Britta Velten
| Snapshot Date: 2026-04-28 14:49 -0400 (Tue, 28 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: ba611e2 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-04-29 10:00 -0400 (Wed, 29 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4843 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 923/2366 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.29.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz |
| StartedAt: 2026-04-29 01:13:24 -0400 (Wed, 29 Apr 2026) |
| EndedAt: 2026-04-29 01:14:58 -0400 (Wed, 29 Apr 2026) |
| EllapsedTime: 94.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-29 05:13:24 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.29.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-888.438
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.249
ELB improved by 315.189
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.974
ELB improved by 58.2751
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.952
ELB improved by 35.0211
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.915
ELB improved by 15.0372
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.522
ELB improved by 6.39298
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.599
ELB improved by 3.92325
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.362
ELB improved by 3.23673
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.344
ELB improved by 3.01846
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.437
ELB improved by 2.90674
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.639
ELB improved by 2.79822
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.986
ELB improved by 2.6529
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.534
ELB improved by 2.45193
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.342
ELB improved by 2.19241
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.452
ELB improved by 1.88979
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.872
ELB improved by 1.57962
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.581
ELB improved by 1.29106
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.56
ELB improved by 1.02128
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.785
ELB improved by 0.775285
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.206
ELB improved by 0.578874
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.767
ELB improved by 0.439105
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.422
ELB improved by 0.344287
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.142
ELB improved by 0.280312
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.905
ELB improved by 0.236556
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.699
ELB improved by 0.206028
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.515
ELB improved by 0.184368
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.346
ELB improved by 0.168937
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.188
ELB improved by 0.158177
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.037
ELB improved by 0.151228
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.889
ELB improved by 0.147711
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.741
ELB improved by 0.147644
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.59
ELB improved by 0.151453
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.43
ELB improved by 0.160078
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.255
ELB improved by 0.175203
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.055
ELB improved by 0.199563
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.818
ELB improved by 0.237202
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.525
ELB improved by 0.293017
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.154
ELB improved by 0.370417
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.687
ELB improved by 0.467201
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.112
ELB improved by 0.574877
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.427
ELB improved by 0.685625
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.629
ELB improved by 0.797916
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.714
ELB improved by 0.914922
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.672
ELB improved by 1.04236
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.486
ELB improved by 1.18511
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.149
ELB improved by 1.33774
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.676
ELB improved by 1.47253
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.138
ELB improved by 1.53854
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.65
ELB improved by 1.48733
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.336
ELB improved by 1.31395
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.267
ELB improved by 1.06953
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.44
ELB improved by 0.826393
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.808
ELB improved by 0.632812
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.312
ELB improved by 0.495934
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.916
ELB improved by 0.395303
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.604
ELB improved by 0.311941
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.359
ELB improved by 0.245594
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.155
ELB improved by 0.203475
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.97
ELB improved by 0.185412
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.791
ELB improved by 0.178965
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.628
ELB improved by 0.163211
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.497
ELB improved by 0.131167
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.4
ELB improved by 0.0968418
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.329
ELB improved by 0.0712197
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.274
ELB improved by 0.0545359
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.23
ELB improved by 0.043725
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.194
ELB improved by 0.0363804
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.163
ELB improved by 0.0311102
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.136
ELB improved by 0.0271502
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.112
ELB improved by 0.0240678
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.09
ELB improved by 0.0216035
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.07
ELB improved by 0.0195927
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.052
ELB improved by 0.0179264
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.036
ELB improved by 0.0165291
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.021
ELB improved by 0.0153475
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.006
ELB improved by 0.0143428
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.993
ELB improved by 0.013487
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.98
ELB improved by 0.0127602
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.968
ELB improved by 0.0121492
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.956
ELB improved by 0.0116469
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.945
ELB improved by 0.0112525
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.934
ELB improved by 0.0109726
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.923
ELB improved by 0.0108228
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.912
ELB improved by 0.0108311
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.901
