Britta Velten
| Snapshot Date: 2025-08-14 13:45 -0400 (Thu, 14 Aug 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-15 12:05 -0400 (Fri, 15 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4818 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4554 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4595 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4537 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4535 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 905/2317 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-08-14 23:02:52 -0400 (Thu, 14 Aug 2025) |
| EndedAt: 2025-08-14 23:04:15 -0400 (Thu, 14 Aug 2025) |
| EllapsedTime: 83.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-835.908
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.575
ELB improved by 263.333
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.845
ELB improved by 61.7293
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.342
ELB improved by 40.5031
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.09
ELB improved by 17.2521
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.698
ELB improved by 7.39277
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.21
ELB improved by 4.48723
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.41
ELB improved by 3.80036
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.748
ELB improved by 3.66154
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.11
ELB improved by 3.6381
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.546
ELB improved by 3.5643
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.24
ELB improved by 3.30633
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.453
ELB improved by 2.78651
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.341
ELB improved by 2.11243
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.839
ELB improved by 1.50154
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.785
ELB improved by 1.05429
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.032
ELB improved by 0.752964
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.48
ELB improved by 0.552262
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.063
ELB improved by 0.416763
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.74
ELB improved by 0.323074
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.483
ELB improved by 0.256715
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.274
ELB improved by 0.208997
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.1
ELB improved by 0.174265
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.951
ELB improved by 0.148496
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.823
ELB improved by 0.128844
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.709
ELB improved by 0.113391
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.608
ELB improved by 0.100886
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.518
ELB improved by 0.090521
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.436
ELB improved by 0.0817638
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.362
ELB improved by 0.0742545
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.294
ELB improved by 0.0677411
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.232
ELB improved by 0.0620406
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.175
ELB improved by 0.0570157
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.122
ELB improved by 0.0525602
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.074
ELB improved by 0.0485903
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.029
ELB improved by 0.0450382
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.987
ELB improved by 0.0418485
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.948
ELB improved by 0.038975
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.912
ELB improved by 0.0363791
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.878
ELB improved by 0.0340281
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.846
ELB improved by 0.0318942
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.816
ELB improved by 0.0299535
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.787
ELB improved by 0.0281855
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.761
ELB improved by 0.0265726
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.736
ELB improved by 0.0250996
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.712
ELB improved by 0.0237531
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.69
ELB improved by 0.0225219
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.668
ELB improved by 0.0213962
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.648
ELB improved by 0.0203676
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.628
ELB improved by 0.0194292
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.61
ELB improved by 0.0185754
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.592
ELB improved by 0.0178016
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.575
ELB improved by 0.017105
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.558
ELB improved by 0.0164839
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.542
ELB improved by 0.0159382
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.527
ELB improved by 0.0154699
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.512
ELB improved by 0.0150834
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.497
ELB improved by 0.0147856
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.483
ELB improved by 0.0145874
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.468
ELB improved by 0.0145037
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.453
ELB improved by 0.0145548
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.439
ELB improved by 0.0147666
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.424
ELB improved by 0.0151701
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.408
ELB improved by 0.0157987
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.391
ELB improved by 0.0166808
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.373
ELB improved by 0.0178257
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.354
ELB improved by 0.0192018
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.333
ELB improved by 0.0207107
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.311
ELB improved by 0.0221718
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.288
ELB improved by 0.0233427
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.264
ELB improved by 0.0239893
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.24
ELB improved by 0.0239834
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.216
ELB improved by 0.0233672
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.194
ELB improved by 0.0223311
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.173
ELB improved by 0.0211241
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.153
ELB improved by 0.0199617
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.134
ELB improved by 0.0189811
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.116
ELB improved by 0.0182443
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.098
ELB improved by 0.0177635
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.081
ELB improved by 0.0175275
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.063
ELB improved by 0.01752
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.045
ELB improved by 0.0177315
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.027
ELB improved by 0.0181654
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.008
ELB improved by 0.0188427
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.988
ELB improved by 0.0198074
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.967
ELB improved by 0.0211343
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.944
ELB improved by 0.0229405
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.919
ELB improved by 0.0254043
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.89
ELB improved by 0.0287896
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.857
ELB improved by 0.0334745
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.817
ELB improved by 0.0399642
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.768
ELB improved by 0.0488331
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.707
ELB improved by 0.0604874
