Multiple platform build/check report for BioC 3.23 - BUILD results for memes on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 alpha (2026-04-05 r89794)	4957
kjohnson3	macOS 13.7.7 Ventura	arm64	4.6.0 alpha (2026-04-08 r89818)	4686
kunpeng2	Linux (openEuler 24.03 LTS)	aarch64	R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"	4627
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for memes on kunpeng2

To the developers/maintainers of the memes package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/memes.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: memes

Version: 1.19.1

Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data memes

StartedAt: 2026-04-17 00:27:46 -0000 (Fri, 17 Apr 2026)

EndedAt: 2026-04-17 00:28:25 -0000 (Fri, 17 Apr 2026)

EllapsedTime: 39.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data memes
###
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* checking for file ‘memes/DESCRIPTION’ ... OK
* preparing ‘memes’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘core_ame.Rmd’ using rmarkdown
--- finished re-building ‘core_ame.Rmd’

--- re-building ‘core_dreme.Rmd’ using rmarkdown
--- finished re-building ‘core_dreme.Rmd’

--- re-building ‘core_fimo.Rmd’ using rmarkdown
--- finished re-building ‘core_fimo.Rmd’

--- re-building ‘core_tomtom.Rmd’ using rmarkdown
--- finished re-building ‘core_tomtom.Rmd’

--- re-building ‘install_guide.Rmd’ using rmarkdown
--- finished re-building ‘install_guide.Rmd’

--- re-building ‘integrative_analysis.Rmd’ using rmarkdown
--- finished re-building ‘integrative_analysis.Rmd’

--- re-building ‘tidy_motifs.Rmd’ using rmarkdown

Quitting from tidy_motifs.Rmd:40-43 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
---
Backtrace:
     ▆
  1. ├─MotifDb::MotifDb %>% MotifDb::query("FlyFactorSurvey")
  2. └─base::loadNamespace(x)
  3.   ├─base::namespaceImportFrom(...)
  4.   │ └─base::asNamespace(ns)
  5.   └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
  6.     ├─base::namespaceImportFrom(...)
  7.     │ └─base::asNamespace(ns)
  8.     └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
  9.       └─base::namespaceImportClasses(...)
 10.         └─base::namespaceImportFrom(self, asNamespace(ns), vars, from = from)
 11.           └─base::importIntoEnv(impenv, impnames, ns, impvars)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'tidy_motifs.Rmd' failed with diagnostics:
class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
--- failed re-building ‘tidy_motifs.Rmd’

SUMMARY: processing the following file failed:
  ‘tidy_motifs.Rmd’

Error: Vignette re-building failed.
Execution halted