ELB improved by 0.0110439
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.89
ELB improved by 0.0115363
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.877
ELB improved by 0.0124292
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.863
ELB improved by 0.0139215
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.847
ELB improved by 0.0163465
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.827
ELB improved by 0.0202717
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.8
ELB improved by 0.0266539
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.763
ELB improved by 0.0369708
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.71
ELB improved by 0.0528456
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.637
ELB improved by 0.073737
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.545
ELB improved by 0.0920462
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.451
ELB improved by 0.093991
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.375
ELB improved by 0.07597
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.323
ELB improved by 0.0511675
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.292
ELB improved by 0.0317409
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.272
ELB improved by 0.0200045
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.258
ELB improved by 0.0137079
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.247
ELB improved by 0.0104794
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.239
ELB improved by 0.0088429
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.688
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-547.668
ELB improved by 329.019
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.907
ELB improved by 58.762
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.964
ELB improved by 27.9424
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.836
ELB improved by 11.1283
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.003
ELB improved by 5.83248
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.474
ELB improved by 4.52944
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.149
ELB improved by 4.325
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.734
ELB improved by 4.41539
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.34
ELB improved by 4.39306
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.362
ELB improved by 3.9785
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.193
ELB improved by 3.16945
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.947
ELB improved by 2.24558
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.46
ELB improved by 1.48683
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.481
ELB improved by 0.978655
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.812
ELB improved by 0.669431
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.328
ELB improved by 0.483656
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.96
ELB improved by 0.368025
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.668
ELB improved by 0.292167
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.428
ELB improved by 0.239762
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.227
ELB improved by 0.201902
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.053
ELB improved by 0.173499
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.902
ELB improved by 0.151495
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.768
ELB improved by 0.133972
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.648
ELB improved by 0.119684
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.54
ELB improved by 0.1078
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.442
ELB improved by 0.0977521
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.353
ELB improved by 0.0891452
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.271
ELB improved by 0.081697
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.196
ELB improved by 0.0752017
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.127
ELB improved by 0.0695055
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.062
ELB improved by 0.0644905
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.002
ELB improved by 0.0600645
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.946
ELB improved by 0.0561543
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.893
ELB improved by 0.0527013
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.844
ELB improved by 0.0496588
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.797
ELB improved by 0.0469904
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.752
ELB improved by 0.0446688
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.709
ELB improved by 0.0426758
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.668
ELB improved by 0.0410026
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.629
ELB improved by 0.0396512
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.59
ELB improved by 0.038637
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.552
ELB improved by 0.0379924
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.514
ELB improved by 0.0377741
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.476
ELB improved by 0.0380735
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.437
ELB improved by 0.0390346
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.396
ELB improved by 0.0408834
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.352
ELB improved by 0.0439773
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.303
ELB improved by 0.0488917
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.247
ELB improved by 0.0565708
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.178
ELB improved by 0.0685941
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.091
ELB improved by 0.087604
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.973
ELB improved by 0.117751
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.809
ELB improved by 0.163961
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.583
ELB improved by 0.226132
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.296
ELB improved by 0.286789
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.98
ELB improved by 0.315572
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.674
ELB improved by 0.306823
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.388
ELB improved by 0.285454
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.115
ELB improved by 0.272923
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.847
ELB improved by 0.268695
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.587
ELB improved by 0.259753
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.343
ELB improved by 0.243984
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.113
ELB improved by 0.229714
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.891
ELB improved by 0.221882
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.67
ELB improved by 0.220828
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.444
ELB improved by 0.226267
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.205
ELB improved by 0.239048
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.944
ELB improved by 0.261584
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.646
ELB improved by 0.297995
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.293
ELB improved by 0.352995
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.866
ELB improved by 0.426312
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.362
ELB improved by 0.504205
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.793
ELB improved by 0.569202
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.167
