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This page was generated on 2024-12-24 11:47 -0500 (Tue, 24 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4754
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4472
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4426
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4381
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4373
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1958/2274HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleCellAlleleExperiment 1.3.1  (landing page)
Jonas Schuck
Snapshot Date: 2024-12-23 13:40 -0500 (Mon, 23 Dec 2024)
git_url: https://git.bioconductor.org/packages/SingleCellAlleleExperiment
git_branch: devel
git_last_commit: e6fe9a5
git_last_commit_date: 2024-12-20 06:18:19 -0500 (Fri, 20 Dec 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped


BUILD results for SingleCellAlleleExperiment on kunpeng2

To the developers/maintainers of the SingleCellAlleleExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleCellAlleleExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: SingleCellAlleleExperiment
Version: 1.3.1
Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
StartedAt: 2024-12-24 02:30:02 -0000 (Tue, 24 Dec 2024)
EndedAt: 2024-12-24 02:32:38 -0000 (Tue, 24 Dec 2024)
EllapsedTime: 156.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
###
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* checking for file ‘SingleCellAlleleExperiment/DESCRIPTION’ ... OK
* preparing ‘SingleCellAlleleExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘scae_intro.Rmd’ using rmarkdown

Quitting from lines 249-270 [unnamed-chunk-10] (scae_intro.Rmd)
Error: processing vignette 'scae_intro.Rmd' failed with diagnostics:
Problem while computing aesthetics.
ℹ Error occurred in the 2nd layer.
Caused by error in `compute_aesthetics()`:
! Aesthetics are not valid data columns.
✖ The following aesthetics are invalid:
✖ `y = fitted`
ℹ Did you mistype the name of a data column or forget to add `after_stat()`?
--- failed re-building ‘scae_intro.Rmd’

SUMMARY: processing the following file failed:
  ‘scae_intro.Rmd’

Error: Vignette re-building failed.
Execution halted