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This page was generated on 2025-01-11 11:42 -0500 (Sat, 11 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4760
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4479
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4443
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4398
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4391
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1961/2277HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleCellAlleleExperiment 1.3.1  (landing page)
Jonas Schuck
Snapshot Date: 2025-01-10 13:40 -0500 (Fri, 10 Jan 2025)
git_url: https://git.bioconductor.org/packages/SingleCellAlleleExperiment
git_branch: devel
git_last_commit: e6fe9a5
git_last_commit_date: 2024-12-20 06:18:19 -0500 (Fri, 20 Dec 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for SingleCellAlleleExperiment on palomino7

To the developers/maintainers of the SingleCellAlleleExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleCellAlleleExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SingleCellAlleleExperiment
Version: 1.3.1
Command: chmod a+r SingleCellAlleleExperiment -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
StartedAt: 2025-01-10 21:37:56 -0500 (Fri, 10 Jan 2025)
EndedAt: 2025-01-10 21:38:59 -0500 (Fri, 10 Jan 2025)
EllapsedTime: 63.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r SingleCellAlleleExperiment -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
###
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* checking for file 'SingleCellAlleleExperiment/DESCRIPTION' ... OK
* preparing 'SingleCellAlleleExperiment':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'scae_intro.Rmd' using rmarkdown

Quitting from lines 229-238 [unnamed-chunk-8] (scae_intro.Rmd)
Error: processing vignette 'scae_intro.Rmd' failed with diagnostics:
BiocParallel errors
  1 remote errors, element index: 1
  0 unevaluated and other errors
  first remote error:
Error in file(file, "rt"): cannot open the connection

--- failed re-building 'scae_intro.Rmd'

SUMMARY: processing the following file failed:
  'scae_intro.Rmd'

Error: Vignette re-building failed.
Execution halted