| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-01-25 15:38 -0500 (Sat, 25 Jan 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 4658 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" | 4455 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" | 4408 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1332/2286 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.13.1 (landing page) Christian Panse
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.13.1 |
| Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:MsBackendRawFileReader.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings MsBackendRawFileReader_1.13.1.tar.gz |
| StartedAt: 2025-01-25 03:45:07 -0500 (Sat, 25 Jan 2025) |
| EndedAt: 2025-01-25 03:50:53 -0500 (Sat, 25 Jan 2025) |
| EllapsedTime: 346.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:MsBackendRawFileReader.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings MsBackendRawFileReader_1.13.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/MsBackendRawFileReader.Rcheck'
* using R Under development (unstable) (2025-01-21 r87610 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'MsBackendRawFileReader/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'MsBackendRawFileReader' version '1.13.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'MsBackendRawFileReader' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 8.44 2.14 51.15
MsBackendRawFileReader 1.16 0.10 41.68
MsBackendRawFileReader-class 0.83 0.05 12.14
hidden_aliases 0.29 0.04 12.38
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'testthat.R'
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'MsBackendRawFileReader' ... ** this is package 'MsBackendRawFileReader' version '1.13.1' ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
>
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [6.4s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠏ | 10 | spectra_subsetting
⠇ | 19 | spectra_subsetting
⠧ | 28 | spectra_subsetting
⠦ | 37 | spectra_subsetting
⠴ | 46 | spectra_subsetting
⠇ | 59 | spectra_subsetting
⠹ | 73 | spectra_subsetting
⠧ | 88 | spectra_subsetting
⠏ | 100 | spectra_subsetting
⠙ | 112 | spectra_subsetting
⠋ | 121 | spectra_subsetting
⠏ | 130 | spectra_subsetting
⠙ | 142 | spectra_subsetting
⠦ | 157 | spectra_subsetting
⠇ | 169 | spectra_subsetting
⠧ | 178 | spectra_subsetting
⠧ | 188 | spectra_subsetting
⠇ | 199 | spectra_subsetting
⠸ | 214 | spectra_subsetting
⠴ | 226 | spectra_subsetting
⠇ | 239 | spectra_subsetting
⠏ | 250 | spectra_subsetting
⠼ | 265 | spectra_subsetting
⠦ | 277 | spectra_subsetting
⠇ | 289 | spectra_subsetting
⠸ | 304 | spectra_subsetting
⠦ | 317 | spectra_subsetting
⠇ | 329 | spectra_subsetting
⠧ | 338 | spectra_subsetting
⠦ | 347 | spectra_subsetting
⠼ | 355 | spectra_subsetting
⠸ | 364 | spectra_subsetting
⠹ | 373 | spectra_subsetting
⠹ | 383 | spectra_subsetting
⠴ | 396 | spectra_subsetting
⠼ | 405 | spectra_subsetting
⠇ | 419 | spectra_subsetting
⠹ | 433 | spectra_subsetting
⠴ | 446 | spectra_subsetting
⠏ | 460 | spectra_subsetting
⠇ | 469 | spectra_subsetting
⠧ | 478 | spectra_subsetting
⠋ | 491 | spectra_subsetting
⠏ | 500 | spectra_subsetting
