Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-08-15 12:12 -0400 (Fri, 15 Aug 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4554 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4595 |
kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4537 |
taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1432/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
netZooR 1.13.18 (landing page) Marouen Ben Guebila
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | ERROR | OK | |||||||||
taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | ERROR | ||||||||||
To the developers/maintainers of the netZooR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netZooR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: netZooR |
Version: 1.13.18 |
Command: /home/biocbuild/R/R/bin/R CMD INSTALL netZooR |
StartedAt: 2025-08-14 21:00:42 -0000 (Thu, 14 Aug 2025) |
EndedAt: 2025-08-14 21:02:55 -0000 (Thu, 14 Aug 2025) |
EllapsedTime: 132.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL netZooR ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘netZooR’ ... ** this is package ‘netZooR’ version ‘1.13.18’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading --2025-08-14 21:01:05-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/skin.rdata Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 52.219.108.82, 3.5.131.123, 52.219.93.90, ... Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|52.219.108.82|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 1596768 (1.5M) [binary/octet-stream] Saving to: ‘skin.rdata’ 0K .......... .......... .......... .......... .......... 3% 205K 7s 50K .......... .......... .......... .......... .......... 6% 205K 7s 100K .......... .......... .......... .......... .......... 9% 171M 5s 150K .......... .......... .......... .......... .......... 12% 205K 5s 200K .......... .......... .......... .......... .......... 16% 111M 4s 250K .......... .......... .......... .......... .......... 19% 147M 3s 300K .......... .......... .......... .......... .......... 22% 1.05M 3s 350K .......... .......... .......... .......... .......... 25% 255K 3s 400K .......... .......... .......... .......... .......... 28% 205K 3s 450K .......... .......... .......... .......... .......... 32% 160M 3s 500K .......... .......... .......... .......... .......... 35% 185M 2s 550K .......... .......... .......... .......... .......... 38% 164M 2s 600K .......... .......... .......... .......... .......... 41% 157M 2s 650K .......... .......... .......... .......... .......... 44% 177M 1s 700K .......... .......... .......... .......... .......... 48% 1.04M 1s 750K .......... .......... .......... .......... .......... 51% 199M 1s 800K .......... .......... .......... .......... .......... 54% 256K 1s 850K .......... .......... .......... .......... .......... 57% 53.0M 1s 900K .......... .......... .......... .......... .......... 60% 144M 1s 950K .......... .......... .......... .......... .......... 64% 207M 1s 1000K .......... .......... .......... .......... .......... 67% 203M 1s 1050K .......... .......... .......... .......... .......... 70% 206K 1s 1100K .......... .......... .......... .......... .......... 73% 181M 1s 1150K .......... .......... .......... .......... .......... 76% 206K 1s 1200K .......... .......... .......... .......... .......... 80% 100M 0s 1250K .......... .......... .......... .......... .......... 83% 105M 0s 1300K .......... .......... .......... .......... .......... 86% 121M 0s 1350K .......... .......... .......... .......... .......... 89% 191M 0s 1400K .......... .......... .......... .......... .......... 92% 207K 0s 1450K .......... .......... .......... .......... .......... 96% 56.6M 0s 1500K .......... .......... .......... .......... .......... 99% 206K 0s 1550K ......... 100% 17.4T=2.4s 2025-08-14 21:01:10 (640 KB/s) - ‘skin.rdata’ saved [1596768/1596768] --2025-08-14 21:01:10-- https://netzoo.s3.us-east-2.amazonaws.com/netZooR/unittest_datasets/yarn/bladder.rdata Resolving netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)... 3.5.132.248, 3.5.131.175, 52.219.177.122, ... Connecting to netzoo.s3.us-east-2.amazonaws.com (netzoo.s3.us-east-2.amazonaws.com)|3.5.132.248|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 1155612 (1.1M) [binary/octet-stream] Saving to: ‘bladder.rdata’ 0K .......... .......... .......... .......... .......... 4% 39.3K 27s 50K .......... .......... .......... .......... .......... 8% 13.7K 51s 100K .......... .......... .......... .......... .......... 13% 4.59K 1m43s 150K .......... .......... .......... .......... .......... 17% 9.97K 97s 200K .......... .......... .......... .......... .......... 22% 5.11K 1m48s 250K .......... .......... .......... .......... .......... 26% 6.68K 1m45s 300K .......... .......... .......... .......... .......... 31% 49.1K 87s 350K .......... .......... .......... .......... .......... 35% 98.2K 72s 400K .......... .......... .......... .......... .......... 39% 98.2K 61s 450K .......... .......... .......... .......... .......... 44% 196K 51s 500K .......... .......... .......... .......... .......... 48% 196K 43s 550K .......... .......... .......... .......... .......... 53% 196K 36s 600K .......... .......... .......... .......... .......... 57% 197K 30s 650K .......... .......... .......... .......... .......... 62% 127M 25s 700K .......... .......... .......... .......... .......... 66% 196K 21s 750K .......... .......... .......... .......... .......... 70% 157M 17s 800K .......... .......... .......... .......... .......... 75% 196K 14s 850K .......... .......... .......... .......... .......... 79% 193M 11s 900K .......... .......... .......... .......... .......... 84% 197K 8s 950K .......... .......... .......... .......... .......... 88% 126M 5s 1000K .......... .......... .......... .......... .......... 93% 197K 3s 1050K .......... .......... .......... .......... .......... 97% 151M 1s 1100K .......... .......... ........ 100% 153M=42s 2025-08-14 21:01:55 (26.8 KB/s) - ‘bladder.rdata’ saved [1155612/1155612] ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netZooR)