Leif Varemo
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/piano |
| Branch: RELEASE_3_8 |
| Last Commit: 5041f48 |
| Last Changed Date: 2018-10-30 11:41:51 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:22:49 -0400 (Sat, 13 Apr 2019).
| Package 1157/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| piano 1.22.0 Leif Varemo
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: piano |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/piano_1.22.0.tar.gz && rm -rf piano.buildbin-libdir && mkdir piano.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=piano.buildbin-libdir piano_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL piano_1.22.0.zip && rm piano_1.22.0.tar.gz piano_1.22.0.zip |
| StartedAt: 2019-04-12 19:08:50 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:10:38 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 107.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/piano_1.22.0.tar.gz && rm -rf piano.buildbin-libdir && mkdir piano.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=piano.buildbin-libdir piano_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL piano_1.22.0.zip && rm piano_1.22.0.tar.gz piano_1.22.0.zip
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install for i386
* installing *source* package 'piano' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'piano'
finding HTML links ... done
GSAheatmap html
GSAsummaryTable html
consensusHeatmap html
consensusScores html
diffExp html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/diffExp.Rd:75: file link 'limma' in package 'limma' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/diffExp.Rd:143: file link 'limma' in package 'limma' does not exist and so has been treated as a topic
extractFactors html
geneSetSummary html
gsa_input html
gsa_results html
loadGSC html
loadMAdata html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/loadMAdata.Rd:129: file link 'yeast2.db' in package 'yeast2.db' does not exist and so has been treated as a topic
networkPlot html
piano-package html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/piano-package.Rd:25: file link 'limma-package' in package 'limma' does not exist and so has been treated as a topic
polarPlot html
runGSA html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/runGSA.Rd:250: file link 'HTSanalyzeR-package' in package 'HTSanalyzeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpwzmoM5/R.INSTALL17e44f40498b/piano/man/runGSA.Rd:252: file link 'limma' in package 'limma' does not exist and so has been treated as a topic
runGSAhyper html
runQC html
writeFilesForKiwi html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'piano' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'piano' as piano_1.22.0.zip
* DONE (piano)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'piano' successfully unpacked and MD5 sums checked
In R CMD INSTALL