⠧ | 508 | spectra_subsetting
⠦ | 517 | spectra_subsetting
⠇ | 529 | spectra_subsetting
⠋ | 541 | spectra_subsetting
⠹ | 553 | spectra_subsetting
⠙ | 562 | spectra_subsetting
⠸ | 574 | spectra_subsetting
⠹ | 583 | spectra_subsetting
⠙ | 592 | spectra_subsetting
⠸ | 604 | spectra_subsetting
⠴ | 616 | spectra_subsetting
⠦ | 627 | spectra_subsetting
⠏ | 640 | spectra_subsetting
⠇ | 649 | spectra_subsetting
⠧ | 658 | spectra_subsetting
⠦ | 667 | spectra_subsetting
⠴ | 676 | spectra_subsetting
⠧ | 688 | spectra_subsetting
⠧ | 698 | spectra_subsetting
⠦ | 707 | spectra_subsetting
⠧ | 718 | spectra_subsetting
⠦ | 727 | spectra_subsetting
⠴ | 736 | spectra_subsetting
⠼ | 745 | spectra_subsetting
⠼ | 755 | spectra_subsetting
⠹ | 763 | spectra_subsetting
⠙ | 772 | spectra_subsetting
⠙ | 782 | spectra_subsetting
⠹ | 793 | spectra_subsetting
⠙ | 802 | spectra_subsetting
⠋ | 811 | spectra_subsetting
⠏ | 820 | spectra_subsetting
⠙ | 832 | spectra_subsetting
⠋ | 841 | spectra_subsetting
⠙ | 852 | spectra_subsetting
⠋ | 861 | spectra_subsetting
⠋ | 871 | spectra_subsetting
⠏ | 880 | spectra_subsetting
⠏ | 890 | spectra_subsetting
⠇ | 899 | spectra_subsetting
⠏ | 910 | spectra_subsetting
⠸ | 924 | spectra_subsetting
⠦ | 937 | spectra_subsetting
⠴ | 946 | spectra_subsetting
⠼ | 955 | spectra_subsetting
⠧ | 968 | spectra_subsetting
⠙ | 982 | spectra_subsetting
⠸ | 994 | spectra_subsetting
⠦ | 1007 | spectra_subsetting
⠋ | 1021 | spectra_subsetting
⠏ | 1030 | spectra_subsetting
⠇ | 1039 | spectra_subsetting
⠧ | 1048 | spectra_subsetting
⠦ | 1057 | spectra_subsetting
⠇ | 1069 | spectra_subsetting
⠸ | 1084 | spectra_subsetting
⠴ | 1096 | spectra_subsetting
⠋ | 1111 | spectra_subsetting
⠸ | 1124 | spectra_subsetting
⠼ | 1135 | spectra_subsetting
⠏ | 1150 | spectra_subsetting
⠙ | 1162 | spectra_subsetting
⠋ | 1171 | spectra_subsetting
⠹ | 1183 | spectra_subsetting
⠙ | 1192 | spectra_subsetting
⠋ | 1201 | spectra_subsetting
⠏ | 1210 | spectra_subsetting
⠸ | 1224 | spectra_subsetting
⠸ | 1234 | spectra_subsetting
⠹ | 1243 | spectra_subsetting
⠧ | 1258 | spectra_subsetting
⠦ | 1267 | spectra_subsetting
⠦ | 1277 | spectra_subsetting
⠇ | 1289 | spectra_subsetting
⠹ | 1303 | spectra_subsetting
⠴ | 1316 | spectra_subsetting
⠦ | 1327 | spectra_subsetting
⠴ | 1336 | spectra_subsetting
⠼ | 1345 | spectra_subsetting
⠼ | 1355 | spectra_subsetting
⠇ | 1369 | spectra_subsetting
⠋ | 1381 | spectra_subsetting
⠏ | 1390 | spectra_subsetting
⠼ | 1405 | spectra_subsetting
⠸ | 1414 | spectra_subsetting
⠹ | 1423 | spectra_subsetting
⠙ | 1432 | spectra_subsetting
⠸ | 1444 | spectra_subsetting
⠴ | 1456 | spectra_subsetting
⠧ | 1468 | spectra_subsetting
⠏ | 1480 | spectra_subsetting
⠇ | 1489 | spectra_subsetting
⠧ | 1498 | spectra_subsetting
⠦ | 1507 | spectra_subsetting
⠴ | 1516 | spectra_subsetting
⠴ | 1526 | spectra_subsetting
⠦ | 1537 | spectra_subsetting
⠇ | 1549 | spectra_subsetting
⠋ | 1561 | spectra_subsetting
⠏ | 1570 | spectra_subsetting
⠙ | 1582 | spectra_subsetting
⠸ | 1594 | spectra_subsetting
⠼ | 1605 | spectra_subsetting
⠼ | 1615 | spectra_subsetting
⠼ | 1625 | spectra_subsetting
⠇ | 1639 | spectra_subsetting
⠧ | 1648 | spectra_subsetting