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.633
ELB improved by 0.0746483
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.543
ELB improved by 0.0897735
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.44
ELB improved by 0.103273
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.327
ELB improved by 0.113088
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.207
ELB improved by 0.119165
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.084
ELB improved by 0.122969
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.958
ELB improved by 0.126032
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.829
ELB improved by 0.129303
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.696
ELB improved by 0.13331
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.557
ELB improved by 0.138464
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.412
ELB improved by 0.14525
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.258
ELB improved by 0.1543
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.091
ELB improved by 0.166427
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.909
ELB improved by 0.182611
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.705
ELB improved by 0.203918
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.474
ELB improved by 0.23123
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.209
ELB improved by 0.264672
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.906
ELB improved by 0.302905
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.563
ELB improved by 0.343112
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.181
ELB improved by 0.382266
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.762
ELB improved by 0.418345
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.312
ELB improved by 0.449933
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.837
ELB improved by 0.475478
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.344
ELB improved by 0.493357
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.842
ELB improved by 0.502033
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.341
ELB improved by 0.500475
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.851
ELB improved by 0.489921
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.377
ELB improved by 0.473715
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.927
ELB improved by 0.450718
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.512
ELB improved by 0.414847
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.146
ELB improved by 0.365664
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.841
ELB improved by 0.304862
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.602
ELB improved by 0.239055
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.421
ELB improved by 0.181754
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.281
ELB improved by 0.139488
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.17
ELB improved by 0.11083
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.078
ELB improved by 0.0925642
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.995
ELB improved by 0.0823293
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.917
ELB improved by 0.0786662
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.836
ELB improved by 0.0801918
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.752
ELB improved by 0.0844318
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.665
ELB improved by 0.0873283
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.579
ELB improved by 0.0856667
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.498
ELB improved by 0.0814706
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.416
ELB improved by 0.0812962
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.328
ELB improved by 0.0887382
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.23
ELB improved by 0.0972428
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.138
ELB improved by 0.0927512
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.066
ELB improved by 0.0715722
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.02
ELB improved by 0.0462674
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.992
ELB improved by 0.0275795
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.975
ELB improved by 0.0167016
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.964
ELB improved by 0.0109762
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.956
ELB improved by 0.00801678
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.886
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.367
ELB improved by 291.519
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.255
ELB improved by 63.1121
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.031
ELB improved by 41.2241
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.656
ELB improved by 18.3749
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.061
ELB improved by 7.59569
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.397
ELB improved by 4.66325
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.321
ELB improved by 4.07666
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.311
ELB improved by 4.00949
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.278
ELB improved by 4.03276
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.321
ELB improved by 3.95715
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.654
ELB improved by 3.6674
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.511
ELB improved by 3.1426
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.034
ELB improved by 2.47705
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.202
ELB improved by 1.83235
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.877
ELB improved by 1.32488
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.903
ELB improved by 0.973875
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.16
ELB improved by 0.743487
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.568
ELB improved by 0.591717
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.08
ELB improved by 0.488265
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.665
ELB improved by 0.414403
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.306
ELB improved by 0.35921
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.99
ELB improved by 0.316507
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.707
ELB improved by 0.282799
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.451
ELB improved by 0.255987
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.216
ELB improved by 0.234673
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.998
ELB improved by 0.217825
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.794
ELB improved by 0.204642
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.599
ELB improved by 0.194485
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.412
ELB improved by 0.18684
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.231
ELB improved by 0.18129
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.054
ELB improved by 0.17749
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.878
ELB improved by 0.175147
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.704
ELB improved by 0.174011
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.531
ELB improved by 0.173866
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.356
ELB improved by 0.174529
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.18
ELB improved by 0.175862
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.002
ELB improved by 0.177781
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.822
ELB improved by 0.180274
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.639
ELB improved by 0.183422
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.451
ELB improved by 0.187406
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.259
ELB improved by 0.192503
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.06
ELB improved by 0.199057
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.852
ELB improved by 0.207407
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.635
ELB improved by 0.217768
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.404
ELB improved by 0.230054
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.161
ELB improved by 0.243681
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.903
ELB improved by 0.257448