ELB improved by 0.626024
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.473
ELB improved by 0.69418
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.683
ELB improved by 0.789987
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.754
ELB improved by 0.929015
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.63
ELB improved by 1.12341
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.261
ELB improved by 1.36877
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.668
ELB improved by 1.59319
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.014
ELB improved by 1.65453
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.518
ELB improved by 1.49584
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.363
ELB improved by 1.15436
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.528
ELB improved by 0.835214
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.946
ELB improved by 0.581835
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.56
ELB improved by 0.386538
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.305
ELB improved by 0.254845
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.135
ELB improved by 0.169875
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.02
ELB improved by 0.115518
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.939
ELB improved by 0.0810262
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.88
ELB improved by 0.0588632
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.836
ELB improved by 0.0442248
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.801
ELB improved by 0.0342484
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.774
ELB improved by 0.0272419
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.752
ELB improved by 0.0221875
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.733
ELB improved by 0.0184555
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.718
ELB improved by 0.0156436
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.704
ELB improved by 0.0134865
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.692
ELB improved by 0.0118045
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.682
ELB improved by 0.0104727
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.673
ELB improved by 0.00940303
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-890.889
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-601.746
ELB improved by 289.142
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-541.925
ELB improved by 59.8215
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.912
ELB improved by 44.0133
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.114
ELB improved by 21.7973
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.377
ELB improved by 8.73746
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.634
ELB improved by 4.74297
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.941
ELB improved by 3.69314
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.551
ELB improved by 3.38979
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.227
ELB improved by 3.3243
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.874
ELB improved by 3.35261
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.505
ELB improved by 3.36876
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.263
ELB improved by 3.24224
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.386
ELB improved by 2.87756
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.072
ELB improved by 2.31357
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.36
ELB improved by 1.71252
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.143
ELB improved by 1.21622
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.282
ELB improved by 0.86129
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.661
ELB improved by 0.620579
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.202
ELB improved by 0.459624
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.849
ELB improved by 0.352558
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.569
ELB improved by 0.280724
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.337
ELB improved by 0.231075
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.142
ELB improved by 0.195177
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.974
ELB improved by 0.167951
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.828
ELB improved by 0.146437
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.699
ELB improved by 0.128898
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.585
ELB improved by 0.114276
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.483
ELB improved by 0.10189
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.392
ELB improved by 0.0912766
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.309
ELB improved by 0.0821026
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.235
ELB improved by 0.0741183
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.168
ELB improved by 0.0671301
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.107
ELB improved by 0.0609837
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.052
ELB improved by 0.0555543
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.001
ELB improved by 0.0507396
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.954
ELB improved by 0.0464546
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.912
ELB improved by 0.0426285
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.873
ELB improved by 0.0392016
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.837
ELB improved by 0.0361235
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.803
ELB improved by 0.0333511
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.772
ELB improved by 0.030848
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.744
ELB improved by 0.0285825
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.717
ELB improved by 0.0265277
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.693
ELB improved by 0.0246601
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.67
ELB improved by 0.0229593
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.648
ELB improved by 0.0214076
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.628
ELB improved by 0.0199895
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.609
ELB improved by 0.0186913
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.592
ELB improved by 0.0175012
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.576
ELB improved by 0.0164086
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.56
ELB improved by 0.015404
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.546
ELB improved by 0.0144793
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.532
ELB improved by 0.0136269
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.519
ELB improved by 0.0128404
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.507
ELB improved by 0.0121138
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.496
ELB improved by 0.0114418
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.485
ELB improved by 0.0108197
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.475
ELB improved by 0.0102433
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.465
ELB improved by 0.00970866
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.202
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.282
ELB improved by 268.92
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.065
ELB improved by 61.2168
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.728
ELB improved by 41.3373
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.34
ELB improved by 18.3883
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.757