⠏ | 1660 | spectra_subsetting
⠙ | 1672 | spectra_subsetting
⠋ | 1681 | spectra_subsetting
⠏ | 1690 | spectra_subsetting
⠇ | 1699 | spectra_subsetting
⠧ | 1708 | spectra_subsetting
⠦ | 1717 | spectra_subsetting
⠴ | 1726 | spectra_subsetting
⠦ | 1727 | spectra_subsetting
⠇ | 1729 | spectra_subsetting
⠋ | 1731 | spectra_subsetting
⠹ | 1733 | spectra_subsetting
⠼ | 1735 | spectra_subsetting
⠦ | 1737 | spectra_subsetting
⠇ | 1739 | spectra_subsetting
⠋ | 1741 | spectra_subsetting
⠸ | 1744 | spectra_subsetting
⠴ | 1746 | spectra_subsetting
⠇ | 1749 | spectra_subsetting
⠋ | 1751 | spectra_subsetting
⠹ | 1753 | spectra_subsetting
⠼ | 1755 | spectra_subsetting
⠦ | 1757 | spectra_subsetting
⠇ | 1759 | spectra_subsetting
⠙ | 1762 | spectra_subsetting
⠸ | 1764 | spectra_subsetting
⠴ | 1766 | spectra_subsetting
⠧ | 1768 | spectra_subsetting
⠏ | 1770 | spectra_subsetting
⠙ | 1772 | spectra_subsetting
⠸ | 1774 | spectra_subsetting
⠴ | 1776 | spectra_subsetting
⠧ | 1778 | spectra_subsetting
⠏ | 1780 | spectra_subsetting
⠙ | 1782 | spectra_subsetting
⠸ | 1784 | spectra_subsetting
⠴ | 1786 | spectra_subsetting
⠧ | 1788 | spectra_subsetting
⠋ | 1791 | spectra_subsetting
⠹ | 1793 | spectra_subsetting
⠼ | 1795 | spectra_subsetting
⠴ | 1796 | spectra_subsetting
⠧ | 1798 | spectra_subsetting
⠏ | 1800 | spectra_subsetting
⠙ | 1802 | spectra_subsetting
⠸ | 1804 | spectra_subsetting
⠴ | 1806 | spectra_subsetting
⠧ | 1808 | spectra_subsetting
⠏ | 1810 | spectra_subsetting
⠙ | 1812 | spectra_subsetting
⠸ | 1814 | spectra_subsetting
⠴ | 1816 | spectra_subsetting
⠧ | 1818 | spectra_subsetting
⠏ | 1820 | spectra_subsetting
⠙ | 1822 | spectra_subsetting
⠸ | 1824 | spectra_subsetting
⠴ | 1826 | spectra_subsetting
⠧ | 1828 | spectra_subsetting
⠏ | 1830 | spectra_subsetting
⠙ | 1832 | spectra_subsetting
⠸ | 1834 | spectra_subsetting
⠴ | 1836 | spectra_subsetting
⠧ | 1838 | spectra_subsetting
⠏ | 1840 | spectra_subsetting
⠙ | 1842 | spectra_subsetting
⠸ | 1844 | spectra_subsetting
⠴ | 1846 | spectra_subsetting
⠧ | 1848 | spectra_subsetting
⠏ | 1850 | spectra_subsetting
⠙ | 1852 | spectra_subsetting
⠸ | 1854 | spectra_subsetting
⠴ | 1856 | spectra_subsetting
⠧ | 1858 | spectra_subsetting
⠏ | 1860 | spectra_subsetting
⠙ | 1862 | spectra_subsetting
⠸ | 1864 | spectra_subsetting
⠴ | 1866 | spectra_subsetting
⠧ | 1868 | spectra_subsetting
⠏ | 1870 | spectra_subsetting
⠙ | 1872 | spectra_subsetting
⠸ | 1874 | spectra_subsetting
⠴ | 1876 | spectra_subsetting
⠧ | 1878 | spectra_subsetting
⠇ | 1879 | spectra_subsetting
⠋ | 1881 | spectra_subsetting
⠹ | 1883 | spectra_subsetting
⠼ | 1885 | spectra_subsetting
⠦ | 1887 | spectra_subsetting
⠇ | 1889 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠹ | 1893 | spectra_subsetting
⠼ | 1895 | spectra_subsetting
⠧ | 1898 | spectra_subsetting
⠏ | 1900 | spectra_subsetting
⠹ | 1903 | spectra_subsetting
⠼ | 1905 | spectra_subsetting
⠧ | 1908 | spectra_subsetting
⠇ | 1909 | spectra_subsetting
⠋ | 1911 | spectra_subsetting
⠹ | 1913 | spectra_subsetting
⠼ | 1915 | spectra_subsetting
⠦ | 1917 | spectra_subsetting
⠇ | 1919 | spectra_subsetting
⠋ | 1921 | spectra_subsetting
⠹ | 1923 | spectra_subsetting
⠼ | 1925 | spectra_subsetting
