Britta Velten
| Snapshot Date: 2025-09-04 13:45 -0400 (Thu, 04 Sep 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-09-05 12:04 -0400 (Fri, 05 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4823 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4618 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4565 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4544 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 907/2322 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | ERROR | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-09-05 00:21:03 -0400 (Fri, 05 Sep 2025) |
| EndedAt: 2025-09-05 00:22:26 -0400 (Fri, 05 Sep 2025) |
| EllapsedTime: 83.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.25.2’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include/RcppArmadillo.h:29,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include/RcppArmadillo.h:29,
from fit_graper.cpp:3:
/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.628
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.539
ELB improved by 289.089
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.059
ELB improved by 62.4799
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.621
ELB improved by 46.4383
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.512
ELB improved by 21.1085
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.192
ELB improved by 8.32003
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.336
ELB improved by 4.85568
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.312
ELB improved by 4.02393
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.414
ELB improved by 3.89861
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.374
ELB improved by 4.03956
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.079
ELB improved by 4.29533
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.516
ELB improved by 4.56281
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.813
ELB improved by 4.70316
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.296
ELB improved by 4.51728
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.415
ELB improved by 3.88041
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.472
ELB improved by 2.94333
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.447
ELB improved by 2.02466
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.112
ELB improved by 1.33497
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.21
ELB improved by 0.901942
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.556
ELB improved by 0.654613
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.037
ELB improved by 0.518973
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.587
ELB improved by 0.449894
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.165
ELB improved by 0.422337
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.743
ELB improved by 0.421603
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.304
ELB improved by 0.439144
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.834
ELB improved by 0.470229
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.321
ELB improved by 0.512212
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.758
ELB improved by 0.563292
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.136
ELB improved by 0.621634
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.452
ELB improved by 0.684655
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.703
ELB improved by 0.748339
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.897
ELB improved by 0.806644
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.045
ELB improved by 0.851418
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.172
ELB improved by 0.873554
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.306
ELB improved by 0.865687
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.481
ELB improved by 0.825259
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.725
ELB improved by 0.755743
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.06
ELB improved by 0.665395
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.495
ELB improved by 0.565213
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.028
ELB improved by 0.466651
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.649
ELB improved by 0.378404
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.345
ELB improved by 0.304308
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.101
ELB improved by 0.244232
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.905
ELB improved by 0.196286
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.746
ELB improved by 0.158305
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.618
ELB improved by 0.128361
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.513
ELB improved by 0.104828
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.427
ELB improved by 0.0863516
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.355
ELB improved by 0.0718259
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.295
ELB improved by 0.0603709
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.243
ELB improved by 0.0513006
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.199
ELB improved by 0.044089
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.161
ELB improved by 0.0383365
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.127
ELB improved by 0.0337412
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.097
ELB improved by 0.0300761
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.07
ELB improved by 0.0271715
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.045
ELB improved by 0.0249012
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.022
ELB improved by 0.0231722
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385
ELB improved by 0.0219151
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.979
ELB improved by 0.0210749
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.958
ELB improved by 0.0206005
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.938
ELB improved by 0.0204309
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.917
ELB improved by 0.0204814
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.897
ELB improved by 0.020631
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.876
ELB improved by 0.0207227
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.855
ELB improved by 0.020583
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.835
ELB improved by 0.0200628
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.816
ELB improved by 0.019083
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.799
ELB improved by 0.017663
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.783
ELB improved by 0.0159157
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.769
ELB improved by 0.014012
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.757
ELB improved by 0.0121314
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.746
ELB improved by 0.0104169
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.737
ELB improved by 0.00895027
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.739
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.882
ELB improved by 294.857
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.205
ELB improved by 58.677
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.955
ELB improved by 38.2497
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.089
ELB improved by 16.8663
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.644
ELB improved by 7.44491
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.889
ELB improved by 4.75526
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.872
ELB improved by 4.01714
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.861
ELB improved by 4.01125
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.715
ELB improved by 4.14537
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.712
ELB improved by 4.00271
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.308
ELB improved by 3.40462
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.768
ELB improved by 2.53957
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.029
ELB improved by 1.73955
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.857
ELB improved by 1.17185
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.031
ELB improved by 0.825757
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.402
ELB improved by 0.629449
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.879
ELB improved by 0.522275
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.412
ELB improved by 0.467131
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.974
ELB improved by 0.438197
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.558
ELB improved by 0.415585
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.162
ELB improved by 0.396794
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.77
ELB improved by 0.391762
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.373
ELB improved by 0.397334
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.972
ELB improved by 0.400645
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.573
ELB improved by 0.399323
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.175
ELB improved by 0.397874
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.778
ELB improved by 0.397004
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.381
ELB improved by 0.396802
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.979
ELB improved by 0.402011
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.557
ELB improved by 0.421955
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.094
ELB improved by 0.463173
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.587
ELB improved by 0.506354
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.082
ELB improved by 0.505102
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.623
ELB improved by 0.459394
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.214
