZooR 1.13.19 (landing page) Marouen Ben Guebila
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
To the developers/maintainers of the netZooR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netZooR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: netZooR |
Version: 1.13.19 |
Command: rm -rf netZooR.buildbin-libdir && mkdir netZooR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh netZooR_1.13.19.tar.gz /Library/Frameworks/R.framework/Resources/bin/R netZooR.buildbin-libdir |
StartedAt: 2025-08-18 01:13:19 -0400 (Mon, 18 Aug 2025) |
EndedAt: 2025-08-18 01:14:49 -0400 (Mon, 18 Aug 2025) |
EllapsedTime: 90.0 seconds |
RetCode: 0 |
Status: OK |
PackageFile: netZooR_1.13.19.tgz |
PackageFileSize: 6.726 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf netZooR.buildbin-libdir && mkdir netZooR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh netZooR_1.13.19.tar.gz /Library/Frameworks/R.framework/Resources/bin/R netZooR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=netZooR.buildbin-libdir netZooR_1.13.19.tar.gz' >>>>>>> * installing *source* package ‘netZooR’ ... ** this is package ‘netZooR’ version ‘1.13.19’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading --2025-08-18 01:13:46-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/skin.rdata Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.132.248, 3.5.128.154, 52.219.102.42, ... Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.132.248|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 1596768 (1.5M) [binary/octet-stream] Saving to: ‘skin.rdata’ 0K .......... .......... .......... .......... .......... 3% 1.85M 1s 50K .......... .......... .......... .......... .......... 6% 1.88M 1s 100K .......... .......... .......... .......... .......... 9% 59.3M 0s 150K .......... .......... .......... .......... .......... 12% 1.95M 1s 200K .......... .......... .......... .......... .......... 16% 59.0M 0s 250K .......... .......... .......... .......... .......... 19% 70.9M 0s 300K .......... .......... .......... .......... .......... 22% 65.3M 0s 350K .......... .......... .......... .......... .......... 25% 1.96M 0s 400K .......... .......... .......... .......... .......... 28% 67.8M 0s 450K .......... .......... .......... .......... .......... 32% 78.9M 0s 500K .......... .......... .......... .......... .......... 35% 62.1M 0s 550K .......... .......... .......... .......... .......... 38% 68.6M 0s 600K .......... .......... .......... .......... .......... 41% 69.3M 0s 650K .......... .......... .......... .......... .......... 44% 68.0M 0s 700K .......... .......... .......... .......... .......... 48% 90.4M 0s 750K .......... .......... .......... .......... .......... 51% 2.12M 0s 800K .......... .......... .......... .......... .......... 54% 77.5M 0s 850K .......... .......... .......... .......... .......... 57% 66.0M 0s 900K .......... .......... .......... .......... .......... 60% 63.9M 0s 950K .......... .......... .......... .......... .......... 64% 70.4M 0s 1000K .......... .......... .......... .......... .......... 67% 72.7M 0s 1050K .......... .......... .......... .......... .......... 70% 65.8M 0s 1100K .......... .......... .......... .......... .......... 73% 73.0M 0s 1150K .......... .......... .......... .......... .......... 76% 82.3M 0s 1200K .......... .......... .......... .......... .......... 80% 93.4M 0s 1250K .......... .......... .......... .......... .......... 83% 61.6M 0s 1300K .......... .......... .......... .......... .......... 86% 67.9M 0s 1350K .......... .......... .......... .......... .......... 89% 65.8M 0s 1400K .......... .......... .......... .......... .......... 92% 64.8M 0s 1450K .......... .......... .......... .......... .......... 96% 58.9M 0s 1500K .......... .......... .......... .......... .......... 99% 55.0M 0s 1550K ......... 100% 187K=0.1s 2025-08-18 01:13:47 (10.6 MB/s) - ‘skin.rdata’ saved [1596768/1596768] --2025-08-18 01:13:47-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/bladder.rdata Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.128.11, 3.5.128.154, 52.219.102.42, ... Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.128.11|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 1155612 (1.1M) [binary/octet-stream] Saving to: ‘bladder.rdata’ 0K .......... .......... .......... .......... .......... 4% 1.84M 1s 50K .......... .......... .......... .......... .......... 8% 1.87M 1s 100K .......... .......... .......... .......... .......... 13% 63.6M 0s 150K .......... .......... .......... .......... .......... 17% 1.92M 0s 200K .......... .......... .......... .......... .......... 22% 68.7M 0s 250K .......... .......... .......... .......... .......... 26% 63.1M 0s 300K .......... .......... .......... .......... .......... 31% 2.07M 0s 350K .......... .......... .......... .......... .......... 35% 27.1M 0s 400K .......... .......... .......... .......... .......... 39% 54.7M 0s 450K .......... .......... .......... .......... .......... 44% 61.6M 0s 500K .......... .......... .......... .......... .......... 48% 82.6M 0s 550K .......... .......... .......... .......... .......... 53% 65.9M 0s 600K .......... .......... .......... .......... .......... 57% 63.7M 0s 650K .......... .......... .......... .......... .......... 62% 67.4M 0s 700K .......... .......... .......... .......... .......... 66% 2.17M 0s 750K .......... .......... .......... .......... .......... 70% 69.0M 0s 800K .......... .......... .......... .......... .......... 75% 75.1M 0s 850K .......... .......... .......... .......... .......... 79% 66.7M 0s 900K .......... .......... .......... .......... .......... 84% 60.1M 0s 950K .......... .......... .......... .......... .......... 88% 61.7M 0s 1000K .......... .......... .......... .......... .......... 93% 71.7M 0s 1050K .......... .......... .......... .......... .......... 97% 68.9M 0s 1100K .......... .......... ........ 100% 55.5M=0.1s 2025-08-18 01:13:47 (7.97 MB/s) - ‘bladder.rdata’ saved [1155612/1155612] ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netZooR)