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.634
ELB improved by 0.269631
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.355
ELB improved by 0.278342
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.073
ELB improved by 0.281971
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.794
ELB improved by 0.279499
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.523
ELB improved by 0.270608
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.268
ELB improved by 0.255714
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.032
ELB improved by 0.235943
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.819
ELB improved by 0.212997
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.63
ELB improved by 0.188874
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.464
ELB improved by 0.165484
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.32
ELB improved by 0.144312
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.194
ELB improved by 0.126236
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.082
ELB improved by 0.111507
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.982
ELB improved by 0.0998744
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.892
ELB improved by 0.0907496
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.808
ELB improved by 0.0834019
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.731
ELB improved by 0.0771378
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.66
ELB improved by 0.0714469
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.594
ELB improved by 0.0660685
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.533
ELB improved by 0.0609628
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.476
ELB improved by 0.056223
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.424
ELB improved by 0.0519934
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.376
ELB improved by 0.0484312
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.33
ELB improved by 0.0457001
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.286
ELB improved by 0.0439734
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.243
ELB improved by 0.0434321
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.199
ELB improved by 0.044257
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.152
ELB improved by 0.046603
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.101
ELB improved by 0.0505212
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.046
ELB improved by 0.055743
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.984
ELB improved by 0.0612366
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.92
ELB improved by 0.0647559
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.856
ELB improved by 0.0634022
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.8
ELB improved by 0.0560024
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.755
ELB improved by 0.0448778
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.722
ELB improved by 0.0338147
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.697
ELB improved by 0.0249905
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.678
ELB improved by 0.0186365
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.664
ELB improved by 0.0141988
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.653
ELB improved by 0.0110844
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.644
ELB improved by 0.00885719
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-910.48
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.923
ELB improved by 324.556
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.734
ELB improved by 61.1899
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.67
ELB improved by 39.0633
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.655
ELB improved by 18.0149
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.117
ELB improved by 7.53853
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.724
ELB improved by 4.39247
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.218
ELB improved by 3.50615
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.941
ELB improved by 3.27678
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.635
ELB improved by 3.30604
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.22
ELB improved by 3.41535
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.798
ELB improved by 3.42188
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.657
ELB improved by 3.14103
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.108
ELB improved by 2.5492
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.247
ELB improved by 1.86099
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.935
ELB improved by 1.31169
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.98
ELB improved by 0.954839
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.259
ELB improved by 0.720954
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.712
ELB improved by 0.547771
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.292
ELB improved by 0.41993
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.956
ELB improved by 0.33572
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.672
ELB improved by 0.283659
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.421
ELB improved by 0.250888
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.192
ELB improved by 0.229203
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.978
ELB improved by 0.214064
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.775
ELB improved by 0.202955
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.581
ELB improved by 0.194466
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.393
ELB improved by 0.187822
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.21
ELB improved by 0.182645
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.031
ELB improved by 0.17883
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.855
ELB improved by 0.176468
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.679
ELB improved by 0.175809
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.502
ELB improved by 0.177232
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.321
ELB improved by 0.181212
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.133
ELB improved by 0.188242
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.934
ELB improved by 0.198699
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.721
ELB improved by 0.212664
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.491
ELB improved by 0.229895
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.241
ELB improved by 0.250274
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.966
ELB improved by 0.274794
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.659
ELB improved by 0.306721
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.307
ELB improved by 0.352731
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.423032
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.364
ELB improved by 0.520192
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.761
ELB improved by 0.602262
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.154
ELB improved by 0.607343
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.59
ELB improved by 0.564142
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.069
ELB improved by 0.520478
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.589
ELB improved by 0.480358
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.149
ELB improved by 0.439486
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.75
ELB improved by 0.399015
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.387
ELB improved by 0.363767
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.048
ELB improved by 0.33905
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.721
ELB improved by 0.326517
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.404
ELB improved by 0.317606
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.111
ELB improved by 0.292532
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.869
ELB improved by 0.241494
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.688
ELB improved by 0.181399
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.556
ELB improved by 0.132132
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.458
ELB improved by 0.0981425
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.382
ELB improved by 0.0756856
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.321