ELB improved by 0.408709
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.846
ELB improved by 0.368588
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.507
ELB improved by 0.339133
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.186
ELB improved by 0.320096
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.875
ELB improved by 0.311783
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.564
ELB improved by 0.310606
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.259
ELB improved by 0.305012
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.975
ELB improved by 0.284038
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.724
ELB improved by 0.251431
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.506
ELB improved by 0.217972
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.317
ELB improved by 0.18885
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.152
ELB improved by 0.164493
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.008
ELB improved by 0.144117
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.881
ELB improved by 0.126916
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.769
ELB improved by 0.112247
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.669
ELB improved by 0.0996233
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.581
ELB improved by 0.0886816
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.502
ELB improved by 0.0791558
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.431
ELB improved by 0.070845
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.367
ELB improved by 0.0635902
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.31
ELB improved by 0.0572603
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.258
ELB improved by 0.0517439
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.211
ELB improved by 0.0469459
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.168
ELB improved by 0.0427856
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.129
ELB improved by 0.0391972
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.093
ELB improved by 0.0361301
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.059
ELB improved by 0.0335514
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.028
ELB improved by 0.0314499
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.998
ELB improved by 0.0298451
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.969
ELB improved by 0.0288036
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.941
ELB improved by 0.0284727
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.912
ELB improved by 0.0291484
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.88
ELB improved by 0.031416
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.844
ELB improved by 0.0364412
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.797
ELB improved by 0.0465254
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.732
ELB improved by 0.0658216
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.632
ELB improved by 0.0994265
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.488
ELB improved by 0.144473
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.313
ELB improved by 0.175083
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.147
ELB improved by 0.165769
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.013
ELB improved by 0.13383
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.908
ELB improved by 0.104717
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.825
ELB improved by 0.0837202
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.756
ELB improved by 0.0683211
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.7
ELB improved by 0.0563177
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.653
ELB improved by 0.0466032
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.615
ELB improved by 0.0386445
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.583
ELB improved by 0.0321323
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.556
ELB improved by 0.0268357
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.533
ELB improved by 0.022554
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.514
ELB improved by 0.0191074
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.498
ELB improved by 0.0163373
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.484
ELB improved by 0.0141084
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.471
ELB improved by 0.0123083
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.46
ELB improved by 0.0108466
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.451
ELB improved by 0.00965101
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-894.01
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.244
ELB improved by 318.766
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.599
ELB improved by 57.6445
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.474
ELB improved by 34.1255
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.91
ELB improved by 16.564
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.696
ELB improved by 7.21406
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.876
ELB improved by 3.81985
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.25
ELB improved by 2.62575
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.108
ELB improved by 2.1424
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.181
ELB improved by 1.92627
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.376
ELB improved by 1.80532
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.658
ELB improved by 1.71811
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.012
ELB improved by 1.64565
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.429
ELB improved by 1.58365
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.898
ELB improved by 1.53013
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.421
ELB improved by 1.47775
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.012
ELB improved by 1.40917
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.711
ELB improved by 1.30107
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.57
ELB improved by 1.14101
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.626
ELB improved by 0.943552
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.882
ELB improved by 0.744117
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.307
ELB improved by 0.575089
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.857
ELB improved by 0.44937
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.495
ELB improved by 0.3626
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.191
ELB improved by 0.303804
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.928
ELB improved by 0.263067
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.694
ELB improved by 0.233914
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.481
ELB improved by 0.212728
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.284
ELB improved by 0.19753
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.097
ELB improved by 0.187115
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.916
ELB improved by 0.180678
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.738
ELB improved by 0.177681
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.56
ELB improved by 0.177823
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.379
ELB improved by 0.181028
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.192
ELB improved by 0.187448
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.994
ELB improved by 0.197462
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.783
ELB improved by 0.211676
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.552
ELB improved by 0.230867
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.296
ELB improved by 0.255843
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.009
ELB improved by 0.287236
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.683
ELB improved by 0.325415
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.313
ELB improved by 0.370815
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.888
ELB improved by 0.424667
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.398
ELB improved by 0.489613
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.829
ELB improved by 0.569731
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.159
ELB improved by 0.670081
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.363
ELB improved by 0.795828
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.412
ELB improved by 0.950816
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.276
ELB improved by 1.13596
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.926
ELB improved by 1.34994
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.332
ELB improved by 1.59437
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.48
ELB improved by 1.85153
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.552
ELB improved by 1.92783
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.992
ELB improved by 1.56066
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.924
ELB improved by 1.0672
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.164
ELB improved by 0.760083
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.563
ELB improved by 0.601608
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.093
ELB improved by 0.470052
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.774
ELB improved by 0.318338
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.577
ELB improved by 0.197225
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.452
ELB improved by 0.124919
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.368
ELB improved by 0.084601
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.306
ELB improved by 0.0613324
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.259
ELB improved by 0.0470753
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.221
ELB improved by 0.0377792
