| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-12 12:13 -0400 (Tue, 12 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4553 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4595 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4537 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1432/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| netZooR 1.13.16 (landing page) Marouen Ben Guebila
| nebbiolo2 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
|
To the developers/maintainers of the netZooR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netZooR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: netZooR |
| Version: 1.13.16 |
| Command: /home/biocbuild/R/R/bin/R CMD INSTALL netZooR |
| StartedAt: 2025-08-11 21:00:27 -0000 (Mon, 11 Aug 2025) |
| EndedAt: 2025-08-11 21:02:06 -0000 (Mon, 11 Aug 2025) |
| EllapsedTime: 99.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/R/R/bin/R CMD INSTALL netZooR
###
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* installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’
* installing *source* package ‘netZooR’ ...
** this is package ‘netZooR’ version ‘1.13.16’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
--2025-08-11 21:00:50-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/skin.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.129.162, 3.5.133.53, 3.5.128.11, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.129.162|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1596768 (1.5M) [binary/octet-stream]
Saving to: ‘skin.rdata’
0K .......... .......... .......... .......... .......... 3% 55.2K 27s
50K .......... .......... .......... .......... .......... 6% 59.0K 26s
100K .......... .......... .......... .......... .......... 9% 77.8K 23s
150K .......... .......... .......... .......... .......... 12% 59.2K 22s
200K .......... .......... .......... .......... .......... 16% 59.7K 21s
250K .......... .......... .......... .......... .......... 19% 91.8K 19s
300K .......... .......... .......... .......... .......... 22% 88.1K 18s
350K .......... .......... .......... .......... .......... 25% 143K 16s
400K .......... .......... .......... .......... .......... 28% 117K 15s
450K .......... .......... .......... .......... .......... 32% 143K 13s
500K .......... .......... .......... .......... .......... 35% 238K 12s
550K .......... .......... .......... .......... .......... 38% 226K 11s
600K .......... .......... .......... .......... .......... 41% 194K 10s
650K .......... .......... .......... .......... .......... 44% 229K 9s
700K .......... .......... .......... .......... .......... 48% 610K 8s
750K .......... .......... .......... .......... .......... 51% 168K 7s
800K .......... .......... .......... .......... .......... 54% 18.7M 6s
850K .......... .......... .......... .......... .......... 57% 104K 6s
900K .......... .......... .......... .......... .......... 60% 423K 5s
950K .......... .......... .......... .......... .......... 64% 211M 5s
1000K .......... .......... .......... .......... .......... 67% 238M 4s
1050K .......... .......... .......... .......... .......... 70% 178K 4s
1100K .......... .......... .......... .......... .......... 73% 23.3M 3s
1150K .......... .......... .......... .......... .......... 76% 176K 3s
1200K .......... .......... .......... .......... .......... 80% 377K 2s
1250K .......... .......... .......... .......... .......... 83% 313K 2s
1300K .......... .......... .......... .......... .......... 86% 363K 1s
1350K .......... .......... .......... .......... .......... 89% 315K 1s
1400K .......... .......... .......... .......... .......... 92% 347K 1s
1450K .......... .......... .......... .......... .......... 96% 107K 0s
1500K .......... .......... .......... .......... .......... 99% 35.7M 0s
1550K ......... 100% 17.4T=10s
2025-08-11 21:01:02 (156 KB/s) - ‘skin.rdata’ saved [1596768/1596768]
--2025-08-11 21:01:02-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/bladder.rdata
Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 52.219.103.34, 3.5.128.139, 3.5.132.162, ...
Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|52.219.103.34|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1155612 (1.1M) [binary/octet-stream]
Saving to: ‘bladder.rdata’
0K .......... .......... .......... .......... .......... 4% 165K 7s
50K .......... .......... .......... .......... .......... 8% 164K 6s
100K .......... .......... .......... .......... .......... 13% 167K 6s
150K .......... .......... .......... .......... .......... 17% 210M 4s
200K .......... .......... .......... .......... .......... 22% 209M 3s
250K .......... .......... .......... .......... .......... 26% 170K 3s
300K .......... .......... .......... .......... .......... 31% 101M 3s
350K .......... .......... .......... .......... .......... 35% 169K 3s
400K .......... .......... .......... .......... .......... 39% 106M 2s
450K .......... .......... .......... .......... .......... 44% 68.7M 2s
500K .......... .......... .......... .......... .......... 48% 165K 2s
550K .......... .......... .......... .......... .......... 53% 54.9M 2s
600K .......... .......... .......... .......... .......... 57% 70.3M 1s
650K .......... .......... .......... .......... .......... 62% 167K 1s
700K .......... .......... .......... .......... .......... 66% 67.4M 1s
750K .......... .......... .......... .......... .......... 70% 93.8M 1s
800K .......... .......... .......... .......... .......... 75% 169K 1s
850K .......... .......... .......... .......... .......... 79% 154M 1s
900K .......... .......... .......... .......... .......... 84% 84.8M 0s
950K .......... .......... .......... .......... .......... 88% 63.6M 0s
1000K .......... .......... .......... .......... .......... 93% 164K 0s
1050K .......... .......... .......... .......... .......... 97% 71.0M 0s
1100K .......... .......... ........ 100% 74.0M=2.7s
2025-08-11 21:01:06 (417 KB/s) - ‘bladder.rdata’ saved [1155612/1155612]
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (netZooR)