ELB improved by 0.0606387
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.271
ELB improved by 0.0502584
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.228
ELB improved by 0.0428575
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.191
ELB improved by 0.0373752
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.158
ELB improved by 0.0331367
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.128
ELB improved by 0.0297379
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.101
ELB improved by 0.0269766
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.076
ELB improved by 0.0247935
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.053
ELB improved by 0.0232145
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.031
ELB improved by 0.0223117
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.009
ELB improved by 0.022191
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.986
ELB improved by 0.023008
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.961
ELB improved by 0.0249988
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.932
ELB improved by 0.0285156
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.898
ELB improved by 0.0340509
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.856
ELB improved by 0.0422269
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.802
ELB improved by 0.0537073
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.733
ELB improved by 0.0689522
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.646
ELB improved by 0.0876029
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.538
ELB improved by 0.107205
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.416
ELB improved by 0.122228
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.289
ELB improved by 0.127217
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.165
ELB improved by 0.123552
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.047
ELB improved by 0.118476
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.931
ELB improved by 0.115891
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.819
ELB improved by 0.111853
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.721
ELB improved by 0.09851
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.646
ELB improved by 0.0746036
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.597
ELB improved by 0.0494231
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.565
ELB improved by 0.0313229
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.544
ELB improved by 0.0208717
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.529
ELB improved by 0.0152294
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.517
ELB improved by 0.0120662
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.507
ELB improved by 0.0101442
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.498
ELB improved by 0.00888265
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-833.041
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.896
ELB improved by 276.145
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.644
ELB improved by 58.2521
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.88
ELB improved by 35.7636
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.908
ELB improved by 15.9717
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.993
ELB improved by 6.91551
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.489
ELB improved by 3.5036
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.134
ELB improved by 2.35528
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.127
ELB improved by 2.00664
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.184
ELB improved by 1.94359
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.173
ELB improved by 2.01053
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.019
ELB improved by 2.1546
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.684
ELB improved by 2.3348
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.2
ELB improved by 2.4836
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.694
ELB improved by 2.50613
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.37
ELB improved by 2.32379
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.421
ELB improved by 1.94933
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.904
ELB improved by 1.51737
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.735
ELB improved by 1.16825
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.788
ELB improved by 0.94769
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.832982
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.169
ELB improved by 0.786178
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.391
ELB improved by 0.778019
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.6
ELB improved by 0.790934
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.784
ELB improved by 0.815862
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.935
ELB improved by 0.848808
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.047
ELB improved by 0.888151
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.114
ELB improved by 0.932545
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.135
ELB improved by 0.979152
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.113
ELB improved by 1.02215
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.061
ELB improved by 1.05183
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.006
ELB improved by 1.05533
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.985
ELB improved by 1.0205
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.042
ELB improved by 0.942895
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.211
ELB improved by 0.831541
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.504
ELB improved by 0.707043
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.912
ELB improved by 0.591568
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.415
ELB improved by 0.497479
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.993
ELB improved by 0.421604
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.641
ELB improved by 0.352147
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.355
ELB improved by 0.285938
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.125
ELB improved by 0.230364
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.935
ELB improved by 0.18958
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.774
ELB improved by 0.161169
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.633
ELB improved by 0.140739
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.508
ELB improved by 0.125043
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.395
ELB improved by 0.11301
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.29
ELB improved by 0.105008
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.189
ELB improved by 0.101084
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.09
ELB improved by 0.0992241
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.995
ELB improved by 0.0948323
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.911
ELB improved by 0.0835469
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.845
ELB improved by 0.066156
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.797
ELB improved by 0.0481848
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.763
ELB improved by 0.0340824
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.738
ELB improved by 0.0246579
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.72
ELB improved by 0.018764
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.704
ELB improved by 0.0150749
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.692
ELB improved by 0.0126679
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.681
ELB improved by 0.0110013
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.671
ELB improved by 0.00977488
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.218 0.299 2.505
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.048 | 0.006 | 0.056 | |
| getPIPs | 0.046 | 0.006 | 0.051 | |
| graper | 0.078 | 0.008 | 0.088 | |
| makeExampleData | 0.009 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.030 | 0.014 | 0.044 | |
| plotELBO | 0.187 | 0.013 | 0.199 | |
| plotGroupPenalties | 0.657 | 0.010 | 0.666 | |
| plotPosterior | 0.469 | 0.000 | 0.469 | |
| predict.graper | 2.049 | 0.006 | 2.055 | |
| print.graper | 0.045 | 0.005 | 0.049 | |