| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-18 12:05 -0400 (Mon, 18 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4596 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4538 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1432/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| netZooR 1.13.19 (landing page) Marouen Ben Guebila
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
|
To the developers/maintainers of the netZooR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netZooR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: netZooR |
| Version: 1.13.19 |
| Command: rm -rf netZooR.buildbin-libdir && mkdir netZooR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh netZooR_1.13.19.tar.gz /Library/Frameworks/R.framework/Resources/bin/R netZooR.buildbin-libdir |
| StartedAt: 2025-08-18 01:13:19 -0400 (Mon, 18 Aug 2025) |
| EndedAt: 2025-08-18 01:14:49 -0400 (Mon, 18 Aug 2025) |
| EllapsedTime: 90.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: netZooR_1.13.19.tgz |
| PackageFileSize: 6.726 MiB |
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### Running command:
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### rm -rf netZooR.buildbin-libdir && mkdir netZooR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh netZooR_1.13.19.tar.gz /Library/Frameworks/R.framework/Resources/bin/R netZooR.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=netZooR.buildbin-libdir netZooR_1.13.19.tar.gz'
>>>>>>>
* installing *source* package ‘netZooR’ ...
** this is package ‘netZooR’ version ‘1.13.19’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
--2025-08-18 01:13:46-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/skin.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.132.248, 3.5.128.154, 52.219.102.42, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.132.248|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1596768 (1.5M) [binary/octet-stream]
Saving to: ‘skin.rdata’
0K .......... .......... .......... .......... .......... 3% 1.85M 1s
50K .......... .......... .......... .......... .......... 6% 1.88M 1s
100K .......... .......... .......... .......... .......... 9% 59.3M 0s
150K .......... .......... .......... .......... .......... 12% 1.95M 1s
200K .......... .......... .......... .......... .......... 16% 59.0M 0s
250K .......... .......... .......... .......... .......... 19% 70.9M 0s
300K .......... .......... .......... .......... .......... 22% 65.3M 0s
350K .......... .......... .......... .......... .......... 25% 1.96M 0s
400K .......... .......... .......... .......... .......... 28% 67.8M 0s
450K .......... .......... .......... .......... .......... 32% 78.9M 0s
500K .......... .......... .......... .......... .......... 35% 62.1M 0s
550K .......... .......... .......... .......... .......... 38% 68.6M 0s
600K .......... .......... .......... .......... .......... 41% 69.3M 0s
650K .......... .......... .......... .......... .......... 44% 68.0M 0s
700K .......... .......... .......... .......... .......... 48% 90.4M 0s
750K .......... .......... .......... .......... .......... 51% 2.12M 0s
800K .......... .......... .......... .......... .......... 54% 77.5M 0s
850K .......... .......... .......... .......... .......... 57% 66.0M 0s
900K .......... .......... .......... .......... .......... 60% 63.9M 0s
950K .......... .......... .......... .......... .......... 64% 70.4M 0s
1000K .......... .......... .......... .......... .......... 67% 72.7M 0s
1050K .......... .......... .......... .......... .......... 70% 65.8M 0s
1100K .......... .......... .......... .......... .......... 73% 73.0M 0s
1150K .......... .......... .......... .......... .......... 76% 82.3M 0s
1200K .......... .......... .......... .......... .......... 80% 93.4M 0s
1250K .......... .......... .......... .......... .......... 83% 61.6M 0s
1300K .......... .......... .......... .......... .......... 86% 67.9M 0s
1350K .......... .......... .......... .......... .......... 89% 65.8M 0s
1400K .......... .......... .......... .......... .......... 92% 64.8M 0s
1450K .......... .......... .......... .......... .......... 96% 58.9M 0s
1500K .......... .......... .......... .......... .......... 99% 55.0M 0s
1550K ......... 100% 187K=0.1s
2025-08-18 01:13:47 (10.6 MB/s) - ‘skin.rdata’ saved [1596768/1596768]
--2025-08-18 01:13:47-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/bladder.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.128.11, 3.5.128.154, 52.219.102.42, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.128.11|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1155612 (1.1M) [binary/octet-stream]
Saving to: ‘bladder.rdata’
0K .......... .......... .......... .......... .......... 4% 1.84M 1s
50K .......... .......... .......... .......... .......... 8% 1.87M 1s
100K .......... .......... .......... .......... .......... 13% 63.6M 0s
150K .......... .......... .......... .......... .......... 17% 1.92M 0s
200K .......... .......... .......... .......... .......... 22% 68.7M 0s
250K .......... .......... .......... .......... .......... 26% 63.1M 0s
300K .......... .......... .......... .......... .......... 31% 2.07M 0s
350K .......... .......... .......... .......... .......... 35% 27.1M 0s
400K .......... .......... .......... .......... .......... 39% 54.7M 0s
450K .......... .......... .......... .......... .......... 44% 61.6M 0s
500K .......... .......... .......... .......... .......... 48% 82.6M 0s
550K .......... .......... .......... .......... .......... 53% 65.9M 0s
600K .......... .......... .......... .......... .......... 57% 63.7M 0s
650K .......... .......... .......... .......... .......... 62% 67.4M 0s
700K .......... .......... .......... .......... .......... 66% 2.17M 0s
750K .......... .......... .......... .......... .......... 70% 69.0M 0s
800K .......... .......... .......... .......... .......... 75% 75.1M 0s
850K .......... .......... .......... .......... .......... 79% 66.7M 0s
900K .......... .......... .......... .......... .......... 84% 60.1M 0s
950K .......... .......... .......... .......... .......... 88% 61.7M 0s
1000K .......... .......... .......... .......... .......... 93% 71.7M 0s
1050K .......... .......... .......... .......... .......... 97% 68.9M 0s
1100K .......... .......... ........ 100% 55.5M=0.1s
2025-08-18 01:13:47 (7.97 MB/s) - ‘bladder.rdata’ saved [1155612/1155612]
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (netZooR)