⠦ | 1927 | spectra_subsetting
⠇ | 1929 | spectra_subsetting
⠋ | 1931 | spectra_subsetting
⠸ | 1934 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠧ | 1938 | spectra_subsetting
⠋ | 1941 | spectra_subsetting
⠹ | 1943 | spectra_subsetting
⠼ | 1945 | spectra_subsetting
⠦ | 1947 | spectra_subsetting
⠇ | 1949 | spectra_subsetting
⠋ | 1951 | spectra_subsetting
⠹ | 1953 | spectra_subsetting
⠼ | 1955 | spectra_subsetting
⠦ | 1957 | spectra_subsetting
⠇ | 1959 | spectra_subsetting
⠋ | 1961 | spectra_subsetting
⠹ | 1963 | spectra_subsetting
⠼ | 1965 | spectra_subsetting
⠦ | 1967 | spectra_subsetting
⠇ | 1969 | spectra_subsetting
⠋ | 1971 | spectra_subsetting
⠹ | 1973 | spectra_subsetting
⠼ | 1975 | spectra_subsetting
⠦ | 1977 | spectra_subsetting
⠇ | 1979 | spectra_subsetting
⠋ | 1981 | spectra_subsetting
⠹ | 1983 | spectra_subsetting
⠼ | 1985 | spectra_subsetting
⠴ | 1986 | spectra_subsetting
⠧ | 1988 | spectra_subsetting
⠏ | 1990 | spectra_subsetting
⠙ | 1992 | spectra_subsetting
⠸ | 1994 | spectra_subsetting
⠴ | 1996 | spectra_subsetting
⠧ | 1998 | spectra_subsetting
⠏ | 2000 | spectra_subsetting
⠙ | 2002 | spectra_subsetting
⠸ | 2004 | spectra_subsetting
⠴ | 2006 | spectra_subsetting
⠧ | 2008 | spectra_subsetting
⠏ | 2010 | spectra_subsetting
⠙ | 2012 | spectra_subsetting
⠸ | 2014 | spectra_subsetting
⠴ | 2016 | spectra_subsetting
⠧ | 2018 | spectra_subsetting
⠏ | 2020 | spectra_subsetting
⠹ | 2023 | spectra_subsetting
⠼ | 2025 | spectra_subsetting
⠦ | 2027 | spectra_subsetting
⠇ | 2029 | spectra_subsetting
⠋ | 2031 | spectra_subsetting
⠹ | 2033 | spectra_subsetting
⠼ | 2035 | spectra_subsetting
⠦ | 2037 | spectra_subsetting
⠇ | 2039 | spectra_subsetting
⠋ | 2041 | spectra_subsetting
⠹ | 2043 | spectra_subsetting
⠼ | 2045 | spectra_subsetting
⠦ | 2047 | spectra_subsetting
⠇ | 2049 | spectra_subsetting
⠋ | 2051 | spectra_subsetting
⠹ | 2053 | spectra_subsetting
⠼ | 2055 | spectra_subsetting
⠦ | 2057 | spectra_subsetting
⠇ | 2059 | spectra_subsetting
⠋ | 2061 | spectra_subsetting
⠹ | 2063 | spectra_subsetting
⠼ | 2065 | spectra_subsetting
⠦ | 2067 | spectra_subsetting
⠇ | 2069 | spectra_subsetting
⠋ | 2071 | spectra_subsetting
⠹ | 2073 | spectra_subsetting
⠼ | 2075 | spectra_subsetting
⠦ | 2077 | spectra_subsetting
⠇ | 2079 | spectra_subsetting
⠋ | 2081 | spectra_subsetting
⠹ | 2083 | spectra_subsetting
⠼ | 2085 | spectra_subsetting
⠦ | 2087 | spectra_subsetting
⠇ | 2089 | spectra_subsetting
⠋ | 2091 | spectra_subsetting
⠹ | 2093 | spectra_subsetting
⠴ | 2096 | spectra_subsetting
⠧ | 2098 | spectra_subsetting
⠏ | 2100 | spectra_subsetting
⠙ | 2102 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠦ | 2107 | spectra_subsetting
⠇ | 2109 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠙ | 2112 | spectra_subsetting
⠸ | 2114 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠧ | 2118 | spectra_subsetting
⠋ | 2121 | spectra_subsetting
⠹ | 2123 | spectra_subsetting
⠴ | 2126 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠏ | 2130 | spectra_subsetting
⠙ | 2132 | spectra_subsetting
⠸ | 2134 | spectra_subsetting
⠴ | 2136 | spectra_subsetting
⠧ | 2138 | spectra_subsetting
⠏ | 2140 | spectra_subsetting
⠹ | 2143 | spectra_subsetting