ELB improved by 7.58309
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.137
ELB improved by 4.62006
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.053
ELB improved by 4.08346
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.947
ELB improved by 4.10632
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.76
ELB improved by 4.18701
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.709
ELB improved by 4.05132
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.143
ELB improved by 3.56524
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.305
ELB improved by 2.8388
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.167
ELB improved by 2.13784
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.524
ELB improved by 1.643
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.206
ELB improved by 1.31798
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.19
ELB improved by 1.01585
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.459
ELB improved by 0.730429
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.941
ELB improved by 0.51897
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.559
ELB improved by 0.381916
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.263
ELB improved by 0.295652
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.023
ELB improved by 0.240064
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.82
ELB improved by 0.202569
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.644
ELB improved by 0.176047
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.488
ELB improved by 0.15655
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.346
ELB improved by 0.14184
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.215
ELB improved by 0.13058
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.093
ELB improved by 0.121924
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.978
ELB improved by 0.115308
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.868
ELB improved by 0.110337
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.761
ELB improved by 0.106723
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.657
ELB improved by 0.104255
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.554
ELB improved by 0.102771
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.452
ELB improved by 0.102148
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.35
ELB improved by 0.102294
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.246
ELB improved by 0.103137
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.142
ELB improved by 0.10463
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.035
ELB improved by 0.106743
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.926
ELB improved by 0.109468
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.813
ELB improved by 0.112824
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.696
ELB improved by 0.116865
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.574
ELB improved by 0.121694
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.447
ELB improved by 0.127483
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.312
ELB improved by 0.134509
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.169
ELB improved by 0.143207
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.015
ELB improved by 0.154248
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.846
ELB improved by 0.168636
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.658
ELB improved by 0.187783
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.445
ELB improved by 0.213376
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.198
ELB improved by 0.246649
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.911
ELB improved by 0.28677
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.582
ELB improved by 0.3297
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.211
ELB improved by 0.370411
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.804
ELB improved by 0.406924
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.364
ELB improved by 0.440172
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.893
ELB improved by 0.471019
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.394
ELB improved by 0.499454
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.868
ELB improved by 0.52569
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.317
ELB improved by 0.551547
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.735
ELB improved by 0.581795
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.109
ELB improved by 0.625722
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.413
ELB improved by 0.695634
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.636
ELB improved by 0.777622
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.863
ELB improved by 0.772705
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.237
ELB improved by 0.626106
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.789
ELB improved by 0.448024
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.478
ELB improved by 0.311206
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.259
ELB improved by 0.218742
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.1
ELB improved by 0.158543
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.981
ELB improved by 0.119517
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.887
ELB improved by 0.0940239
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.81
ELB improved by 0.0773599
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.743
ELB improved by 0.0668006
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.682
ELB improved by 0.0608818
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.623
ELB improved by 0.0589582
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.562
ELB improved by 0.0609091
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.495
ELB improved by 0.0667658
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.419
ELB improved by 0.0758855
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.334
ELB improved by 0.0854573
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.244
ELB improved by 0.0897908
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.16
ELB improved by 0.0838617
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.091
ELB improved by 0.0691842
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.039
ELB improved by 0.0524858
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400
ELB improved by 0.0388031
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.971
ELB improved by 0.0292008
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.948
ELB improved by 0.0227924
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.929
ELB improved by 0.0184812
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.914
ELB improved by 0.0154833
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.901
ELB improved by 0.0133137
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.889
ELB improved by 0.0116817
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.878
ELB improved by 0.0104097
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.869
ELB improved by 0.00938703
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.394 0.191 2.573
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.015 | 0.066 | |
| getPIPs | 0.071 | 0.025 | 0.095 | |
| graper | 0.080 | 0.004 | 0.085 | |
| makeExampleData | 0.010 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.001 | 0.012 | |
| plotELBO | 0.298 | 0.023 | 0.321 | |
| plotGroupPenalties | 0.960 | 0.002 | 0.962 | |
| plotPosterior | 0.664 | 0.001 | 0.666 | |
| predict.graper | 2.061 | 0.013 | 2.075 | |
| print.graper | 0.051 | 0.001 | 0.052 | |