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.19
ELB improved by 0.0313552
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.163
ELB improved by 0.0266832
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.14
ELB improved by 0.0231359
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.12
ELB improved by 0.0203471
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.102
ELB improved by 0.0180934
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.086
ELB improved by 0.0162327
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.071
ELB improved by 0.014671
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.058
ELB improved by 0.0133434
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.045
ELB improved by 0.0122035
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.034
ELB improved by 0.0112171
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.024
ELB improved by 0.0103581
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.014
ELB improved by 0.00960615
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-919.212
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.627
ELB improved by 348.585
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.841
ELB improved by 55.7859
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.031
ELB improved by 29.8103
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.179
ELB improved by 13.8521
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.822
ELB improved by 7.35671
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.653
ELB improved by 5.16893
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.191
ELB improved by 4.46214
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.987
ELB improved by 4.20352
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.985
ELB improved by 4.00224
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.346
ELB improved by 3.63876
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.325
ELB improved by 3.02112
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.071
ELB improved by 2.25456
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.515
ELB improved by 1.55586
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.46
ELB improved by 1.05435
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.724
ELB improved by 0.736433
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.188
ELB improved by 0.535671
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.783
ELB improved by 0.404899
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.463
ELB improved by 0.319954
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.198
ELB improved by 0.26515
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.969
ELB improved by 0.22903
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.765
ELB improved by 0.204161
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.579
ELB improved by 0.186208
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.406
ELB improved by 0.17273
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.244
ELB improved by 0.162311
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.09
ELB improved by 0.154071
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.942
ELB improved by 0.147417
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.8
ELB improved by 0.141921
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.663
ELB improved by 0.137257
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.53
ELB improved by 0.133168
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.401
ELB improved by 0.12945
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.275
ELB improved by 0.12594
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.152
ELB improved by 0.122511
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.033
ELB improved by 0.119072
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.918
ELB improved by 0.115558
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.806
ELB improved by 0.111937
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.697
ELB improved by 0.108197
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.593
ELB improved by 0.104351
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.493
ELB improved by 0.100427
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.396
ELB improved by 0.096469
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.304
ELB improved by 0.0925284
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.215
ELB improved by 0.0886635
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.13
ELB improved by 0.0849353
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.049
ELB improved by 0.0814047
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.97
ELB improved by 0.0781299
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.895
ELB improved by 0.0751621
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.823
ELB improved by 0.0725387
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.753
ELB improved by 0.0702732
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.684
ELB improved by 0.068341
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.618
ELB improved by 0.0666656
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.552
ELB improved by 0.065115
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.489
ELB improved by 0.0635213
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.427
ELB improved by 0.0617289
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.367
ELB improved by 0.0596538
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.31
ELB improved by 0.0573182
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.255
ELB improved by 0.0548338
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.203
ELB improved by 0.0523462
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.153
ELB improved by 0.0499786
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.105
ELB improved by 0.0478052
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.059
ELB improved by 0.0458533
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.015
ELB improved by 0.0441201
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.973
ELB improved by 0.0425883
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.931
ELB improved by 0.0412371
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.891
ELB improved by 0.040047
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.852
ELB improved by 0.0390012
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.814
ELB improved by 0.0380857
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.777
ELB improved by 0.0372883
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.74
ELB improved by 0.0365981
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.704
ELB improved by 0.0360044
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.669
ELB improved by 0.0354967
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.634
ELB improved by 0.0350636
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.599
ELB improved by 0.034693
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.565
ELB improved by 0.0343715
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.531
ELB improved by 0.0340845
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.497
ELB improved by 0.0338158
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.463
ELB improved by 0.0335483
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.43
ELB improved by 0.0332639
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.397
ELB improved by 0.0329443
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.365
ELB improved by 0.0325712
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.332
ELB improved by 0.0321278
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.301
ELB improved by 0.031599
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.27
ELB improved by 0.0309728
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.24
ELB improved by 0.0302408
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.21
ELB improved by 0.029399
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.182
ELB improved by 0.0284479
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.154
ELB improved by 0.0273929
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.128
ELB improved by 0.0262436
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.103
ELB improved by 0.0250136
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.079
ELB improved by 0.0237192
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.057
ELB improved by 0.0223788
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.036
ELB improved by 0.0210117
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.016
ELB improved by 0.0196372
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.998
ELB improved by 0.0182735
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.981
ELB improved by 0.016937
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.965
ELB improved by 0.0156423
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.951
ELB improved by 0.0144011
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.938
ELB improved by 0.0132227
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.926
ELB improved by 0.0121137
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.915
ELB improved by 0.0110784
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.905
ELB improved by 0.0101189
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.895
ELB improved by 0.00923542
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.207 0.311 2.507
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.055 | 0.002 | 0.058 | |
| getPIPs | 0.047 | 0.013 | 0.060 | |
| graper | 0.080 | 0.009 | 0.089 | |
| makeExampleData | 0.009 | 0.002 | 0.012 | |
| makeExampleDataWithUnequalGroups | 0.026 | 0.022 | 0.048 | |
| plotELBO | 0.191 | 0.011 | 0.202 | |
| plotGroupPenalties | 0.664 | 0.008 | 0.673 | |
| plotPosterior | 0.470 | 0.004 | 0.475 | |
| predict.graper | 2.043 | 0.010 | 2.055 | |
| print.graper | 0.045 | 0.006 | 0.051 | |