Back to Build/check report for BioC 3.23:   simplified   long
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2025-11-05 11:32 -0500 (Wed, 05 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4818
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 858/2323HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
getDEE2 1.21.0  (landing page)
Mark 0000-0002-7688-6974 Ziemann
Snapshot Date: 2025-11-04 13:40 -0500 (Tue, 04 Nov 2025)
git_url: https://git.bioconductor.org/packages/getDEE2
git_branch: devel
git_last_commit: 5d99578
git_last_commit_date: 2025-10-29 10:59:58 -0500 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published


BUILD results for getDEE2 on nebbiolo1

To the developers/maintainers of the getDEE2 package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/getDEE2.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: getDEE2
Version: 1.21.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data getDEE2
StartedAt: 2025-11-04 17:44:40 -0500 (Tue, 04 Nov 2025)
EndedAt: 2025-11-04 17:46:38 -0500 (Tue, 04 Nov 2025)
EllapsedTime: 118.1 seconds
RetCode: 0
Status:   OK  
PackageFile: getDEE2_1.21.0.tar.gz
PackageFileSize: 23.56 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data getDEE2
###
##############################################################################
##############################################################################


* checking for file ‘getDEE2/DESCRIPTION’ ... OK
* preparing ‘getDEE2’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... OK
Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]],  :
  It is recommended to use ‘given’ instead of ‘middle’.
Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]],  :
  It is recommended to use ‘given’ instead of ‘middle’.
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘getDEE2_1.21.0.tar.gz’