⠼ | 2145 | spectra_subsetting
⠦ | 2147 | spectra_subsetting
⠇ | 2149 | spectra_subsetting
⠋ | 2151 | spectra_subsetting
⠸ | 2154 | spectra_subsetting
⠴ | 2156 | spectra_subsetting
⠧ | 2158 | spectra_subsetting
⠏ | 2160 | spectra_subsetting
⠙ | 2162 | spectra_subsetting
⠸ | 2164 | spectra_subsetting
⠴ | 2166 | spectra_subsetting
⠧ | 2168 | spectra_subsetting
⠏ | 2170 | spectra_subsetting
⠙ | 2172 | spectra_subsetting
⠸ | 2174 | spectra_subsetting
⠴ | 2176 | spectra_subsetting
⠧ | 2178 | spectra_subsetting
⠏ | 2180 | spectra_subsetting
⠙ | 2182 | spectra_subsetting
⠸ | 2184 | spectra_subsetting
⠴ | 2186 | spectra_subsetting
⠧ | 2188 | spectra_subsetting
⠏ | 2190 | spectra_subsetting
⠙ | 2192 | spectra_subsetting
⠸ | 2194 | spectra_subsetting
⠦ | 2197 | spectra_subsetting
⠇ | 2199 | spectra_subsetting
⠋ | 2201 | spectra_subsetting
⠹ | 2203 | spectra_subsetting
⠼ | 2205 | spectra_subsetting
⠦ | 2207 | spectra_subsetting
⠇ | 2209 | spectra_subsetting
⠋ | 2211 | spectra_subsetting
⠹ | 2213 | spectra_subsetting
⠼ | 2215 | spectra_subsetting
⠦ | 2217 | spectra_subsetting
⠇ | 2219 | spectra_subsetting
⠋ | 2221 | spectra_subsetting
⠹ | 2223 | spectra_subsetting
⠼ | 2225 | spectra_subsetting
⠦ | 2227 | spectra_subsetting
⠇ | 2229 | spectra_subsetting
⠋ | 2231 | spectra_subsetting
⠹ | 2233 | spectra_subsetting
⠼ | 2235 | spectra_subsetting
⠦ | 2237 | spectra_subsetting
⠇ | 2239 | spectra_subsetting
⠋ | 2241 | spectra_subsetting
⠹ | 2243 | spectra_subsetting
⠼ | 2245 | spectra_subsetting
⠦ | 2247 | spectra_subsetting
⠇ | 2249 | spectra_subsetting
⠋ | 2251 | spectra_subsetting
⠹ | 2253 | spectra_subsetting
⠼ | 2255 | spectra_subsetting
⠦ | 2257 | spectra_subsetting
⠇ | 2259 | spectra_subsetting
⠋ | 2261 | spectra_subsetting
⠹ | 2263 | spectra_subsetting
⠼ | 2265 | spectra_subsetting
⠦ | 2267 | spectra_subsetting
⠇ | 2269 | spectra_subsetting
⠋ | 2271 | spectra_subsetting
⠹ | 2273 | spectra_subsetting
⠼ | 2275 | spectra_subsetting
⠦ | 2277 | spectra_subsetting
⠇ | 2279 | spectra_subsetting
⠋ | 2281 | spectra_subsetting
⠹ | 2283 | spectra_subsetting
⠼ | 2285 | spectra_subsetting
⠦ | 2287 | spectra_subsetting
⠇ | 2289 | spectra_subsetting
⠋ | 2291 | spectra_subsetting
⠹ | 2293 | spectra_subsetting
⠴ | 2296 | spectra_subsetting
⠧ | 2298 | spectra_subsetting
⠏ | 2300 | spectra_subsetting
⠹ | 2303 | spectra_subsetting
⠇ | 2309 | spectra_subsetting
⠸ | 2314 | spectra_subsetting
⠏ | 2320 | spectra_subsetting
⠴ | 2326 | spectra_subsetting
⠏ | 2330 | spectra_subsetting
⠸ | 2334 | spectra_subsetting
✔ | 2334 | spectra_subsetting [60.6s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠦ | 27 | spectra_variables
⠇ | 29 | spectra_variables
⠋ | 31 | spectra_variables
⠹ | 43 | spectra_variables
⠼ | 55 | spectra_variables
✔ | 1 62 | spectra_variables [21.2s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 88.2 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2400 ]
>
> proc.time()
user system elapsed
74.87 4.68 149.28
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 0.83 | 0.05 | 12.14 | |
| MsBackendRawFileReader | 1.16 | 0.10 | 41.68 | |
| hidden_aliases | 0.29 | 0.04 | 12.38 | |
| ioBenchmark | 8.44 | 2.14 | 51.15 | |