Package: VanillaICE

Version: 1.45.0

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data VanillaICE

StartedAt: 2019-04-08 19:37:29 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 19:37:46 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 16.9 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data VanillaICE
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* checking for file ‘VanillaICE/DESCRIPTION’ ... OK
* preparing ‘VanillaICE’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
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* installing *source* package ‘VanillaICE’ ...
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include  -fPIC  -Wall -g -O2  -c rinit.c -o rinit.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include  -fPIC  -Wall -g -O2  -c viterbi.c -o viterbi.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o VanillaICE.so rinit.o viterbi.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/RtmpB447mp/Rinst1195e1ac2feb8/00LOCK-VanillaICE/00new/VanillaICE/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses,  : 
  The prototype for class “SnpDataFrame” has undefined slot(s): 'isSnp'
Error: unable to load R code in package ‘VanillaICE’
Execution halted
ERROR: lazy loading failed for package ‘VanillaICE’
* removing ‘/private/tmp/RtmpB447mp/Rinst1195e1ac2feb8/VanillaICE’
      -----------------------------------
ERROR: package installation failed